KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:23 2014 Check: 00 .. Name: ENSTTRP00000007444/1-560 Len: 591 Check: 5429 Weight: 1.00 Name: ENSP00000360549/1-560 Len: 591 Check: 5245 Weight: 1.00 Name: ENSBTAP00000016615/1-562 Len: 591 Check: 3363 Weight: 1.00 Name: bmy_15166T0/1-504 Len: 591 Check: 452 Weight: 1.00 Name: BACU000256/1-574 Len: 591 Check: 1844 Weight: 1.00 // 1 50 ENSTTRP00000007444/1-560 ---------- ----MVLGAI LARGRDVCRR NGLLILSVLS VTVGCLLGFF ENSP00000360549/1-560 ---------- ----MVPHAI LARGRDVCRR NGLLILSVLS VIVGCLLGFF ENSBTAP00000016615/1-562 ---------- --LAMVLGAI LARGRDVCKR NGLLILSVLS VTVGCLLGFF bmy_15166T0/1-504 ---------- ---------- ---------- ---------- ---------- BACU000256/1-574 MEWCCAPGQQ AGLAMVLGAI LARGRDVCRR NGLLILSVLS VTVGCLLGFF 51 100 ENSTTRP00000007444/1-560 LRTRHLSPQE ISYFQFPGEL LMRMLKMLIL PLVVSSLMSG LASLDAKTSS ENSP00000360549/1-560 LRTRRLSPQE ISYFQFPGEL LMRMLKMMIL PLVVSSLMSG LASLDAKTSS ENSBTAP00000016615/1-562 LRTRRLSPQE ISYFQFPGEL LMRMLKMLIL PLVVSSLMSG LASLDAKTSS bmy_15166T0/1-504 ---------- ---------- ---------- -------MSG LASLDAKTSS BACU000256/1-574 LRTRHLSPQE ISYFQFPGEL LMRMLKMLIL PLVVSSLMSG LASLDAKTSS 101 150 ENSTTRP00000007444/1-560 RLGILTVAYY LWTTFMAVIV GIVMVSIIHP GSVAQKETTE HSGKPIMSSA ENSP00000360549/1-560 RLGVLTVAYY LWTTFMAVIV GIFMVSIIHP GSAAQKETTE QSGKPIMSSA ENSBTAP00000016615/1-562 RLGILTVAYY LWTTFVAVIV GIIMVSIIHP GGAAQKETTE QSGKPIMSSA bmy_15166T0/1-504 RLGILTVAYY LWTTFVAVIV GIVMVSIIHP GSAAQKETTE HSGKPIMSSA BACU000256/1-574 RLGILTVAYY LWTTFVAVIV GIVMVSIIHP GSAAQKETTE HSGKPIMSSA 151 200 ENSTTRP00000007444/1-560 DPLLDLIRNM FPANLVEATF KQYRTKTTPV VKSPKVAPEE APPRRILIYG ENSP00000360549/1-560 DALLDLIRNM FPANLVEATF KQYRTKTTPV VKSPKVAPEE APPRRILIYG ENSBTAP00000016615/1-562 DPLLDLIRNM FPANLVEATF KQYRTKTTPV VKSPTVASEE APSRRILIYG bmy_15166T0/1-504 DPLLDLIRNM FPANLVEATF KQYRTKTTPV VKSPKVAPEE APPRRILIYG BACU000256/1-574 DPLLDLIRNM FPANLVEATF KQYRTKTTPV VKSPKVAPEE APPRRILIYG 201 250 ENSTTRP00000007444/1-560 VQEENGSRVQ NFALDLTPPP EVIYKSEPGT SDGMNVLGIV IFSATMGIML ENSP00000360549/1-560 VQEENGSHVQ NFALDLTPPP EVVYKSEPGT SDGMNVLGIV FFSATMGIML ENSBTAP00000016615/1-562 VQGENDSRVQ NFALDLTPPP EVVYKSEPGT SDGMNVLGIV IFSATMGIML bmy_15166T0/1-504 VQEENGSRVQ NFALDLTPPP EVIYKSEPGT SDGMNVLGIV IFSATMGIML BACU000256/1-574 VQEENGSRVQ NFALDLTPPP EVVYKSEPGT SDGMNVLGIV IFSATMGIML 251 300 ENSTTRP00000007444/1-560 GRMGDSGTPL VSFCQCLNES VMKIVAVAVW YFPFGIVFLI AGKILEMDNP ENSP00000360549/1-560 GRMGDSGAPL VSFCQCLNES VMKIVAVAVW YFPFGIVFLI AGKILEMDDP ENSBTAP00000016615/1-562 