KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:39 2014 Check: 00 .. Name: ENSP00000384197/1-1036 Len: 1213 Check: 9814 Weight: 1.00 Name: ENSBTAP00000016758/1-638 Len: 1213 Check: 5530 Weight: 1.00 Name: ENSTTRP00000007046/1-1035 Len: 1213 Check: 7540 Weight: 1.00 Name: bmy_21618T0/1-637 Len: 1213 Check: 5681 Weight: 1.00 Name: BACU002217/1-692 Len: 1213 Check: 6598 Weight: 1.00 // 1 50 ENSP00000384197/1-1036 MGFALERFAE AVDPALECKL CGQVLEEPLC TPCGHVFCAS CLLPWAVRRR ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 MGFALERFAE AVDPDFQCRL CGQVLEEPLC TPCGHVFCAR CLLP-AARWR bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000384197/1-1036 RCPLQCQPLA PGELYRVLPL RSLIQKLRVQ CDYRARGCGH SVRLHELEAH ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 RCPVCCLPLA PGELKRVLPL ---------- ---------- ---------- bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000384197/1-1036 VEHCDFGPAR RLRSRGGCAS GLGGGEVPAR GGCGPTPRAG RGGGARGGPP ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 ---------- ---------- ---------- ---------- ---------- bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000384197/1-1036 GGRWGRGRGP GPRVLAWRRR EKALLAQLWA LQGEVQLTAR RYQEKFTQYM ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 ---------- ---------- ---------- ---------- ---------- bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000384197/1-1036 AHVRNFVGDL GGGHRRDGEH KPFTIVLERE NDTLGFNIIG GRPNQ----- ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 ---------- ---------- ---------- ---------- --PNLFFFXX bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000384197/1-1036 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000384197/1-1036 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000384197/1-1036 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000384197/1-1036 ---------- ---------N NQEGTSTEGI YVSKILENGP ADRADGLEIH ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 XXXXXXXXXX XXXXXXXXXD NQEETPMEGI YVSKILENGP ADRADGLEIH bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000384197/1-1036 DKIMEVNGKD LSKATHEEAV EAFRNAKEPI VVQVLRRTPL SRPAYGMASE ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 DKIIEVNGKD LSKATHEEAV EAFRNAKEPI VVQVLRRTPL SKPAYGTAPE bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000384197/1-1036 VQLMNASTQT DITFEHIMAL AKLRPPTPPV PDICPFLLSD SCHSLHPMEH ENSBTAP00000016758/1-638 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007046/1-1035 VRLVNASTQT DITFEHIMAL AKLRPPTPPV PDICPFLLSD SCHSLHPMEH bmy_21618T0/1-637 ---------- ---------- ---------- ---------- ---------- BACU002217/1-692 ---------- -------MAL AKLRPPTPPV PDICPFLLSD SCHSLHPMER 551 600 