KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:40 2014 Check: 00 .. Name: ENSBTAP00000016760/1-387 Len: 388 Check: 4293 Weight: 1.00 Name: ENSP00000360776/1-388 Len: 388 Check: 3353 Weight: 1.00 Name: ENSTTRP00000004045/1-349 Len: 388 Check: 1204 Weight: 1.00 Name: bmy_02932T0/1-359 Len: 388 Check: 9740 Weight: 1.00 Name: BACU011338/1-349 Len: 388 Check: 2234 Weight: 1.00 // 1 50 ENSBTAP00000016760/1-387 -GCFPKMMVI GQLICFLVCF LLLTASELTP FLSPSVSTVN TYLFMMQAQG ENSP00000360776/1-388 MRARRGLLRL PRRSLLAALF FFSLSSSLLY FVYVAPGIVN TYLFMMQAQG ENSTTRP00000004045/1-349 ---------- ---------- ---------- ---------N TYLFMMQAQG bmy_02932T0/1-359 --MDEQVLTL S--------- ---------- --------VN TYLFMMQAQG BACU011338/1-349 ---------- ---------- ---------- ---------N TYLFMMQAQG 51 100 ENSBTAP00000016760/1-387 ILIRDNMRTI GAQVYEQVVR SAYAKRNSSV NDSDYPLDLN HSESFLQTTT ENSP00000360776/1-388 ILIRDNVRTI GAQVYEQVLR SAYAKRNSSV NDSDYPLDLN HSETFLQTTT ENSTTRP00000004045/1-349 ILIRDNMRTI GAQVYEQVVR SAYAKRNSSV NDSDYPLDLN HSETFLQTTT bmy_02932T0/1-359 ILIRDNMRTI GAQVYEQVVR SAYAKRNSSV NDSDYPLDLN HSETFLQTTT BACU011338/1-349 ILIRDNMRTI GAQVYEQVVR SAYAKRNSSV NDSDYPLDLN HSETFLQTTT 101 150 ENSBTAP00000016760/1-387 FLPEDFTYFA NHTCPERLPS MKGPIDINMS EIGMDAIHEL FSKDPTIKLG ENSP00000360776/1-388 FLPEDFTYFA NHTCPERLPS MKGPIDINMS EIGMDYIHEL FSKDPTIKLG ENSTTRP00000004045/1-349 FLPEDFTYFA NHTCPERLPS MKGPIAINMS EIGMDAIHEL FSKDPTIKLG bmy_02932T0/1-359 FLPEDFTYFA NHTCPERLPS MKGPIAINMS EIGMDAIHEL FSKDPTIKLG BACU011338/1-349 FLPEDFTYFA NHTCPERLPS MKGPIAINMS EIGMDAIHEL FSKDPTIKLG 151 200 ENSBTAP00000016760/1-387 GHWKPSDCVP RWKVAILVPF RNRHEHLPVL LRHLIPMLQR QRLRFAFYVV ENSP00000360776/1-388 GHWKPSDCMP RWKVAILIPF RNRHEHLPVL FRHLLPMLQR QRLQFAFYVV ENSTTRP00000004045/1-349 GHWKPSDCIP RWKVAILIPF RNRHEHLPVL LRHLIPMLQR QRLQFAFYVV bmy_02932T0/1-359 GHWKPSDCIP RWKVAILIPF RNRHEHLPVL LRHLIPMLQR QRLQFAFYVV BACU011338/1-349 GHWKPSDCIP RWKVAILIPF RNRHEHLPVL LRHLIPMLQR QRLQFAFYVV 201 250 ENSBTAP00000016760/1-387 EQVGTQPFNR AMLFNVGFQE AMKDLDWDCL IFHDVDHIPE SDRNYYGCGQ ENSP00000360776/1-388 EQVGTQPFNR AMLFNVGFQE AMKDLDWDCL IFHDVDHIPE SDRNYYGCGQ ENSTTRP00000004045/1-349 EQVGTQPFNR AMLFNVGFQE AMKDLDWDCL IFHDVDHIPE SDRNYYGCGQ bmy_02932T0/1-359 EQVGTQPFNR AMLFNVGFQE AMKDLDWDCL IFHDVDHIPE SDRNYYGCGQ BACU011338/1-349 EQVGTQPFNR AMLFNVGFQE AMKDLDWDCL IFHDVDHIPE SDRNYYGCGQ 251 300 ENSBTAP00000016760/1-387 MPRHFATKLD KYMYLLPYTE FFGGVSGLTV EQFRKINGFP NAFWGWGGED ENSP00000360776/1-388 MPRHFATKLD KYMYLLPYTE FFGGVSGLTV EQFRKINGFP NAFWGWGGED ENSTTRP00000004045/1-349 MPRHFATKLD KYMYLLPYTE FFGGVSGLTV EQFRKINGFP NAFWGWGGED bmy_02932T0/1-359 MPRHFATKLD KYMYLLPYTE FFGGVSGLTV EQFRKINGFP NAFWGWGGED BACU011338/1-349 MPRHFATKLD KYMYLLPYTE FFGGVSGLTV DQFRKINGFP NAFWGWGGED 301 350 ENSBTAP00000016760/1-387 DDLWNRVQNA GYSVSRPEGD TGKYKSIPHH HRGEVQFLGR YALLRKSKER ENSP00000360776/1-388 DDLWNRVQNA GYSVSRPEGD TGKYKSIPHH HRGEVQFLGR YALLRKSKER ENSTTRP00000004045/1-349 DDLWNRVQNA GYSVSRPEGD AGKYKSIPHH HRGEVQFLGR YALLRKSKER bmy_02932T0/1-359 DDLWNRVQNA GYSVSRPEGD TGKYKSIPHH HRGEVQFLGR YALLRKSKER BACU011338/1-349 DDLWNRVQNA GYSVSRPEGD TGKYKSIPHH HRGEVQFLGR YALLRKSKER 351 400 ENSBTAP00000016760/1-387 QAVDGLNNLN YFANVTYDAL YKNITVNLTP ELAQVTEY ENSP00000360776/1-388 QGLDGLNNLN YFANITYDAL YKNITVNLTP ELAQVNEY ENSTTRP00000004045/1-349 QGLDGLNNLN YFANITYDAL YKNITVNLTP ELAQVTEY bmy_02932T0/1-359 QGLDGLNNLN YFANITYDAL YKNITVNLTP ELAQVTEY BACU011338/1-349 QGLDGLNNLN YFANITYDAL YKNITVNLTP ELAQVTEY