KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:38 2014 Check: 00 .. Name: ENSP00000395249/1-543 Len: 561 Check: 1483 Weight: 1.00 Name: ENSBTAP00000016754/1-541 Len: 561 Check: 5786 Weight: 1.00 Name: bmy_13373T0/1-553 Len: 561 Check: 5903 Weight: 1.00 Name: ENSTTRP00000009509/1-544 Len: 561 Check: 738 Weight: 1.00 // 1 50 ENSP00000395249/1-543 MASGGGG--- -GNTGAGGGP GMGLSLGLGL GLSLGMSEAT SEAEEEAATA ENSBTAP00000016754/1-541 MASGGVG--- -GNTGTGGGP GLGLT--LGL G--LGMGEAT GEAEEEAATA bmy_13373T0/1-553 MASGGGG--G AGNTGAGGGS GLGLS--LGL GLSLGMGEAT GEAEEEAATA ENSTTRP00000009509/1-544 MASGGGGGGG AGNTGAGGGS GLGLS--LGL GLSLCMGEAT GEAEEEAATA 51 100 ENSP00000395249/1-543 EAVGRLATTL WLRLRGWEAV LAAAQRLLVW EKPLHSLVTA AALNGLFWLL ENSBTAP00000016754/1-541 EAVGRLATTL WLRLRGWEAV LAAAQRLLVW EKPLHSLVTA AALNGLFWLL bmy_13373T0/1-553 EAVGRLATAL WLRLRGWEAV LAAAQRLLVW EKPLHSLVTA AALNGLFWLL ENSTTRP00000009509/1-544 EAVGRLATAL WLRLRGWEAM LAAAQRLLVW EKPLHNLVTA AALNGLFWLL 101 150 ENSP00000395249/1-543 SSSSLRPFFL LSVSLLAYFL LDLWQPRFLP DVSAS----- ----SPEEPH ENSBTAP00000016754/1-541 SSSSLRPFFL LSISLLAYFL LDLWQPRFLP DISAS----- ----SPEEPH bmy_13373T0/1-553 SSSSLRPFFL LSISLLAYFL LDLWQPRFLP DIPEGFECLG SWCLRPPGVV ENSTTRP00000009509/1-544 SSSSLRPFFL LSISLLAYFL LDLWQPRFLP DISAS----- ----SPEEPH 151 200 ENSP00000395249/1-543 S--DSEGAGS GARPHLLSVP ELCRYLAESW LTFQIHLQEL LQYKRQNPAQ ENSBTAP00000016754/1-541 S--DSEGAGS GARPHLLSVP ELCRYLAESW LTFQIHLQEL LQYKRQNPAQ bmy_13373T0/1-553 SCLPSEGAGS GARPHLLSVP ELCRYLAESW LTFQIHLQEL LQYKRQNPAQ ENSTTRP00000009509/1-544 S--DSEGAGS GARPHLLSVP ELCRYLAESW LTFQIHLQEL LQYKRQNPAQ 201 250 ENSP00000395249/1-543 FCVRVCSGCA VLAVLGHYVP GIMISYIVLL SILLWPLVVY HELIQRMYTR ENSBTAP00000016754/1-541 FCARVCSGCA VLAVLGHYVP GIMISYIVLL SILLWPLVVY HELIQRMYTR bmy_13373T0/1-553 FCARVCSGCA VLAVLGHYVP GIMISYIVLL SILLWPLVVY HELIQRMYTR ENSTTRP00000009509/1-544 FCARVCSGCA VLAVLGHYVP GIMISYIVLL SILLWPLVVY HELIQRMYTR 251 300 ENSP00000395249/1-543 LEPLLMQLDY SMKAEANALH HKHDKRKRQG KNAPPGGDEP LAETESESEA ENSBTAP00000016754/1-541 LEPLLMQLDY SMKAEADALH HKHDKRKRQG KNAPPGGDEP LAETESESEA bmy_13373T0/1-553 LEPLLMQLDY SMKAEADALH HKHDKRKRQG KNAPPGGDEP LAETESESEA ENSTTRP00000009509/1-544 LEPLLMQLDY SMKAEADALH HKHDKRKRQG KNAPPGGDEP LAETESESEA 301 350 ENSP00000395249/1-543 ELAGFSPVVD VKKTALALAI TDSELSDEEA SILESGGFSV SRATTPQLTD ENSBTAP00000016754/1-541 ELAGFSPVVD VKKTALALAI TDSELSDEEA SILESGGFSV SRATTPQLTD bmy_13373T0/1-553 ELAGFSPVVD VKKTALALAI TDSELSDEEA SILESGGFSV SRATTPQLTD ENSTTRP00000009509/1-544 ELAGFSPVVD VKKTALALAI TDSELSDEEA SILESGGFSV SRATTPQLTD 351 400 ENSP00000395249/1-543 VSEDLDQQSL PSEPEETLSR DLGEGEEGEL APPEDLLGRP QALSRQALDS ENSBTAP00000016754/1-541 VSEDLDQQSL PSEPEEALSR ELGEGEETDL APPEDLLGPP QALSRQDLDL bmy_13373T0/1-553 VSEDLDQQSL PSEPEEALTR ELGEGEETDL APPEDLLGSP QALSRQDLDL ENSTTRP00000009509/1-544 VSEDLDQQSL PSEPEEALSR ELGEGEETDL APPEDLLGSP QALSRQDLDL 401 450 ENSP00000395249/1-543 EEEEEDVAAK ETLLRLSSPL HFVNTHFNGA GSPPDGVKCS PGGPVETLSP ENSBTAP00000016754/1-541 -EEEEDAASK EALLQLSSPL HFVNTHFNGA GSPTDGVMLS PGGPVETLSP bmy_13373T0/1-553 -EEEADVASE ETLLRLSSPL HFVNTHFNGA GSPTDGVMLS PGGPVETLSP ENSTTRP00000009509/1-544 -EEEEDVASK ETLLRLSSPL HFVNTHFNGA GSPTDGVMLS PGGPVETPSP 451 500 ENSP00000395249/1-543 ETVSGGLTAL PGTLSPPLCL VGSDPAPSPS ILPPVPQDSP QPLPAPEEEE ENSBTAP00000016754/1-541 EAVSGDLTTP PSTLLPLLGL AESDPVPSPS VLPSLPQDSP QPLPAPEEEE bmy_13373T0/1-553 EAVSGDLITP PSALSPLLCL AENDPVPSPS VLPPLPQDSP QPLPAPEEEE ENSTTRP00000009509/1-544 EAVSGDLITP PSALSPLLCL AENDPAPTPS VLPPLPQDSP QPLPAPEEEE 501 550 ENSP00000395249/1-543 ALTTEDFELL DQGELEQLNA ELGLEPETPP KPPDA---PP LGPDIHSLVQ ENSBTAP00000016754/1-541 ALTTEDFELL DQGELEQLNA ELGLGPETCP EPPDAPPPPP LGPDTPSLVQ bmy_13373T0/1-553 ALTTEDFELL DQGELEQLNA ELGLGPETFP EPADA---PP LGPNTPSLVQ ENSTTRP00000009509/1-544 ALTTEDFELL DQGELEQLNA ELGLGPETFP EPADA---PP LGPNTPSLVQ 551 600 ENSP00000395249/1-543 SDQEAQAVAE P ENSBTAP00000016754/1-541 SDQEAQAMAE P bmy_13373T0/1-553 SAQEAQATAE P ENSTTRP00000009509/1-544 SAQEAQAMAE P