KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:59:43 2014  Check: 00 ..

 Name: bmy_22588T0/1-179         Len:    225  Check:  4475  Weight:  1.00
 Name: BACU020134/1-220          Len:    225  Check:  2529  Weight:  1.00
 Name: ENSTTRP00000013110/1-202  Len:    225  Check:  8907  Weight:  1.00
 Name: ENSP00000351380/1-203     Len:    225  Check:  4061  Weight:  1.00
 Name: ENSBTAP00000016796/1-203  Len:    225  Check:  2523  Weight:  1.00

//


                          1                                                   50
bmy_22588T0/1-179         IFKTCFGSFL THTLFL--P- ---------- --------RL KNEKALRLNL 
BACU020134/1-220          -PKAPKGKRV GQEKKVIHPY SRKAAQITRE AHKQEKKEKL TLVMSSSVG- 
ENSTTRP00000013110/1-202  -PKAPKGKSV GQEKKVIHPY SRKAAQITRE AHKQEKKEXX XXXXXXXXXX 
ENSP00000351380/1-203     MPKAPKGKSA GREKKVIHPY SRKAAQITRE AHKQEKKEKL KNEKALRLNL 
ENSBTAP00000016796/1-203  MPKAPKGKSV GQEKKVIHPY SRKAAQITRK AHKQEKKEKL KNEKALRLNL 


                          51                                                 100
bmy_22588T0/1-179         IGEKLQWFQN HLDPKKVGYS KRDACELIER SARG------ --SGT----- 
BACU020134/1-220          DREKLQWFQN HLDPKKVGYS KRDACELIER YQCKSLDFIQ GLWETQLQQA 
ENSTTRP00000013110/1-202  XXEKLQWFQN HLDPKKVGYS KRDACELIER YLNR------ --FSSELEQI 
ENSP00000351380/1-203     VGEKLQWFQN HLDPQKKRYS KKDACELIER YLNR------ --FSSELEQI 
ENSBTAP00000016796/1-203  IGEKLQWFQN HLDPKKVGYS KRDACELIER YLNR------ --FSSELEQI 


                          101                                                150
bmy_22588T0/1-179         -GAAASVGAG EAAVRGLR-- --------PR EERERQRYGG -CGLGRSGRG 
BACU020134/1-220          PEMVTFLNFR KVTVGGMRKM DEGAGFGWET AERLMKQFQA RYKLFSF--- 
ENSTTRP00000013110/1-202  -ELHNSIKAR ----RGRRHC AREAGIK-QX XEREWRQYRG -CGL------ 
ENSP00000351380/1-203     -ELHNSIRDR ----QGRRHC SRETVIK-QT MERERQQFEG -YGL------ 
ENSBTAP00000016796/1-203  -ELRNSFKDR ----QGRRHC SREAAIR-QT LEREQRQYQA -HGL------ 


                          151                                                200
bmy_22588T0/1-179         SEIPDILNAG NLKTFREWDF DLKKLPNIKM RKICANDAVP KKCKKKTVTA 
BACU020134/1-220          PEIPDILNAG NLKTFREWDF DLKKLPNIKM RKICANDAVP KKCKKKTVTA 
ENSTTRP00000013110/1-202  -EIPDILNAG NLKTFREWDF DLKKLPNIKM RKICANDAVP KKCKKKPVTA 
ENSP00000351380/1-203     -EIPDILNAS NLKTFREWDF DLKKLPNIKM RKICANDAIP KTCKRKTIIT 
ENSBTAP00000016796/1-203  -EIPDILNAD NLKTFREWDF DLKKLPNIKM RKVCASDAVP KKCKKKAVTT 


                          201                                                250
bmy_22588T0/1-179         VDRDLGELEL KDESGDTDEE MTAVA 
BACU020134/1-220          VDRDLGELEL KDESGDTDEE MTAVA 
ENSTTRP00000013110/1-202  VDRDLGELEL KDESSDTDEE MTAVA 
ENSP00000351380/1-203     VDQDLGELEL NDESSDSDEE MTAVA 
ENSBTAP00000016796/1-203  IDGDLGELEL KDESSDTDEE MTAVA