ENSP00000384197/1-1036 EFYEDNEYIS SLPADADRTE DFEYEEVELC RVSSQEKLGL TVCYRTDDEE ENSBTAP00000016758/1-638 ---------- ---------- ----QEVELC RVSSQEKLGL TVCYRTDDEE ENSTTRP00000007046/1-1035 EFYEDDEYLS SLPADADRTE DFEYEEVELC RVNSQEKLGL TVCYRTDDEE bmy_21618T0/1-637 ---------- ---------- -FFSQEVELC RVNSQEKLGL TVCYRTDDEE BACU002217/1-692 EFYEDNEYLS SLPADADRTE DFEYEEVELC RVNSQEKLGL TVCYRTDDEE 601 650 ENSP00000384197/1-1036 DTGIYVSEVD PNSIAAKDGR IREGDRILQI NGEDVQNREE AVALLSNDEC ENSBTAP00000016758/1-638 DTGIYVSKVD PNSIAAKDGR IREGDHILQI NGEDVQDREA AVAQLSSDEC ENSTTRP00000007046/1-1035 DTGIYVSEVD PNSIAAKDGR IREGDRILQI NGEDAQDREA AVALLSSDEC bmy_21618T0/1-637 DTGIYVSEVD PNSIAAKDGR IREGDRILQI NGEDVQDREA AVALLSSDEC BACU002217/1-692 DTGIYVSEVD PNSIAAKDGR IREGDRILQI NGEDVQDQEA AVALLSSDEC 651 700 ENSP00000384197/1-1036 KRIVLLVARP EIQLDEGWLE DERNEFLEEL NLEMLEEEHN EAMQPTA--N ENSBTAP00000016758/1-638 RRILLLVARP ESQVDEGWLE DERNELLEEL NLAMLEEQHN EVMQRTAVTP ENSTTRP00000007046/1-1035 RRIVLLVARP ESQLEEGWLE DERNEYLEEL NLSMLEEQHN EAMQRTA--S bmy_21618T0/1-637 RRIVLLVARP ESQLDEGWLE DERNEYLEEL NLSMLEEQHN EAMQXTA--G BACU002217/1-692 RRIVLLVARP ESQLDEGWLE DERNEYLEEL NLSMLEEQHN EAMQRTA--G 701 750 ENSP00000384197/1-1036 EVEQPKKQEE EEGTTDTATS SSNNHEKDSG VGRTDESLRN DESSEQENAA ENSBTAP00000016758/1-638 PPQKPKKQEE EEGTTDTATS SSNNHEKDSG VGRTDESLRN DESSEQENAT ENSTTRP00000007046/1-1035 QVEQPKKQEE EEGTTDTATS SSNNHEKDSG VGRTDESLRN DESSEQENAA bmy_21618T0/1-637 EMEQPKKQEE EEGTTDTATS SSNNHEKDSG VGRTDESLRN DESSEQENAA BACU002217/1-692 EVEQPKKQEE EEGTTDTATS SSNNHEKDSG VGRTDESLRN DESSEQENAA 751 800 ENSP00000384197/1-1036 EDPNSTSLKS KRDLGQSQDT LGSVELQYNE SLVSGEYIDS DCIGNPDEDC ENSBTAP00000016758/1-638 EDPNGTSLKS KRELGQSQDT LGSVELQCNE SFVSGEYIDS DCIGNQDEEC ENSTTRP00000007046/1-1035 EDPNGTSLKS KRELGQSQDT LGSTELQCNE SFVSGEYIDS DCTGNQDEEC bmy_21618T0/1-637 EDPNGTSLKS KRELGQSQDT LGSVELQCNE SFVSGEYIDS DCXGNQDEEC BACU002217/1-692 EDPNGTSLKS KRELGQSQDT LGSIELQCNE SFVSGEYIDS DCIGNQDEEC 801 850 ENSP00000384197/1-1036 ERFRQLLELK CKIRNHGEYD LYYSSSTIEC NQGEQEGVEH ELQLLNEELR ENSBTAP00000016758/1-638 ERFRQLLELK CKIRKHGEYD LYYSSSTIEC NQGGREGVEH ELQLLNEELR ENSTTRP00000007046/1-1035 ERFRQLLELK CKIRKHGEYD LYYSSSTIEC NQGGREGVEH ELQLLNEELR bmy_21618T0/1-637 ERFRQLLELK CKIRKHGEYD LYYSSSTIEC NQGGREGVEH ELQLLNEELR BACU002217/1-692 ERFRQLLELK CKIRKHGEYD LYYSSSTIEC NQGGREGVEH ELQLLNEELR 851 900 ENSP00000384197/1-1036 NIELECQNIM QAHRLQKVTD QYGDIWTLHD GGFRNYNTSI DMQRGKLDDI ENSBTAP00000016758/1-638 NIELECQTIM QTHRLQKVTD QYGDIWALHD GGFRSYNTSI DTQRGKLDDI ENSTTRP00000007046/1-1035 NIELECQNIM QAHRLRKVTD QYGDIWALHE GGFRNYNTSI DTQRGKLDDI bmy_21618T0/1-637 NIELECQNIM QAHRLRKVTD QYGDXWALHD GGFRNYNTSI