KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:25 2014 Check: 00 .. Name: ENSP00000365411/1-666 Len: 671 Check: 2592 Weight: 1.00 Name: ENSTTRP00000002893/1-659 Len: 671 Check: 8749 Weight: 1.00 Name: ENSBTAP00000016629/1-658 Len: 671 Check: 4816 Weight: 1.00 Name: bmy_07522T0/1-496 Len: 671 Check: 740 Weight: 1.00 Name: BACU001741/1-504 Len: 671 Check: 6880 Weight: 1.00 // 1 50 ENSP00000365411/1-666 MGESSEDIDQ MFSTLLGEMD LLTQSLGVDT LPPPDPNPPR AEFNYSVGFK ENSTTRP00000002893/1-659 MGESNEDIDQ MFSNLLGEMD LLTQSLGVDT VPPPEPKPSR AEFNYSVGFK ENSBTAP00000016629/1-658 MGESNEDIDQ MFSNLLGEMD LLTQSLGVDI LPPPDPKPPR AEFNYSVGFK bmy_07522T0/1-496 MGESNEDIDQ MFSNLLGEMD LLTQSLGVDT LPPPEPKPPR AEFNYSVGFK BACU001741/1-504 ---------- --MNNFGGWD LFSQSLGVDT LPPPEPKPPR AEFNYSVGFK 51 100 ENSP00000365411/1-666 DLNESLNALE DQDLDALMAD LVADISEAEQ RTIQAQKESL QNQHHSASLQ ENSTTRP00000002893/1-659 DLNESLNALE DQDLDALMAD LVADIREAEQ RTIQAQKESS QSRPHSASLD ENSBTAP00000016629/1-658 DLNESLNALE DQDLDALMAD LVADISEAEQ RTIQAQKESP QKQPPSASLC bmy_07522T0/1-496 DLNESLNALE DQDLDALMAD LVADIREAEQ RTIQAQKESS QSRPYSASLD BACU001741/1-504 DLNESLNALE DQDLDALMAD LVADIREAEQ RTIQAQKESS QSRPYSASLD 101 150 ENSP00000365411/1-666 ASIFSGAASL GYGTNVAATG ISQYEDDLPP PPADPVLDLP LPPPPPEPLS ENSTTRP00000002893/1-659 IPSFSGAASL GYTANVAAPS ISQYEDDLPP PPADPMLDLP LPPPAPEPLS ENSBTAP00000016629/1-658 VPSFSDTASL GYGANVAAP- -SQYDDDLPP PPADPMLDLP LPPPPPGPIS bmy_07522T0/1-496 VPSFSGAASL GYAANVAAPS ISQYEDDLPP PPADPMLDLP LPPPAPEPLS BACU001741/1-504 VPSFSGAASL GYAANVAAPS ISQYEDDLPP PPADPMLDLP LPPPAPEPLS 151 200 ENSP00000365411/1-666 QEEEEAQAKA DKIKLALEKL KEAKVKKLVV KVHMNDNSTK SLMVDERQLA ENSTTRP00000002893/1-659 QEEEEAQAKA DKIKLALEKL KEAKVKKLVV KVHMNDNSTK SLMVDERQLA ENSBTAP00000016629/1-658 QEEEEAQAKA DKIKLALEKL KEAKVKKLVV KILMNDNSSK SLMVDERQLA bmy_07522T0/1-496 QEEEEAQAKA DKIKLALEKL KEAKVKKLVV KVHMNDNSTK SLMVDERQLA BACU001741/1-504 QEEEEAQAKA DKIKLALEKL KEAKVKKLVV KVHMNDNSTK SLMVDERQLA 201 250 ENSP00000365411/1-666 RDVLDNLFEK THCDCNVDWC LYEIYPELQI ERFFEDHENV VEVLSDWTRD ENSTTRP00000002893/1-659 RDVLDNLFEK THCDCNVDWC LYEIYPELQI ERFFEDHENV VEVLSDWTRD ENSBTAP00000016629/1-658 RDVLDNLFEK THCDCNVDWC LYEIYPELQI ERFFEDHENV VEILSDWTRD bmy_07522T0/1-496 RDVLDNLFEK THCDCNVDWC LYEIYPELQI ERFFEDHENV VEVLSDWTRD BACU001741/1-504 RDVLDNLFEK THCDCNVDWC LYEIYPELQI ERFFEDHENV VEVLSDWTRD 251 300 ENSP00000365411/1-666 TENKILFLEK EEKYAVFKNP QNFYLDNRGK KESKETNEKM NAKNKESLLE ENSTTRP00000002893/1-659 TENKVLFLEK EEKYAVFKNP QXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000016629/1-658 TENKLLFLEK EEKYAVFKNP QNFYLDNKGK KENKETNEKM NAKNKESLLE bmy_07522T0/1-496 TENKVLFLEK EEKYAVFKNP QNFYLDNKGK KESKETNEKM NAKNKESLLE BACU001741/1-504 TENKVLFLEK EEKYAVFKNP QNFYLDNKGK KENKETNEKM NAKNKESLLE 301 350 ENSP00000365411/1-666 ESFCGTSIIV PELEGALYLK EDGKKSWKRR YFLLRASGIY YVPKGKTKTS ENSTTRP00000002893/1-659 