GRMGDSGAPL VSFCQCLNES VMKIVAVAVW YFPFGIVFLI AGKILEMDNP bmy_15166T0/1-504 GRMGDSGAPL VSFCQCLNES VMKIVAVAVW YFPFGIVFLI AGKILEMDNP BACU000256/1-574 GRMGDSGAPL VSFCQCLNES VMKIVAVAVW YFPFGIVFLI AGKILEMDNP 301 350 ENSTTRP00000007444/1-560 TTVGKKLGFY AVTVVCGLVV HGLFILPLLY FFITKKNPIV FIRGILQALL ENSP00000360549/1-560 RAVGKKLGFY SVTVVCGLVL HGLFILPLLY FFITKKNPIV FIRGILQALL ENSBTAP00000016615/1-562 TTVGKKLGFY AVTVVCGLVV HGLFILPLLY FFITKKNPIV FIRGILQALL bmy_15166T0/1-504 TTVGKKLGFY AATVVCGLVV HGLFILPLLY FFITKKNPIV FIRGILQALL BACU000256/1-574 TTVGKKLGFY AATVVCGLVV HGLFILPLLY FFITKKNPIV FIRGILQALL 351 400 ENSTTRP00000007444/1-560 IALATSSSSA TLPITFKCLL ENNHIDRRIA RFVLPVGATI NMDGTALYEA ENSP00000360549/1-560 IALATSSSSA TLPITFKCLL ENNHIDRRIA RFVLPVGATI NMDGTALYEA ENSBTAP00000016615/1-562 IALATSSSSA TLPITFKCLL ENNHIDRRIA RFVLPVGATI NMDGTALYEA bmy_15166T0/1-504 IALATSSSSA TLPITFKCLL ENNHIDRRIA RFVLPVGATI NMDGTALYEA BACU000256/1-574 IALATSSSSA TLPITFKCLL ENNHIDRRIA RFVLPVGATI NMDGTALYEA 401 450 ENSTTRP00000007444/1-560 VAAIFIAQVN NYDLDFGQII TIXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000360549/1-560 VAAIFIAQVN NYELDFGQII TISITATAAS IGAAGIPQAG LVTMVIVLTS ENSBTAP00000016615/1-562 VAAIFIAQVN NYELDFGQII TISITATAAS IGAAGIPQAG LVTMVIVLTS bmy_15166T0/1-504 VAAIFIAQVN NYELDFGQII TISITATAAS IGAAGIPQAG LVTMVIVLTS BACU000256/1-574 VAAIFIAQVN NYELDFGQII TISITATAAS IGAAGIPQAG LVTMVIVLTS 451 500 ENSTTRP00000007444/1-560 XXXXXXXXXX XXXXXXXX-- ---------- -----DRFRT MINVLGDALA ENSP00000360549/1-560 VGLPTDDITL IIAVDWAL-- ---------- -----DRFRT MINVLGDALA ENSBTAP00000016615/1-562 VGLPTDDITL IIAIDWAL-- ---------- -----DRFRT MINVLGDALA bmy_15166T0/1-504 VGLPTDDITL IIAVDWALSP YSRGPAAHCP PWPTRDRFRT MINVLGDALA BACU000256/1-574 VGLPTDDITL IIAVDWAL-- ---------- -----DRFRT MINVLGDALA 501 550 ENSTTRP00000007444/1-560 AGIMAHVCRK DFTQDTGTEK LPPCETSPVS LQEIVATQQN GCVKSVAEAS ENSP00000360549/1-560 AGIMAHICRK DFARDTGTEK LLPCETKPVS LQEIVAAQQN GCVKSVAEAS ENSBTAP00000016615/1-562 AGIMAHVCRK DFAQDTGTEK PLPCETKPVS LQEIVATQQN GCVKSVAEAA bmy_15166T0/1-504 AGIMAHVCRK DFAQDTGTEK LPPCETKPVS LQEIVATQQN GCVKSVAEAS BACU000256/1-574 AGIMAHVCRK DFAQDTGTEK LLPCETKPVS LQEIVATQQN GCVKSVAEAS 551 600 ENSTTRP00000007444/1-560 ELTLGPTCPH HVPIQVEQDE EPAAASLDHC TIEISELETN V ENSP00000360549/1-560 ELTLGPTCPH HVPVQVEQDE ELPAASLNHC TIQISELETN V ENSBTAP00000016615/1-562 ELTLGPSCPH HVPVQVEQDE EPATASLDHC TIEISELETN V bmy_15166T0/1-504 ELTLGPTCPH HVPIQVEQDE EPAAASLDHC TIEISELETN V BACU000256/1-574 ELTLGPTCPH HVPIQVEQDE EPAAASLDHC TIEISELETN V