KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:29 2014 Check: 00 .. Name: ENSTTRP00000012507/1-887 Len: 898 Check: 5747 Weight: 1.00 Name: ENSP00000376317/1-898 Len: 898 Check: 9748 Weight: 1.00 Name: ENSBTAP00000016661/1-898 Len: 898 Check: 261 Weight: 1.00 Name: bmy_09856T0/1-655 Len: 898 Check: 180 Weight: 1.00 Name: BACU013596/1-884 Len: 898 Check: 292 Weight: 1.00 // 1 50 ENSTTRP00000012507/1-887 MRKGVPRDPE IADLFYKDDP EELFIGLHEI GHGSFGAVYF ATNAHTNEVV ENSP00000376317/1-898 MRKGVLKDPE IADLFYKDDP EELFIGLHEI GHGSFGAVYF ATNAHTSEVV ENSBTAP00000016661/1-898 MRKGVPRDPE IADLFYKDDP EELFIGLHEI GHGSFGAVYF ATNAHTNEVV bmy_09856T0/1-655 ---------- ---------- ---------- ---------- ---------- BACU013596/1-884 MRKGVPRDPE IADLFYKDDP EELFIGLHEI GHGSFGAVYF ATNAHTSEVV 51 100 ENSTTRP00000012507/1-887 AVKKMSYSGK QAHEKWQDIL KEVKFLRQLK HPNTIEYKGC YLKEHTAWLV ENSP00000376317/1-898 AIKKMSYSGK QTHEKWQDIL KEVKFLRQLK HPNTIEYKGC YLKEHTAWLV ENSBTAP00000016661/1-898 AIKKMSYSGK QAHEKWQDIL KEVKFLQQLR HPNTIEYKGC YLKEHTAWLV bmy_09856T0/1-655 ---------- ---------- ---------- ---------- ---------- BACU013596/1-884 AVKKMSYSGK QAHEKWQDIL KEVKFLQQLK HPNTIEYKGC YLKEHTAWV- 101 150 ENSTTRP00000012507/1-887 MEYCLGSASD LLEVHKKPLQ EVEIAAITHG ALQGLAYLHS HALIHRDIKA ENSP00000376317/1-898 MEYCLGSASD LLEVHKKPLQ EVEIAAITHG ALHGLAYLHS HALIHRDIKA ENSBTAP00000016661/1-898 MEYCLGSASD LLEVHKKPLQ EMEIAAITHG ALQGLAYLHS HALIHRDIKA bmy_09856T0/1-655 ---------- ---------- ---------- ---------- ---------- BACU013596/1-884 ---------- ---IHKKPLQ EVEIAAITHG ALQGLAYLHS HALIHRDIKA 151 200 ENSTTRP00000012507/1-887 GNILLTEPGQ VKLADFGSAS MASPANSFVG TPYWMAPEVI LAMDEGQYDG ENSP00000376317/1-898 GNILLTEPGQ VKLADFGSAS MASPANSFVG TPYWMAPEVI LAMDEGQYDG ENSBTAP00000016661/1-898 GNILLTEPGQ VKLADFGSAS MASPANSFVG TPYWMAPEVI LAMDEGQYDG bmy_09856T0/1-655 ---------- ---------- ---------- ---------- ---------- BACU013596/1-884 GNILLTEPGQ VKLADFGSAS MASPANSFVG TPYWMAPEVI LAMDEGQYDG 201 250 ENSTTRP00000012507/1-887 KVDIWSLGIT CIEMAERKPP LFNMNAMSAL YHIAQNDSPT LQSKEWTDSF ENSP00000376317/1-898 KVDIWSLGIT CIELAERKPP LFNMNAMSAL YHIAQNDSPT LQSNEWTDSF ENSBTAP00000016661/1-898 KVDIWSLGIT CIEMAERKPP LFNMNAMSAL YHIAQNDSPT LQSNEWTDSF bmy_09856T0/1-655 ---------- ---------- ---MNAMSAL YHIAQNDSPT LQSKEWTDSF BACU013596/1-884 KVDIWSLGIT CIEMAERKPP LFNMNAMSAL YHIAQNDSPT LQSKEWTDSF 251 300 ENSTTRP00000012507/1-887 RRFVDYCLQK MPQERPTSVE LLRHDFVRRD RPLRVLIDLI QRTKDAVREL ENSP00000376317/1-898 RRFVDYCLQK IPQERPTSAE