KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:38 2014 Check: 00 .. Name: ENSBTAP00000016755/1-417 Len: 420 Check: 1104 Weight: 1.00 Name: ENSP00000335397/1-420 Len: 420 Check: 9616 Weight: 1.00 Name: bmy_17539T0/1-401 Len: 420 Check: 2549 Weight: 1.00 Name: ENSTTRP00000001957/1-420 Len: 420 Check: 306 Weight: 1.00 // 1 50 ENSBTAP00000016755/1-417 --PPSAYLLA GP-PACVLLL LLAAAPAAAR CPMLCTCYPA PPTVSCQANN ENSP00000335397/1-420 MLPGLRRLLQ APASACLLLM LLALPLAAPS CPMLCTCYSS PPTVSCQANN bmy_17539T0/1-401 ---------- ---------M LLALPPAAPS CPMLCTCYSS PPTVSCQANN ENSTTRP00000001957/1-420 MLPGLRSLLQ GPAPACLLLM LLALPPAAPS CPMLCTCYSS PPTVSCQANN 51 100 ENSBTAP00000016755/1-417 FSAVPRALPP GTQRLFLQNN LIGALRPGSF GPSLLTLWLF SNNLSAIYPG ENSP00000335397/1-420 FSSVPLSLPP STQRLFLQNN LIRTLRPGTF GSNLLTLWLF SNNLSTIYPG bmy_17539T0/1-401 FSSVPLSLPP STQRLFLQNN LIRTLRPGTF GPHLLTLWLF SNNLSAIYPG ENSTTRP00000001957/1-420 FSSVPLSLPP STQRLFLQNN LIRTLRPGTF GPNLLTLWLF SNNLSAIYPG 101 150 ENSBTAP00000016755/1-417 TFRHLQALEE LDLGDNRHLR SLEPDTFQGL ERLQSLHLYR CQLSSLPGTI ENSP00000335397/1-420 TFRHLQALEE LDLGDNRHLR SLEPDTFQGL ERLQSLHLYR CQLSSLPGNI bmy_17539T0/1-401 TFRHLQALEE LDLGDNRHLR SLEPDTFQGL ERLQSLHLYR CQLSSLPGNI ENSTTRP00000001957/1-420 TFRHLQALEE LDLGDNRHLR SLEPDTFQGL ERLQSLHLYR CQLSSLPGNI 151 200 ENSBTAP00000016755/1-417 FRGLVSLQYL YLQENSLVHL QDDLFADLAN LSHLFLHGNR LRLLTEHVFR ENSP00000335397/1-420 FRGLVSLQYL YLQENSLLHL QDDLFADLAN LSHLFLHGNR LRLLTEHVFR bmy_17539T0/1-401 FRGLVSLQYL YLQENSLLHL QDDLFADLAN LSHLFLHGNR LRLLTEHVFR ENSTTRP00000001957/1-420 FRGLVSLQYL YLQENSLLHL QDDLFADLAN LSHLFLHGNR LRLLTEHVFR 201 250 ENSBTAP00000016755/1-417 GLGSLDRLLL HGNRLQGVHR AAFRGLGRLT ILYLFNNSLA SLPGEALADL ENSP00000335397/1-420 GLGSLDRLLL HGNRLQGVHR AAFRGLSRLT ILYLFNNSLA SLPGEALADL bmy_17539T0/1-401 GLGSLDRLLL HGNRLQGVHR AAFRGLSRLT ILYLFNNSLA SLPGEALADL ENSTTRP00000001957/1-420 GLGSLDRLLL HGNRLQGVHR AAFRGLSRLT ILYLFNNSLA SLPGEALADL 251 300 ENSBTAP00000016755/1-417 PSLEFLRLNA NPWACDCRAR PLWAWFQRAR VSSSDVTCAS PPERRGRDLR ENSP00000335397/1-420 PSLEFLRLNA NPWACDCRAR PLWAWFQRAR VSSSDVTCAT PPERQGRDLR bmy_17539T0/1-401 PALEFLRLNA NPWACDCRAR PLWAWFQRAR VSSSDVTCAT PPERQGRDLR ENSTTRP00000001957/1-420 PALEFLRLNA NPWACDCRAR PLWAWFQRAR VSSSDVTCAT PPERQGRDLR 301 350 ENSBTAP00000016755/1-417 ALREADFQAC PPAAPTRPGG RARANSSSNH LYGVAEAGAP PADPSTLYRD ENSP00000335397/1-420 ALREADFQAC PPAAPTRPGS RARGNSSSNH LYGVAEAGAP PADPSTLYRD bmy_17539T0/1-401 ALREADFQAC PPAVPTRPGS RARGNSSSNH LYGVAEAGAP PADPSTLYRD ENSTTRP00000001957/1-420 SLREADFQAC PPAVPTRPGS RARGNSSSNH LYGVAEAGAP PADPSTLYRD 351 400 ENSBTAP00000016755/1-417 LPAEDARGSP GGDAPTEEDY WGGYGSEDRR GEQTCPGAAC QAPPDSRAPA ENSP00000335397/1-420 LPAEDSRGRQ GGDAPTEDDY WGGYGGEDQR GEQMCPGAAC QAPPDSRGPA bmy_17539T0/1-401 LPAEDPRGRQ GGDAPTEDDY WGGYGGEDQR GEQTCPGAAC QATPDSRGPA ENSTTRP00000001957/1-420 LPAEDPRGRQ GGDAPTEDDY WESYGGEDQR GEQTCPGAAC QATPDSRGPA 401 450 ENSBTAP00000016755/1-417 RAPGLAAPLL CLLILAPHHL ENSP00000335397/1-420 LSAGLPSPLL CLLLLVPHHL bmy_17539T0/1-401 LSAGLPTPLL CLLLLVPHHL ENSTTRP00000001957/1-420 LSAGLPTPLL CVLLLVPHHL