DTQRGKLDDI BACU002217/1-692 NIELECQNIM QAHRLRKVTD QYGDIWALHD GGFRNYNTSI DTQRGKLDDI 901 950 ENSP00000384197/1-1036 MEHPEKSDKD SSSAYNTAES CRSTPLTVDR SPDSSLPRVI NLTNKKNLRS ENSBTAP00000016758/1-638 LEHPEKSDKD SSSAYNTAES CRSTPLTVDR SPDSSLPRVI SLTNKKNLRS ENSTTRP00000007046/1-1035 LEHPEKSDKD SSSAYNTAES CRSTPLTVDR SPDSSLPRVI NLTNKKNLRS bmy_21618T0/1-637 LEHPEKSDKD SSSAYNTAES CRSTPLTVDR SPDSSLPRMI NLTNKKNLRS BACU002217/1-692 LEHPEKSDKD SSSAYNTAES CRSTPLTVDR SPDSSLPRMI NLTNKKNLRS 951 1000 ENSP00000384197/1-1036 TMAATQSSSG QSSKESTSTK AKTTEQGCSA ESKE-KVLEG SKLPDQEKAV ENSBTAP00000016758/1-638 TMAANQSSSG QNTKESTCTK AKTSEQGCVI EGKE-KTSES SKLSDPEKTS ENSTTRP00000007046/1-1035 TMAANQSSSG QSSKES--TK AKTTEQGCGI EGKE-KTSES SKLSDPEKTS bmy_21618T0/1-637 TMAANQSSSG QSSKES--TK AKTTEQGCGV EGKE-KXSES SKLSDPEKTS BACU002217/1-692 TMAANQSSSG QSSKES--TK AKTTEQGCSV EGKEKKTSES SKLSDPEKTS 1001 1050 ENSP00000384197/1-1036 SEHIPYLSPY HSSSYRYANI PAHARHYQSY MQLIQQKSAV EYAQSQLSLV ENSBTAP00000016758/1-638 SEHIPYLSPY HSSSYRYANI PAHARHYQSY MQLIQQKSAV EYAQSQLSLV ENSTTRP00000007046/1-1035 GEHIPYLSPY HSSSYRYANI PAHARHYQSY MQLIQQKSAV EYAQSQLSLV bmy_21618T0/1-637 GEHIPYLSPY HSSSYRYANI PAHARHYQSY MQLIQQKSAV EFAQSQLSLV BACU002217/1-692 GEHIPYLSPY HSSSYRYANI PAHARHYQSY MQLIQQKSAV EFTQSQLSLV 1051 1100 ENSP00000384197/1-1036 SMCKESQKCS EPKMEWKVKI RSDGTRYITK RPVRDRILKE RALKIKEERS ENSBTAP00000016758/1-638 SVCKESQKCS EPKMEWKVKI RSDGTRYITK RPVRDRILKE RALKIKEERS ENSTTRP00000007046/1-1035 SVCKESQKCS EPKMEWKVKI RSDGTRYITK RPVRDRILKE RALKIKEERS bmy_21618T0/1-637 SVCKESQKCS EPKMEWKVKI RSDGTRYITK RPVRDRILKE RALKIKEERS BACU002217/1-692 SVCKESQKCS EPKMEWKVKI RSDGTRYITK RPVRDRILKE RALKIKEERS 1101 1150 ENSP00000384197/1-1036 GMTTDDDTMS EMKMGRYWSK EERKQHLVRA KEQRRRREFM MRSRLECLKE ENSBTAP00000016758/1-638 GMTTDDDTMS EMKMGRYWSK EERKQHLVRA KEQRRRREFM MRSRLECLKE ENSTTRP00000007046/1-1035 GMTTDDDTMS EMKMGRYWSK EERKQHLVRA KEQRRRREFM MRSRLECLKE bmy_21618T0/1-637 GMTTDDDTMS EMKMGRYWSK EERKQHLVRA KEQRRRREFM MRSRLECLKE BACU002217/1-692 GMTTDDDTMS EMKMGRYWSK EERKQHLVRA KEQRRRREFM MRSRLECLKE 1151 1200 ENSP00000384197/1-1036 SPQSGSEGKK EINIIELSHK KMMKKRNKKI LDNWMTIQEL MTHGAKSPDG ENSBTAP00000016758/1-638 SPQSGSEGKK EVNIIELSHK KMMKKRNKKI LDNWMTIQEL MTHGAKSPDG ENSTTRP00000007046/1-1035 SPQSGSEGKK EVNIIELSHK KMMKKRNKKI LDNWMTIQEL MTHGAKSPDG bmy_21618T0/1-637 SPQSGSEGKK EVNIIELSHK KMMKKRNKKI LDNWMTIQEL MTHGAKSPDG BACU002217/1-692 SPQSGSEGKK EVNIIELSHK KMMKKRNKKI LDNWMTIQEL MTHGAKSPDG 1201 1250 ENSP00000384197/1-1036 TRVHNAFLSV TTV ENSBTAP00000016758/1-638 TQVPNAFLSV TTV ENSTTRP00000007046/1-1035 TQVPNAFLSV TAV bmy_21618T0/1-637 TRVPNAFLSV TTV BACU002217/1-692 TRVPNAFLSV TTV