LLRHDFVRRD RPLRVLIDLI QRTKDAVREL ENSBTAP00000016661/1-898 RRFVDYCLQK MPQERPTSAE LLRHDFVRRD RPLRVLIDLI QRTKDAVREL bmy_09856T0/1-655 RRFVDYCLQK MPQERPTSVE LLRHDFVRRD RPLRVLIDLI QRTKDAVREL BACU013596/1-884 RRFVDYCLQK MPQERPTSVE LLRHDFVRRD RPLRVLIDLI QRTKDAVREL 301 350 ENSTTRP00000012507/1-887 DNLQYRKMKK ILFQETRNGP LNESQEDEED SEHGTSLSRE LDSLGSNHSI ENSP00000376317/1-898 DNLQYRKMKK ILFQETRNGP LNESQEDEED SEHGTSLNRE MDSLGSNHSI ENSBTAP00000016661/1-898 DNLQYRKMKK ILFQETRNGP LNESQEDEED SEHGTSLSRE LDSLGSNHSI bmy_09856T0/1-655 DNLQYRKMKK ILFQETRNGP LNESQEDEED SEHGTSLSRE LDSLGSNHSI BACU013596/1-884 DNLQYRKMKK ILFQETRNGP LNESQEDEED SEHGTSLSRE LDSLGSNHSI 351 400 ENSTTRP00000012507/1-887 PSMSVSTGSQ SSSVNSMQEV MDDSSSELVM MHDDESPVNS SSSVVHRKDH ENSP00000376317/1-898 PSMSVSTGSQ SSSVNSMQEV MDESSSELVM MHDDESTINS SSSVVHKKDH ENSBTAP00000016661/1-898 PSMSVSTGSQ GSSVNSMQEV MDDSSSELVM MHDDESPVNS TPSVVHKKDH bmy_09856T0/1-655 PSVSVSTGSQ SSSVNSMQEV MDDSSSELVM MHDDESPVNS SSSVVHKKDH BACU013596/1-884 PSMSVSTGSQ SSSVNSMQEV MDDSSSELVM MHDDESPVNS SSSVVPKKDH 401 450 ENSTTRP00000012507/1-887 VFIRDEAGHG DPRPEPRPTS --QSQALHYR NRER-VTIKS ASLVTRQIHE ENSP00000376317/1-898 VFIRDEAGHG DPRPEPRPTQ SVQSQALHYR NRERFATIKS ASLVTRQIHE ENSBTAP00000016661/1-898 VFIRDEAGHG DPRPEPRPTQ SVQSQALHYR NRERFATIKS ASLVTRQIHE bmy_09856T0/1-655 VFIRDEAGHG DPRPEPRPTQ SVQSQALHYR NRERFATIKS ASLVTRQIHE BACU013596/1-884 VFIRDEAGHG DPRPEPRPTQ SVQSQALHYR NRERFATIKS ASLVTRQIHE 451 500 ENSTTRP00000012507/1-887 HEQENELREQ MSGYKRMRRQ HQKQLIALEN KLKAEMDEHR LKLQKEVETH ENSP00000376317/1-898 HEQENELREQ MSGYKRMRRQ HQKQLIALEN KLKAEMDEHR LKLQKEVETH ENSBTAP00000016661/1-898 HEQENELREQ MSGYKRMRRQ HQKQLIALEN KLKAEMDEHR LKLQKEVETH bmy_09856T0/1-655 HEQENELREQ MSGYKRMRRQ HQKQLIALEN KLKAEMDEHR LKLQKEVETH BACU013596/1-884 HEQENELREQ MSGYKRMRRQ HQKQLIALEN KLKAEMDEHR LKLQKEVETH 501 550 ENSTTRP00000012507/1-887 ANNSSIELEK LAKKQVAIIE KEAKVAAADE KKFQQQILAQ QKKDLTTFLE ENSP00000376317/1-898 ANNSSIELEK LAKKQVAIIE KEAKVAAADE KKFQQQILAQ QKKDLTTFLE ENSBTAP00000016661/1-898 ANNSSIELEK LAKKQVAIIE KEAKVAAADE KKFQQQILAQ QKKDLTTFLE bmy_09856T0/1-655 ANNSSIELEK LAKKQVATIE KEAKVAAADE KKFQQQILAQ QKKDLTTFLE BACU013596/1-884 ANNSSIELEK LAKKQVATIE KEAKVAAADE KKFQQQILAQ QKKDLTTFLE 551 600 ENSTTRP00000012507/1-887 SQKKQYKICK EKIKEEMNED HSTPKKEKQE RISKHKENLQ HTQAEEEAHL ENSP00000376317/1-898 SQKKQYKICK EKIKEEMNED HSTPKKEKQE RISKHKENLQ HTQAEEEAHL ENSBTAP00000016661/1-898 SQKKQYKICK EKIKEEMNED HSTPKKEKQE RISKHKENLQ HTQAEEEAHL bmy_09856T0/1-655 