KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:41 2014 Check: 00 .. Name: ENSTTRP00000008626/1-573 Len: 681 Check: 1578 Weight: 1.00 Name: ENSP00000278379/1-574 Len: 681 Check: 7694 Weight: 1.00 Name: bmy_18688T0/1-665 Len: 681 Check: 3347 Weight: 1.00 Name: BACU008902/1-574 Len: 681 Check: 9270 Weight: 1.00 Name: ENSBTAP00000016762/1-576 Len: 681 Check: 7797 Weight: 1.00 // 1 50 ENSTTRP00000008626/1-573 ---------- ---------- ---------- ---------- ---------- ENSP00000278379/1-574 ---------- ---------- ---------- ---------- ---------- bmy_18688T0/1-665 MPEAVEPPRL GRAAGSKPPA GKGQPWVVLT CPFLPPTGFS NADTAVLMLD BACU008902/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016762/1-576 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008626/1-573 ---------- -MASTEGANN MPKQVEVRMH DSHLSSEELK PRHLGLRLCD ENSP00000278379/1-574 ---------- -MASTEGANN MPKQVEVRMH DSHLGSEEPK HRHLGLRLCD bmy_18688T0/1-665 TFITSCGSCQ NVWFKYFANN MPKQVEVRMH DSHLSSEEPK PRHLGLHLCD BACU008902/1-574 ---------- -MHKKSSANN MPKQVEVRMH DNHLSSEEPK PRHLGLRLCD ENSBTAP00000016762/1-576 ---------H CLYFCFSANN MPKQVEVRMH DSHLSAEEPK PRHLGLRLCD 101 150 ENSTTRP00000008626/1-573 KLGKNLLLTL TVFXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000278379/1-574 KLGKNLLLTL TVFGVILGAV CGGLLRLASP IHPDVVMLIA FPGDILMRML bmy_18688T0/1-665 KLGKNLLLTL TVFGVVLGAV CGGLLRLASP IHPDVVMLIA FPGDILMRML BACU008902/1-574 KLGKNLLLTL TVFGVVLGAV CGGLLRLASP IHPDVVMLIA FPGDILMRML ENSBTAP00000016762/1-576 KLGKNLLLTL TVFGVILGAV CGGLLRLASP IHPDVVMLIA FPGDILMRML 151 200 ENSTTRP00000008626/1-573 XXXXXXXXXX XXXXXLSGLD AKASGRLGTR AMVYYMSTTI IAAVLGVILV ENSP00000278379/1-574 KMLILPLIIS SLITGLSGLD AKASGRLGTR AMVYYMSTTI IAAVLGVILV bmy_18688T0/1-665 KMLILPLIIS SLITGLSGLD AKASGRLGTR AMVYYMSTTI IAAVLGVILV BACU008902/1-574 KMLILPLIIS SLITGLSGLD AKASGRLGTR AMVYYMSTTI IAAVLGVILV ENSBTAP00000016762/1-576 KMLILPLIIS SLITGLSGLD AKASGRLGTR AMVYYMSTTI IAAVLGVILV 201 250 ENSTTRP00000008626/1-573 LAIHPGNPKL KKQLGPGQKN DEVSSLDAFL DLIRNLFPEN LVQACFQQ-- ENSP00000278379/1-574 LAIHPGNPKL KKQLGPGKKN DEVSSLDAFL DLIRNLFPEN LVQACFQQ-- bmy_18688T0/1-665 LAIHPGNPKL KKQLGPGQKN DEVSSLDAFL DLIRNLFPEN LVQACFQQRC BACU008902/1-574 LAIHPGNPKL KKQLGPGQKN DEVSSLDAFL DLIRNLFPEN LVQACFQQ-- ENSBTAP00000016762/1-576 LAIHPGNPKL KKQLGPGKKN DEVSSLDAFL DLIRNLFPEN LVQACFQQ-- 251 300 ENSTTRP00000008626/1-573 ---------- ---------- ---XXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000278379/1-574 ---------- ---------- ---IQTVTKK VLVAPPPDEE ANATSAVVSL bmy_18688T0/1-665 PDQGGHELPV AIQLGLPFSL HKCMWPVTKK VLVAPPSDED SNATNAVLSL BACU008902/1-574 ---------- ---------- ---IQTVTKK VLVAPPSDEE SNATSAVLSL ENSBTAP00000016762/1-576 ---------- ---------- ---IQTVTKK VLVAPPSDED GNATNAVLSL 301 350 ENSTTRP00000008626/1-573 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXEQAK ENSP00000278379/1-574 LNETVTEVPE ETKMVIKKGL EFKDGMNVLG LIGFFIAFGI AMGKMGDQAK