KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:42 2014 Check: 00 .. Name: ENSTTRP00000008650/1-726 Len: 737 Check: 1281 Weight: 1.00 Name: ENSP00000278360/1-737 Len: 737 Check: 9046 Weight: 1.00 Name: ENSBTAP00000016767/1-720 Len: 737 Check: 6089 Weight: 1.00 Name: bmy_18687T0/1-463 Len: 737 Check: 1436 Weight: 1.00 Name: BACU008903/1-680 Len: 737 Check: 5084 Weight: 1.00 // 1 50 ENSTTRP00000008650/1-726 MELGWWPQLG LTFLQLLLIS SLPREYTVIN EGCPGAEWNI MCRECCEYDQ ENSP00000278360/1-737 MELGCWTQLG LTFLQLLLIS SLPREYTVIN EACPGAEWNI MCRECCEYDQ ENSBTAP00000016767/1-720 MELGWWPQLG LAFLQLLLIS SLPREYTVIN EACPGAEWNI MCRECCEYDQ bmy_18687T0/1-463 ---------- ---------- ---------- ---------- -------MDR BACU008903/1-680 ---------- ---------- ---------- ---------- MCRECCEYDQ 51 100 ENSTTRP00000008650/1-726 VKCACPGKKE VVGYTIPCCR NEENECDSCL IHPGCTIFEN CKTCRNGSWG ENSP00000278360/1-737 IECVCPGKRE VVGYTIPCCR NEENECDSCL IHPGCTIFEN CKSCRNGSWG ENSBTAP00000016767/1-720 IKCECPGKKE VVGYTIPCCR NEENECDSCL IHPGCTIFEN CKTCRNGSWG bmy_18687T0/1-463 ---------- ---------- ---------- ---------- ---------- BACU008903/1-680 VTCACPGKKE VVGYTIPCCR NEENECDSCL IHPGCTIFEN CKTCRNGSWG 101 150 ENSTTRP00000008650/1-726 GTLDDFYVKG IYCAECHAGW YGGDCMRCGQ ILRVPKGQIL LES-PLNAHC ENSP00000278360/1-737 GTLDDFYVKG FYCAECRAGW YGGDCMRCGQ VLRAPKGQIL LESYPLNAHC ENSBTAP00000016767/1-720 GTLDDFYVKG IYCAECRAGW YGGDCMRCGQ VLRVPKGQIL LESYPLNAHC bmy_18687T0/1-463 ---------- ---------- ---------- ------G--- ---------- BACU008903/1-680 GTLDDFYVKG IYCAECHAGW YGGDCMRCGQ VLRVPKGQIL LESYPLNAHC 151 200 ENSTTRP00000008650/1-726 EWTIHTKPGF IIQLRIIMLS LEFDYMCQYD YVEVRDGDSS DSQIIRRFCG ENSP00000278360/1-737 EWTIHAKPGF VIQLRFVMLS LEFDYMCQYD YVEVRDGDNR DGQIIKRVCG ENSBTAP00000016767/1-720 EWTIHAKPGF IIQLRIVMLS LEFDYMCQYD YVEVRDGDSS DSQIIKRFCG bmy_18687T0/1-463 ---------- ---------- ---------- ---------- ---------- BACU008903/1-680 EWTIHAKPGF VIQLRVVMLS LEFDYMCQYD YVEVRDGDSS DSQIIRRFCG 201 250 ENSTTRP00000008650/1-726 NERPAPIRSS GSSLHVLFHS DGSKNFDGFH AVFEEITACS SAPCFHDGSC ENSP00000278360/1-737 NERPAPIQSI GSSLHVLFHS DGSKNFDGFH AIYEEITACS SSPCFHDGTC ENSBTAP00000016767/1-720 NERPAPIRST GSSLHILFHS DGSKNFDGFH AIFEEITACS SSPCFHDGTC bmy_18687T0/1-463 ---------- --SLRILFKS ---------- -IIGEV---- ---------- BACU008903/1-680 NERPAPIRST GPSLHVLFHS DGSKNFDGFH AIFEEITACS SSPCFHDGTC 251 300 ENSTTRP00000008650/1-726 LLDNTGSYKC ACLAGYTGQR CENVV----- ----SDNSLS VLEERNCSDP ENSP00000278360/1-737 VLDKAGSYKC ACLAGYTGQR CENLLEAGKS KIKASEDSLS VLEERNCSDP ENSBTAP00000016767/1-720 LLDSTGSYKC ACLAGYTGKH CENL------ ---------- -LEERNCSDP bmy_18687T0/1-463 ---------- ---------- ---------- ---------- -LEERNCSDP BACU008903/1-680 LLDNTGSYKC ACLAGYTGQH CENL------ ---------- -LEERNCSDP 301 350 ENSTTRP00000008650/1-726 GGPVNGYKKI TGGPELINGR YAKIGTVLTF FCNNSYVLSG NEMRTCQQNG ENSP00000278360/1-737 GGPVNGYQKI TGGPGLINGR HAKIGTVVSF FCNNSYVLSG NEKRTCQQNG ENSBTAP00000016767/1-720 GGPVNGYKKI TGGPGLIHGH YAKIGTVLTF FCNSSYVLSG NEMRTCQQNG bmy_18687T0/1-463 GDPVNGYKKI TGGPGLINGR YAKIGTVLTF FCNNSYVLSG NEMRTCQQNG BACU008903/1-680 GDPVNGYKKI TGGPGLINGR