KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:28 2014 Check: 00 .. Name: ENSP00000356713/1-489 Len: 524 Check: 6233 Weight: 1.00 Name: ENSBTAP00000016650/1-466 Len: 524 Check: 5093 Weight: 1.00 Name: ENSTTRP00000015393/1-463 Len: 524 Check: 2294 Weight: 1.00 Name: bmy_14478T0/1-467 Len: 524 Check: 4494 Weight: 1.00 Name: BACU014337/1-417 Len: 524 Check: 8419 Weight: 1.00 // 1 50 ENSP00000356713/1-489 ---------- ---------- ---------- ---MALLFLL PLVMQGVSRA ENSBTAP00000016650/1-466 ---------- ---------- ---------- ---MALLFFL VPVLLTGSWV ENSTTRP00000015393/1-463 ---------- ---------- ---------- ---------- --TVQAGSWA bmy_14478T0/1-467 MVCGGGNDAR PRPEGRAGGR TQFWAAPESV RSSMDLFLFL VLIVQAGSWA BACU014337/1-417 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000356713/1-489 EMGTADL-GP SSVPTPTNVT IESYNMNPIV YWEYQIMPQV PVFTVEVKNY ENSBTAP00000016650/1-466 EMSAAIP-GL SSVPPPTNVT IQAYNLNTVI FWDYPVILQS PMFTVQVMNY ENSTTRP00000015393/1-463 EMGAADSCKL SSVPTPTNLT IEAYNLNTVL FWDYPVMPRS PVFTVQVMTY bmy_14478T0/1-467 EMGAADQ-KL STVPTPTNLR IEAYNLNTVL FWDYPIMPRS PVFTVQVMTY BACU014337/1-417 ---------- ---------- ---------- ------MPRS PVFTVQVMTY 101 150 ENSP00000356713/1-489 GVKNSEWIDA CINISHHYCN ISDHVGDPSN SLWVRVKARV GQKESAYAKS ENSBTAP00000016650/1-466 --EDGKWIDA C-NTSDHSCN IFSVINDPSS SVWGRVKVRV GQEESVYAQS ENSTTRP00000015393/1-463 SFRDGQWIDA C-NTSHHSCN IFSIIDDPSS PLWARVKARL GQEESVYAQS bmy_14478T0/1-467 --RDGKWIDA C-NTSHHSCN IFSIIDDPSS PLWARVKARL GQEESVYAQS BACU014337/1-417 --RDGQWIDA C-NTSHHSCN IFSIIDDPSS PLWARVKARL GQEESVYAQS 151 200 ENSP00000356713/1-489 EEFAVCRDGK IGPPKLDIRK EEKQIMIDIF HPSVFVNGDE QEVDYDPETT ENSBTAP00000016650/1-466 KEFILCKEGK VGPPKLGIRK KENQIIVDIF HPLITVNGKE PEAMYDDENT ENSTTRP00000015393/1-463 REFILCKEGK IGPPKLVITK KEDQIIVDIF HPLITVNENE PEAIYDDENT bmy_14478T0/1-467 REFILCKEGK IGPPKLGIRK KEDQIIVDIF HPLITVNENE PEAIYDDENT BACU014337/1-417 REFILCKEGK IGPPKLGIRK KEDQIIVDIF HPLITVNENE PEAIYDDENT 201 250 ENSP00000356713/1-489 CYIRVYNVYV RMNGSEIQYK ILTQKEDDCD EIQCQLAIPV SSLNSQYCVS ENSBTAP00000016650/1-466 CYTFTYSVFV SVNRSETTDK MYT-KEEDCN ETQCFLNIPV SSLNSQYCVS ENSTTRP00000015393/1-463 CYTFTYNVFV RINGSETTNK MYIKKEDDCN ETQCFLSIPV SSLNSEYCVS bmy_14478T0/1-467 CYTFTYNVFV RINGSETTDK MYIKKEDDCN ETQCFLSIPV SSLNSEYCVS BACU014337/1-417 