bmy_18688T0/1-665 LNETVTEPPE ETQVVIKKGL EFKDGMNVLG LIGFFIAFGI AMGKMGEQAK BACU008902/1-574 LNETVTEPPE ETQVVIKKGL EFKDGMNVLG LIGFFIAFGI AMGKMGEQAK ENSBTAP00000016762/1-576 LNETVTEVPE ETQVVIKKGL EFKDGMNVLG LIGFFIAFGI AMGKMGEQAK 351 400 ENSTTRP00000008626/1-573 LMVEFFNILN EIVMKLVIMI MXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000278379/1-574 LMVDFFNILN EIVMKLVIMI MWYSPLGIAC LICGKIIAIK DLEVVARQLG bmy_18688T0/1-665 LMVEFFNILN EIVMKLVIMI MWYSPLGIAC LICGKIIAIK DLEVVARQLG BACU008902/1-574 LMVEFFNILN EIVMKLVIMI MWYSPLGIAC LICGKIIAIK DLEVVARQLG ENSBTAP00000016762/1-576 LMVEFFNILN EIVMKLVIMI MWYSPLGIAC LICGKIIAIK DLEVVARQLG 401 450 ENSTTRP00000008626/1-573 XXXXXXXXXX XXXXXXXLPL IYFLVIRKNP F-FFAGIFQA WITALGTASS ENSP00000278379/1-574 MYMVTVIIGL IIHGGIFLPL IYFVVTRKNP FSFFAGIFQA WITALGTASS bmy_18688T0/1-665 MYMITVIVGL IIHGGIFLPL IYFLVTRKNP FSFFAGIFQA WITALGTASS BACU008902/1-574 MYMITVIVGL IIHGGIFLPL IYFLVTRKNP FSFFAGIFQA WITALGTASS ENSBTAP00000016762/1-576 MYMITVIVGL IIHGGIFLPL IYFLVTRKNP FSFFAGIFQA WITALGTASS 451 500 ENSTTRP00000008626/1-573 AGTLPVTFRC LEENLGIDKR VTRFVLPVGA TINMDGTALY EAVAAIFIAQ ENSP00000278379/1-574 AGTLPVTFRC LEENLGIDKR VTRFVLPVGA TINMDGTALY EAVAAIFIAQ bmy_18688T0/1-665 AGTLPVTFRC LEENLGIDKR VTRFVLPVGA TINMDGTALY EAVAAIFIAQ BACU008902/1-574 AGTLPVTFRC LEENLGIDKR VTRFVLPVGA TINMDGTALY EAVAAIFIAQ ENSBTAP00000016762/1-576 AGTLPVTFRC LEENLGIDKR VTRFVLPVGA TINMDGTALY EAVAAIFIAQ 501 550 ENSTTRP00000008626/1-573 MNGVILDGGQ IVTV------ ---------- -----SLTAT LASVGAASIP ENSP00000278379/1-574 MNGVVLDGGQ IVTV------ ---------- -----SLTAT LASVGAASIP bmy_18688T0/1-665 MNGVILDGGQ IVTVRATLTL FEPCDIFSEL DVMMGGLTAT LASVGAASIP BACU008902/1-574 MNGVILDGGQ IVTV------ ---------- -----SLTAT LASVGAASIP ENSBTAP00000016762/1-576 MNGVVLDGGQ IVTV------ ---------- -----SLTAT LASVGAASIP 551 600 ENSTTRP00000008626/1-573 SAGLVTMLLI LTAVGLPTED ISLLVAVDWL LDRMRTSVNV VGDSFGAGIV ENSP00000278379/1-574 SAGLVTMLLI LTAVGLPTED ISLLVAVDWL LDRMRTSVNV VGDSFGAGIV bmy_18688T0/1-665 SAGLVTMLLI LTAVGLPTED ISLLVAVDWL LIKTKQN--- ---------- BACU008902/1-574 SAGLVTMLLI LTAVGLPTED ISLLVAVDWL LDRMRTSVNV VGDSFGAGIV ENSBTAP00000016762/1-576 SAGLVTMLLI LTAVGLPTED ISLLVAVDWL LDRMRTSVNV VGDSFGAGIV 601 650 ENSTTRP00000008626/1-573 YHLSKSELDT IDSQHRVHED IEMTKTQSIY DDMKNHRENN SNQCVYAAHN ENSP00000278379/1-574 YHLSKSELDT IDSQHRVHED IEMTKTQSIY DDMKNHRESN SNQCVYAAHN bmy_18688T0/1-665 ---KQSELDT IDSQHRVHED IEMTKTQSIY DDMKNHRENN SNQCVYAAHN BACU008902/1-574 YHLSKSELDT IDSQHRVHED IEMTKTQSIY DDMKNHRENN SNQCVYTAHN ENSBTAP00000016762/1-576 YHLSKSELDT IDSQHRVHED IEMTKTQSIY DDLKNHRESN SNQCVYAAHN 651 700 ENSTTRP00000008626/1-573 SVIVDECKVT LAASGKSADC SVEEEPWKRE K ENSP00000278379/1-574 SVIVDECKVT LAANGKSADC SVEEEPWKRE K bmy_18688T0/1-665 SVIVDECKVT LAANGKSADC SVDEEPWKRE K BACU008902/1-574 SVIVDECKVT LAANGKSADC SVDEEPWKRE K ENSBTAP00000016762/1-576 SVIVDECKVT LAANGKSADC SVEEEPWKHE K