YAKIGTVLTF FCNNSYVLSG NEMRTCQQNG 351 400 ENSTTRP00000008650/1-726 EWSGKQPICI KACREPKISD LVRRRVLPMQ VQSRETPLHQ LYSSAFSKQK ENSP00000278360/1-737 EWSGKQPICI KACREPKISD LVRRRVLPMQ VQSRETPLHQ LYSAAFSKQK ENSBTAP00000016767/1-720 EWSGKQPICI KACREPKISD LVRRKVLPMQ VQSRETPLHQ LYSSAFSKQK bmy_18687T0/1-463 EWSGKQPICI KACREPKISD LVRRRVLPMQ VQSRETPLHQ LYSSAFSKQK BACU008903/1-680 EWSGKQPICI KACREPKISD LVRRRVLPMQ VQSRETPLHQ LYSSAFSKQK 401 450 ENSTTRP00000008650/1-726 LQDSSTKKPA LPFGDLPPGY QYLHTQIQYE CISPFYRRLG SSRRTCLRTG ENSP00000278360/1-737 LQSAPTKKPA LPFGDLPMGY QHLHTQLQYE CISPFYRRLG SSRRTCLRTG ENSBTAP00000016767/1-720 LQDAPTKKPV LPFGDLPPGY QHLHTQLQYE CISPFYRRLG SSRRTCLRTG bmy_18687T0/1-463 LQDASTKKPA LPFGDLPPGY QYLHTQIQYE CISPFYRRLG SSRRTCLRTG BACU008903/1-680 LQDASTKKPA LPFGDLPPGY QYLHTQIQYE CISPFYRRLG SSRRTCLRTG 451 500 ENSTTRP00000008650/1-726 KWSGRAPSCI PICGKTENVT APXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000278360/1-737 KWSGRAPSCI PICGKIENIT APKTQGLRWP WQAAIYRRTS GVHDGSLHKG ENSBTAP00000016767/1-720 KWSGRAPSCI PICGKTENVS APKTQGTRWP WQAAIYRRAG GVHGGGLHKD bmy_18687T0/1-463 KWSGRAPSCI PICGKTENVT APKTQRTRWP WQAAIYRRAG GVHGSSLHKD BACU008903/1-680 KWSGRAPSCI PICGTTENVT APKTQRARWP WQAAIYRRAG GAQGSSLHKD 501 550 ENSTTRP00000008650/1-726 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000278360/1-737 AWFLVCSGAL VNERTVVVAA HCVTDLGKVT MIKTADLKVV LGKFYRDDDR ENSBTAP00000016767/1-720 AWFLVCSGAL VNERTVVVAA HCVTDLGRVT VIKTADLKVV LGKFYRDDDR bmy_18687T0/1-463 TWFLVCSGAL VNERTVVVAA HCVTDLGRVT VIKTADLKVV LGKFYRDDDR BACU008903/1-680 TWLLVCSGAL VNERTVVVSA HCVTDLGRVA VIKTADLKVV LGKFYRDEDR 551 600 ENSTTRP00000008650/1-726 XXXXXXXXXI SAIILHPNYD PILLDVDIAV LKLLDKARIS TRVQPICLAA ENSP00000278360/1-737 DEKTIQSLQI SAIILHPNYD PILLDADIAI LKLLDKARIS TRVQPICLAA ENSBTAP00000016767/1-720 DEKSIQSLRI SAIILHPNYD PILLDMDIAI LKLLDKARMS TRVQPICLAA bmy_18687T0/1-463 EEKSIQSLRI SAIILHPNYD PILLDADIAV LKLLDKARIS TRVQPICLAA BACU008903/1-680 EEKSIQSLRI SAIILHPNYD PILLDADIAV LKLLDKARIS TRVQPICLAA 601 650 ENSTTRP00000008650/1-726 PRDLSTSLQE SRITVAGWNV LADARSPGFK NDTLRSGVVS VADSLLCEEQ ENSP00000278360/1-737 SRDLSTSFQE SHITVAGWNV LADVRSPGFK NDTLRSGVVS VVDSLLCEEQ ENSBTAP00000016767/1-720 PRDLSTSFQE SRITVAGWNV LADSRSPGYK DDTLRSGVVR VADSLLCEEQ bmy_18687T0/1-463 PRDLSTSFQE SRITVAGWNV LADVRSPGFK NDTLRSGVVS VADSLLCEEQ BACU008903/1-680 PRDLSTSFQE SRITVAGWNV LADVRSPGFK NDTLRSGVVS VADSLLCEEQ 651 700 ENSTTRP00000008650/1-726 HEEHGXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000278360/1-737 HEDHGIPVSV TDNMFCASWE PTAPSDICTA ETGGIAAVSF PGRASPEPRW ENSBTAP00000016767/1-720 HEAQGIPVSV TDSMFCAGRD PTAPSDICTA ETGGIAAVSF PGRASPEPRW bmy_18687T0/1-463 HEEHGIPVSV TDNMFCAGWD RTAPSDICTA ETGGIAAVFF PGRASPEPRW BACU008903/1-680 HEEHGIPVSV TDNMFCAGWD RTAPSDICTA ETGGIAAVFF PGRASPEPRW 701 750 ENSTTRP00000008650/1-726 XXXXXXXXXX XXXXXXXXXX XXXXXXPF-D WIERNMK ENSP00000278360/1-737 HLMGLVSWSY DKTCSHRLST AFTKVLPFKD WIERNMK ENSBTAP00000016767/1-720 HLVGLVSWSY DKTCSHSLST AFTKVLPFKD WIERNMK bmy_18687T0/1-463 HLVGLVSWSY DKTCSHSLYT AFTKVLPFKD WIERNMK BACU008903/1-680 HLVGLVSWSY DKTCSRSLYT AFTKVLPFKD WIERNMK