CYTFTYNVFV RINGSETTDK MYIKKEDDCN ETQCFLSIPV SSLNSEYCVS 251 300 ENSP00000356713/1-489 AEGVLHVWGV TTEKSKEVCI TIF-NSSIKG SLWIPVVAAL LLFLVLSLVF ENSBTAP00000016650/1-466 AEGVSELWAV TTEKSDELCI TFSDDNNTED PVWIPIVAAL LLFLVFALVV ENSTTRP00000015393/1-463 AEGVSETWAV TTEKSEELCI TVSDNNSTED PVWIPIVAAL LLFLVLALVV bmy_14478T0/1-467 AEGVSETWAV TTEKSEELCI TVSDNNSTGG -----VIEAF I--------- BACU014337/1-417 AEGVSEMWAV TTEKSEELCI TIFDNNSTGD PVWVPIVAAL LLFLVLALVA 301 350 ENSP00000356713/1-489 ICFYIKKINP LKEKSIILPK SLISVVRSAT LETKPESKYV SLITSYQPFS ENSBTAP00000016650/1-466 VCCIIKKFYP IKREGTKLPK SLLSVVKNAS SEAKFDSKII SPIT-YQPIA ENSTTRP00000015393/1-463 VCCLVKKMNP FKRENIMLPK SLLSVVKSAS SETKSESKYI SPIT-YQPIA bmy_14478T0/1-467 ---------- ---------- -WLSVVKSAS SETKSESKYI SPIT-YQPIA BACU014337/1-417 VCCLVKKMNP FKRENIMLPK SLLSVVKSAS SETKSESKYI SPIT-YQPIA 351 400 ENSP00000356713/1-489 LEKEVVCEEP LSPATVPGMH TEDNPGKVEH TEELSSITEV VTTEENIPDV ENSBTAP00000016650/1-466 VE-----NEQ LSPGTISSLH TEDNPGKVEH G-DLSSEMEV VTIEENISDL ENSTTRP00000015393/1-463 AG-----SEQ LSPGTISSVH TEDSPGKAEH GEDLSSETEV VMTEENISDL bmy_14478T0/1-467 IE-----NEQ LSPGTISSVH TEDNPGKAEH GEDLSSETEV VITEENISDL BACU014337/1-417 IE-----NEQ LSPGTISNVC TEDNPGKAEH GEDLSSETEV VITEENISDL 401 450 ENSP00000356713/1-489 VPGSHLTPIE RESSSPLSSN QSEPGSIALN SYHSRNCSES DHSRNGFDTD ENSBTAP00000016650/1-466 APCSPLTP-E REDSIHASSN QSESCSITLN AYHSRNGSDS -----GLAVS ENSTTRP00000015393/1-463 ASGSSLTPVK GENSMHASSN QSETCNITLN VYHSRNGSDG -----GLVVS bmy_14478T0/1-467 APGSSLTPVK GENSIHASSN QSETCSITLN AYHSRNGSDS -----GLVVS BACU014337/1-417 APGSSLTPVK GENSIHASSN QSETCSITLN TYHSRNGSDS -----GLVVS 451 500 ENSP00000356713/1-489 SSCLESHSSL SDSEFPPNNK GEIKTEGQEL ITVIKAPTSF GYDKPHVLVD ENSBTAP00000016650/1-466 DNC------- SSSEFPPSNK TEVKTEGQDF ITLRNTTTSF GYDKPHVLVD ENSTTRP00000015393/1-463 ENC------- SDSEFPPSNK TEIKTEGRES ITLRNTITSF GYDKPHVLVD bmy_14478T0/1-467 DNC------- SDSEFPPSNK SEIKTEGQES ITLRNTTTSF GYDKPHVLVD BACU014337/1-417 DNC------- PDSEFPPSNK TEIKTEGQES ITLRNTTTSF GYDKPHVLVD 501 550 ENSP00000356713/1-489 LLVDDSGKES LIGYRPTEDS KEFS ENSBTAP00000016650/1-466 LLVDEGGKES LIGYRLTADS REFS ENSTTRP00000015393/1-463 LLVDEGGKES LIGYRPTADS REFS bmy_14478T0/1-467 LLVDEGGKES LIGYRPTADS KEFS BACU014337/1-417 LLIDEGGKES LIGYRPTADS KEFS