ESFCGTSIIV PELEGALYLK EDGKKSWKRR YFLLRASGIY YVPKGKTKTS ENSBTAP00000016629/1-658 ESFCGTSVIV PELEGALYLK EDGKKSWKRR YFLLRASGIY YVPKGKTKTS bmy_07522T0/1-496 ESFCGTSIIV PELEGALYLK EDGKKSWKRR YFLLRASGIY YVPKGKTKTS BACU001741/1-504 ESFCGTSIIV PELEGALYLK EDGKKSWKRR YFLLRASGIY YVPKGKTKTS 351 400 ENSP00000365411/1-666 RDLACFIQFE NVNIYYGTQH KMKYKAPTDY CFVLKHPQIQ KESQYIKYLC ENSTTRP00000002893/1-659 RDLACFIQFE NVNIYYGIQC KIKYKAPTDY CFVLKHPQIQ KESQYIKYLC ENSBTAP00000016629/1-658 RDLACFIQFE NVNIYYGIQC KMKYKAPTDY CFVLKHPQIQ KESQYIKYLC bmy_07522T0/1-496 RDLACFIQFE NVNIYYGIQC KMKYKAPTDY CFVVKHPQIQ KESQYIKYLC BACU001741/1-504 RDLACFIQFE NVNIYYGIQC KMKYKAPTDY CFVLKHPQIQ KESQYIKYLC 401 450 ENSP00000365411/1-666 CDDTRTLNQW VMGIRIAKYG KTLYDNYQRA VAKAGLASRW TNLGTVNAAA ENSTTRP00000002893/1-659 CDDARMLNQW VTGIRIAKYG KTLYDSYQRA MARAGLASRW TNLGTVNAAP ENSBTAP00000016629/1-658 CDDARALSQW VTGIRIAKYG KTLYDNYQRA MARAGLASRW TNLGTVNAAP bmy_07522T0/1-496 CDDARMLNQW VTGIRIAKYG KTLYDNYQRA MARAGLASRW TNLGTVNAAP BACU001741/1-504 CDDARMLNQW VTGIRIAKYG KTLYDNYQRA MARAGLASRW TNLGTVNAAP 451 500 ENSP00000365411/1-666 PAQPSTG-PK TGTTQPNGQI PQATHSVSAV LQEAQRHAET SKDKKPALG- ENSTTRP00000002893/1-659 PAPSSTG-VK TGTTQANGQI PQAAHSMSTV LGEAQRHVET TKDKK--SGL ENSBTAP00000016629/1-658 PAPPSTG-VK TGTTQANGQL PQATQSMNTA LGEDWRQLET TKDKKPGPGL bmy_07522T0/1-496 PAPPSTGTLQ RGESDTCSEL RGCVQTYLMY FIETELCRHC TE-------- BACU001741/1-504 PAPPSTG-VK TGTTQANGQI PQAAHSMSTV LGEAQRHVET TK-------- 501 550 ENSP00000365411/1-666 NHHDPAVPRA PHAPKSSL-P PPPPVRRSSD T-SGSPATPL KAKGTGGGGL ENSTTRP00000002893/1-659 GSHDP-APRA QTLPMSSL-P PPPPVRRSSE VGCSSPGTPP KVKGT-AAGF ENSBTAP00000016629/1-658 GSHDPGAPRA QPLPKSSLPP PPPPVRRSSD VGGGSPGTPP KAKGA-AARF bmy_07522T0/1-496 ---------- ---------- ---------- ---------- ---------- BACU001741/1-504 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000365411/1-666 PAPPDDFLPP -PPPPPPLDD PELPPPPPDF MEPPPDFVPP PPPSYAGIAG ENSTTRP00000002893/1-659 PAPPHDLLPP -PPPPPPLED DELPPPPPDF SDAPPDFVPP PPPPSFAGDA ENSBTAP00000016629/1-658 PAPPDDFLPP PPPPPPPLQD DELPPPPPDF NDAPPDFVPP PPPSF----A bmy_07522T0/1-496 ------YIPS ---------- ---------- ---------- ---------- BACU001741/1-504 ------LLKS --------DN LILQCTFSDY ---------- ---------- 601 650 ENSP00000365411/1-666 SELPPPPPPP PAPAPAPVPD SARPPPAVAK RPPVPPKRQE NPGHPGGAGG ENSTTRP00000002893/1-659 GSSLPPPPPP ----PALVPE AAKPTPVVAK RPPAPPKRQA NPGPPGG-GG ENSBTAP00000016629/1-658 EDLPPPPPPP ----PALAPE SVRTPPVVVK RPPPPPKRQE NPGPPGG-GG bmy_07522T0/1-496 ---------- ---------- ---------- ---------- ---------- BACU001741/1-504 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000365411/1-666 GEQDFMSDLM KALQKKRGNV S ENSTTRP00000002893/1-659 GEQDFMSDLM KALQKKRSNM S ENSBTAP00000016629/1-658 GEQDFMSDLM KALQKKRGNV S bmy_07522T0/1-496 ---------- ---------- - BACU001741/1-504 ----YFHGFC NAN------- -