SQKKQYKICK EKIKEEMNED HSTPKKEKQE RISKHKENLQ HTQAEEEAHL BACU013596/1-884 SQKKQYKICK EKIKEEMNED HSTPKKEKQE RISKHKENLQ HTQAEEEAHL 601 650 ENSTTRP00000012507/1-887 LTQQRLYYDK NCRFFKRKIM IKRHEVEQQN IREELNKKRT QKEMEHAMLI ENSP00000376317/1-898 LTQQRLYYDK NCRFFKRKIM IKRHEVEQQN IREELNKKRT QKEMEHAMLI ENSBTAP00000016661/1-898 LTQQRLYYDK NCRFFKRKIM IKRHEVEQQN IREELNKKRT QKEMEHAMLI bmy_09856T0/1-655 LTQQRLYYDK NCRFFKRKIM IKRH------ --EELNKKRT QKEMEHAMLI BACU013596/1-884 LTQQRLYYDK NCRFFKRKIM IKRHEVEQQN IREELNKKRT QKEMEHAMLI 651 700 ENSTTRP00000012507/1-887 RHDESTRELE YRQLHTLQKL RMDLIRLQHQ TELENQLEYN KRRERELHRK ENSP00000376317/1-898 RHDESTRELE YRQLHTLQKL RMDLIRLQHQ TELENQLEYN KRRERELHRK ENSBTAP00000016661/1-898 RHDESTRELE YRQLHTLQKL RMDLIRLQHQ TELENQLEYN KRRERELHRK bmy_09856T0/1-655 RHDESTRELE YRQLHTLQKL RMDLIRLQHQ TELENQLEYN KRRERELHRK BACU013596/1-884 RHDESTRELE YRQLHTLQKL RMDLIRLQHQ TELENQLEYN KRRERELHRK 701 750 ENSTTRP00000012507/1-887 HVMELRQQPK NLKAMEMQIK KQFQDTCKVQ TKQYKALKNH QLEVTPKNEH ENSP00000376317/1-898 HVMELRQQPK NLKAMEMQIK KQFQDTCKVQ TKQYKALKNH QLEVTPKNEH ENSBTAP00000016661/1-898 HVMELRQQPK NLKAMEMQIK KQFQDTCKVQ TKQYKALKNH QLEVTPKNEH bmy_09856T0/1-655 H--------- ---AMEMQIK KQFQDTCKVQ TKQYKALKNH QLEVTPKNEH BACU013596/1-884 HVMELRQQPK NLKAMEMQIK KQFQDTCKVQ TKQYKALKNH QLEVTPKNEH 751 800 ENSTTRP00000012507/1-887 KTILKTLKDE QTRKLAILAE QYEQSINEMM ASQALRLDEA QEAECQALRL ENSP00000376317/1-898 KTILKTLKDE QTRKLAILAE QYEQSINEMM ASQALRLDEA QEAECQALRL ENSBTAP00000016661/1-898 KTILKTLKDE QTRKLAILAE QYEQSINEMM ASQALRLDEA QEAECQALRL bmy_09856T0/1-655 KTILKTLKDE QTRKLAILAE QYEQSINEMM ASQALRLDEA QEAECQALRL BACU013596/1-884 KTILKTLKDE QTRKLAILAE QYEQSINEMM ASQALRLDEA QEAECQALRL 801 850 ENSTTRP00000012507/1-887 QLQQEMELLN AYQSKIKMQT EAQHERELQK LEQRVSLRRA HLEQKIEEEL ENSP00000376317/1-898 QLQQEMELLN AYQSKIKMQT EAQHERELQK LEQRVSLRRA HLEQKIEEEL ENSBTAP00000016661/1-898 QLQQEMELLN AYQSKIKMQT EAQHERELQK LEQRVSLRRA HLEQKIEEEL bmy_09856T0/1-655 QLQQEMELLN AYQSKIKMQT EAQHERELQK LEQRVSLRRA HLEQKIEEEL BACU013596/1-884 QLQQEMELLN AYQSKIKMQT EAQHERELQK LEQRVSLRRA HLEQKIEEEL 851 900 ENSTTRP00000012507/1-887 AALQV-RSER -KYLLQERE- --EPFDMESF RMGFGNLVT- --DKEDYR ENSP00000376317/1-898 AALQKERSER IKNLLERQER EIETFDMESL RMGFGNLVTL DFPKEDYR ENSBTAP00000016661/1-898 AALQKERSER IKYLLERQER EIETFDMESL RMGFGNLVTL DFPKEDYR bmy_09856T0/1-655 AALQKERSER IKYLLERQER EIETFDMESL RMGFGNLVTL DFPKEDYR BACU013596/1-884 AALQKERSER IKYLLERQER EIETFDMESL RMGFGNLVTL DFPKEDYR