KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:35 2014 Check: 00 .. Name: ENSP00000418803/1-285 Len: 291 Check: 30 Weight: 1.00 Name: ENSBTAP00000016702/1-285 Len: 291 Check: 697 Weight: 1.00 Name: ENSTTRP00000013633/1-285 Len: 291 Check: 7265 Weight: 1.00 Name: bmy_11741T0/1-150 Len: 291 Check: 2409 Weight: 1.00 Name: BACU009303/1-291 Len: 291 Check: 583 Weight: 1.00 // 1 50 ENSP00000418803/1-285 MEVPPPAPRS FLCRALCLFP RVFAAEAVTA DSEVLEERQK RLPYVPEPYY ENSBTAP00000016702/1-285 MEARPPAPRS FLCRSLRPFP RVFAAAAVAA DPKALVEDQE LSSFVSEPQY ENSTTRP00000013633/1-285 MEVPPPAPRS FLCRALSPFP RVFAAEAVAA DPKALVKDQK LPSYVPEPQN bmy_11741T0/1-150 MEVRPPAPRS FLCRALSPFP RVFAAEAVAT DPKALVEDQK LPFYVPEPQY BACU009303/1-291 MEVRPPAPRS FLCRALSPFP RVFAAEAVAA DPKALVEDQK LPSYVPEPQY 51 100 ENSP00000418803/1-285 PESGWDRLRE LFGKDEQQRI SKDLANICKT AATAGIIGWV YGGIPAFIHA ENSBTAP00000016702/1-285 PESGWDRLRE LFVKDERQRT SKELQDIYKA AISAGIIGWA YGGIPAFIHA ENSTTRP00000013633/1-285 PESGWDRLRE LFVKDEQQRT SKELQDIYKA AISAGVIGWA YGGIPAFIHA bmy_11741T0/1-150 PESGWDRLRE LFVKDEQQRT SKELQDIYKA AISAGIIGWA YGGIPAFIHA BACU009303/1-291 PESGWDRLRE LFVKDEQQRT SKELQDIYKA AISAGIIGWA YGGIPAFIHA 101 150 ENSP00000418803/1-285 KQQYIEQSQA EIYHNRFDAV QSAHRAATRG FIRYGWRWGW RTAVFVTIFN ENSBTAP00000016702/1-285 KQRYIEQSQA EVYHNQLDAV QSAHRAATRG FIRYGWRWSW RTAMFVTIFK ENSTTRP00000013633/1-285 KQHYIEQSQA EIYHNQLDAV QSAHRAATRG FIRYGWRWSW RTAMFVTIFN bmy_11741T0/1-150 KQHYIEQSQA EIYHNQLDAV QSAHRAATRG FIRYGWRWSW RTAMFVTIFK BACU009303/1-291 KQHYIEQSQA EIYHSQLDAV QSAHRAATRG FIRYGWRWSW RTAMFVTIFN 151 200 ENSP00000418803/1-285 TVNTSLNVYR NKDALSHFVI AGAVTGSLFR INVGLRGLVA GGIIGALLGT ENSBTAP00000016702/1-285 TVTYGRNTYK RKNNITQLTI KIAVTGSLFR INLGLHGLVA GGIIGALLGT ENSTTRP00000013633/1-285 TVNTGLNVYR NKNALSHFVI AGAITGSLFR INLGLHGLVA GGIIGALLGT bmy_11741T0/1-150 ---------- ---------- ---------- ---------- ---------- BACU009303/1-291 TVNTGLNVYR NKNALSHFVI AGAITGSLFR INLGLRGLVA GGIIGALLGT 201 250 ENSP00000418803/1-285 PVGGLLMAFQ KYSGETVQER KQKDRKALHE LKLEEW--KG RLQVTEHLPE ENSBTAP00000016702/1-285 PIGSLLMALQ MYCGETVQER KQKDRKAFQE LKLEER--KA RLQFTELLPE ENSTTRP00000013633/1-285 PIGSLLMALQ KYCGETVQER KQKDRKALQE LKLGER--KA RLHFTELLPE bmy_11741T0/1-150 ---------- ---------- ---------- ---------- ---------- BACU009303/1-291 PIGSLLMALQ KYCGETVEER KQKDRKALQE LKMEERSMKT RLHFTELLPE 251 300 ENSP00000418803/1-285 KIESSLQEDE PENDAKKIEA LLNLPRNPSV IDKQDK---- D ENSBTAP00000016702/1-285 EIESNLQKDQ SKDDAQKIEA LLNLPRNPSS TDKQDK---- D ENSTTRP00000013633/1-285 EIESNLQKNR SKADAKKIEA LLNLPRNPSS ADKQDK---- D bmy_11741T0/1-150 ---------- ---------- ---------- ---------- - BACU009303/1-291 EIESNLQKNR SKDDAKKIEA LLNLPRNPSS ADQVSEIDLI D