KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:47 2014 Check: 00 .. Name: ENSTTRP00000011463/1-883 Len: 883 Check: 9699 Weight: 1.00 Name: ENSBTAP00000016827/1-883 Len: 883 Check: 6651 Weight: 1.00 Name: bmy_08685T0/1-883 Len: 883 Check: 8212 Weight: 1.00 Name: BACU019900/1-883 Len: 883 Check: 6746 Weight: 1.00 // 1 50 ENSTTRP00000011463/1-883 MLKLWKVVRP ARQLELHRLI LLLIAFSLGS MGFLAYYVST SPKAKEPLPL ENSBTAP00000016827/1-883 MLKLWKVVRP ARQLELHRLI LLLIAFSLGS MGFLAYYVST SPKAKEPLPL bmy_08685T0/1-883 MLKLWKVVRP ARQLELHRLI LLLIAFSLGS MGFLAYYVST SPKAKEPLPL BACU019900/1-883 MLKLWKVVRP ARQLELHRLI LLLIAFSLGS MGFLAYYVST SPKAKEPLPL 51 100 ENSTTRP00000011463/1-883 PLGDCSSGGA AGPGPVRPPV PPRPPRPPET ARTEPVVLVF VESAYSQLGQ ENSBTAP00000016827/1-883 PLGDCSSGAA GGPGPVRPPV PPRPPRPPET ARTEPVVLVF VESAYSQLGQ bmy_08685T0/1-883 PLGDCSSGGA AGPGPVRPPV PPRPPRPPET ARTEPVVLVF VESAYSQLGQ BACU019900/1-883 PLGDCSSGGA AGPGPVRPPV PPRPPRPPET ARTEPVVLVF VESAYSQLGQ 101 150 ENSTTRP00000011463/1-883 EIVAILESSR FRYSTELAPG RGDMPTLTDH TRGRYVLVIY ENLLKYVNLD ENSBTAP00000016827/1-883 EIVAILESSR FRYSTELAPG RGDMPTLTDH TRGRYVLVIY ENLLKYVNLD bmy_08685T0/1-883 EIVAILESSR FRYSTELAPG RGDMPTLTDH TRGRYVLVIY ENLLKYVNLD BACU019900/1-883 EIVAILESSR FRYSTELAPA RGDMPTLTEH TRGRYVLVIY ENLLKYVNLD 151 200 ENSTTRP00000011463/1-883 AWSRELLDRY CVEYGVGIIG FFRAHEHSLL SAQLKGFPLF LHSNLGLQDY ENSBTAP00000016827/1-883 AWSRELLDRY CVEYGVGIIG FFRAHEHSLL SAQLKGFPLF LHSNLGLRDY bmy_08685T0/1-883 AWSRELLDRY CVEYGVGIIG FFRAHEHSLL SAQLKGFPLF LHSNLGLQDY BACU019900/1-883 AWNRELLDQY CVEYGVGIIG FFRAHEHSLL SAQLKGFPLF LHSNLGLQDY 201 250 ENSTTRP00000011463/1-883 QVNPSAPLLH LTRPSRLEPG PLPGDDWTIF QSNHSTYEPV LLASLRPAEP ENSBTAP00000016827/1-883 QVNPTAPLLH LTRPSRLEPG PLPGDDWTIF QSNHSTYEPV LLASLRLAEP bmy_08685T0/1-883 QVNPSAPLLH LTRPSRLEPG PLPGDDWTIF QSNHSTYEPV LLASLRPAEP BACU019900/1-883 QVNPSAPLLH LTRPSRLEPG PLPGDDWTIF QSNHSTYEPV LLASLRPAEP 251 300 ENSTTRP00000011463/1-883 PVPGPLPRRA RLPTVXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXTYL ENSBTAP00000016827/1-883 PVPGPVPRRA RLPTVVQDLG LHDGIQRVLF GHGLSFWLHK LVFVDAVAYL bmy_08685T0/1-883 PVPGPLPRRA RLPTVVQDLG LHDGIQRVLF GHSLSFWLHK LVFVDAVAYL BACU019900/1-883 PVPGPLPRRA RLPTVVQDLG LHDGIQRVLF GHGLSFWLHK LVFVDAVAYL 301 350 ENSTTRP00000011463/1-883 TGKRLCLDLD RYILVDIDDI FVGKEGTRMK VADVEALLTT