KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:28 2014 Check: 00 .. Name: ENSP00000374125/1-328 Len: 329 Check: 9026 Weight: 1.00 Name: ENSBTAP00000016659/1-329 Len: 329 Check: 1502 Weight: 1.00 Name: ENSTTRP00000005085/1-329 Len: 329 Check: 2007 Weight: 1.00 Name: BACU017637/1-196 Len: 329 Check: 1588 Weight: 1.00 Name: bmy_21136T0/1-284 Len: 329 Check: 4098 Weight: 1.00 // 1 50 ENSP00000374125/1-328 MEKSIWLLAC LAWVLPTGSF VRTKIDTTEN LLNTEVHSSP AQRWSMQVPP ENSBTAP00000016659/1-329 MEGSFRLLAC LVCIVPMGSL VRTKRDTTGN LLNTEMNSAP AQRWSMQVPA ENSTTRP00000005085/1-329 MEGSFQLLAS LMCIILMGSF VRTKRDTTRN LLNTELHSAP AQRWSMKLPA BACU017637/1-196 ---------- ----LPLGSF VRTKSDTTRN LLNTELHSAP AQRWSMKVPA bmy_21136T0/1-284 ---------- ---------- ---------- ---------- -----MKVPA 51 100 ENSP00000374125/1-328 EVSAEAGDAA VLPCTFTHPH RHYDGPLTAI WRAGEPYAGP QVFRCAAARG ENSBTAP00000016659/1-329 EVSATAGEAA VLPCTFTHPH RHYDGPLTAI WRAGEPFAGP QVFRCAAARG ENSTTRP00000005085/1-329 EVSAAAGEAA VLPCTFTHPH RHYDGPLTAI WRAGEPYTGP QVFRCAAARS BACU017637/1-196 EVSAAAGEAA VLPCTFTHPH RHYDGPLTAI WRAGEPYTGP QVFR------ bmy_21136T0/1-284 EVSAAAGEAA VLPCTFTHPH RHYDGPLTAI WRAGEPYTGP QVFRCAAARS 101 150 ENSP00000374125/1-328 SELCQTALSL HGRFRLLGNP RRNDLSLRVE RLALADDRRY FCRVEFAGDV ENSBTAP00000016659/1-329 SELCQTALSL HGRFRLLGNP RRNDLSLRIE RLALADDGRY FCRVEFAGDV ENSTTRP00000005085/1-329 SELCQTALSL HGRFRLLGNP RRNDLSLRVE RLALADDGRY FCRVEFAGDV BACU017637/1-196 ---------- ---------- ---------- ---------- ---------- bmy_21136T0/1-284 SELCQTALSL HGRFRLLGNP RRNDLSLRVE RLALADDGRY FCRVEFAGDV 151 200 ENSP00000374125/1-328 HDRYESRHGV RLHVTAAPRI VNISVLPSPA HAFRALCTAE GEPPPALAWS ENSBTAP00000016659/1-329 HDRYESRQGV RLRVTAAPRI VNISVLPGPG HAFHALCTAE GEPPPALAWS ENSTTRP00000005085/1-329 HERYESRHGV RLRVTAAPRI VNISVLPGPA HTFHALCTAE GEPPPTLTWS BACU017637/1-196 ---------- ---------- ---------- ---------- ---------- bmy_21136T0/1-284 HDRYESRHGV RLRVTAAPRI VNISVLPGPA HTFHALCTAE GEPPPALAWS 201 250 ENSP00000374125/1-328 GPALGNSLAA VRSPREGHGH LVTAELPALT HDGRYTCTAA NSLGRSEASV ENSBTAP00000016659/1-329 GPALGNGSAA TRSPGHDHGH QVTAELPALA HDGRYTCTAS NSLGRAEASV ENSTTRP00000005085/1-329 GPALGNGSAS VPSPGQDHGH QVTAELPALA HDGRYTCAAS NSLGRTEASV BACU017637/1-196 ---------- ---PGQDHGH QVTAELPALA QDGRYTCAAS NSLGRAEASV bmy_21136T0/1-284 GPALGNGSAA VPSPGQDHGH QVTAELPALA HDGRYTCAAS NSLGRAEASV 251 300 ENSP00000374125/1-328 YLFRFHGASG ASTVALLLGA LGFKALLLLG VLAARA-ARR RPEHLDTPDT ENSBTAP00000016659/1-329 YLFRFHGASM ASATALLLGA LGLKALLLLG VLGVWATAQH RLEHPVTPDA ENSTTRP00000005085/1-329 YLFRFHGASR ASAIALPLGA LGLKVLLLLG VLAARAAACR RLEYPVTQDA BACU017637/1-196 YLFRFHGASG ASAIALPLGA LGLKVLLLLG VLAAGAAARR RLEYPVTQDA bmy_21136T0/1-284 YLFRFHGASG ASAIALPLGA LGLKVLLLLG VLAARAAARR RLEYPVTQDA 301 350 ENSP00000374125/1-328 PPRSQAQESN YENLSQMNPR SPPATMCSP ENSBTAP00000016659/1-329 PPRPQAQESN YENLNQMSPR GPPAAVCSP ENSTTRP00000005085/1-329 SPRPQAQESN YENLGQMSPQ GPPAAMCSP BACU017637/1-196 SPRPQAQESN YENLSQVSPQ GPPAAVCSP bmy_21136T0/1-284 SPRPQAQESN YENLSQMSPQ GPPAAVCSP