QNKLRTLVPN ENSBTAP00000016827/1-883 TGKRLCLDLD RYILVDIDDI FVGKEGTRMK VADVEALLTT QNKLRTLVPN bmy_08685T0/1-883 TGKRLCLDLD RYILVDIDDI FVGKEGTRMK VADVEALLTT QNKLRTLVPN BACU019900/1-883 TGKRLCLDLD RYILVDIDDI FVGKEGTRMK VADVEALLTT QNKLRTLVPN 351 400 ENSTTRP00000011463/1-883 FTFNLGFSGK FYHTGTEEED AGDDMLLKHR QEFWWFPHMW SHMQPHLFHN ENSBTAP00000016827/1-883 FTFNLGFSGK FYHTGTEEED AGDDMLLKHR REFWWFPHMW SHMQPHLFHN bmy_08685T0/1-883 FTFNLGFSGK FYHTGTEEED AGDDMLLKHX QEFWWFPHMW SHMQPHLFHN BACU019900/1-883 FTFNLGFSGK FYHTGTEEED AGDDMLLKHR QEFWWFPHMW SHMQPHLFHN 401 450 ENSTTRP00000011463/1-883 RSVLADQMRL NKQFALEHGI PTDLGYAVAP HHSGVYPIHT QLYEAWKSVW ENSBTAP00000016827/1-883 RSVLADQMRL NKQFALEHGI PTDLGYAVAP HHSGVYPIHT QLYEAWKSVW bmy_08685T0/1-883 RSVLADQMRL NKQFALEHGI PTDLGYAVAP HHSGVYPIHT QLYEAWKSVW BACU019900/1-883 RSVLADQMRL NKQFALEHGI PTDLGYAVAP HHSGVYPIHT QLYEAWKSVW 451 500 ENSTTRP00000011463/1-883 GIQVTSTEEY PHLRPARYRR GFIHNGIMVL PRQTCGLFTH TIFYNEYPGG ENSBTAP00000016827/1-883 GIQVTSTEEY PHLRPARYRR GFIHNGIMVL PRQTCGLFTH TIFYNEYPGG bmy_08685T0/1-883 GIQVTSTEEY PHLRPARYRR GFIHNGIMVL PRQTCGLFTH TIFYNEYPGG BACU019900/1-883 GIQVTSTEEY PHLRPARYRR GFIHNGIMVL PRQTCGLFTH TIFYNEYPGG 501 550 ENSTTRP00000011463/1-883 SRELDRSIRG GELFLTVLLN PISIFMTHLS NYGNDRLGLY TFESLVRFLQ ENSBTAP00000016827/1-883 SRELDRSIRG GELFLTVLLN PISIFMTHLS NYGNDRLGLY TFESLVRFLQ bmy_08685T0/1-883 SRELDRSIRG GELFLTVLLN PISIFMTHLS NYGNDRLGLY TFESLVRFLQ BACU019900/1-883 SRELDRSIRG GELFLTVLLN PISIFMTHLS NYGNDRLGLY TFESLVRFLQ 551 600 ENSTTRP00000011463/1-883 CWTRLRLQTL PPVPLARKYF DLFPQERSPL WQNPCDDKRH KDIWSKEKTC ENSBTAP00000016827/1-883 CWTRLRLQTL PPVPLARKYF DLFPQERSPL WQNPCDDKRH KDIWSKEKTC bmy_08685T0/1-883 CWTRLRLQTL PPVPLARKYF DLFPQERSPL WQNPCDDKRH KDIWSKEKTC BACU019900/1-883 CWTQLRLQTL PPVPLARKYF DLFPQERSPL WQNPCDDKRH KDIWSKEKTC 601 650 ENSTTRP00000011463/1-883 DRLPKFLIVG PQKTGTTAIH FFLSLHPAVT GSFPSPSTFE EIQFFSSPNY ENSBTAP00000016827/1-883 DRLPKFLIVG PQKTGTTAIH FFLSLHPAVT SSFPSPSTFE EIQFFNGPNY bmy_08685T0/1-883 DRLPKFLIVG PQKTGTTAIH FFLSLHPAVT SSFPSPSTFE EIQFFSGPNY BACU019900/1-883 DRLPKFLIVG PQKTGTTAIH FFLSLHPAVT SSFPSPSTFE EIQFFSGPNY 651 700 ENSTTRP00000011463/1-883 HKGIDWYMDF FPVPSNASTD FLFEKSATYF DSEVVPRRGA ALLPRAKIIT ENSBTAP00000016827/1-883 HKGIDWYMDF FPVPSNASTD FLFEKSATYF DSEVVPRRGA ALLPRAKIIT bmy_08685T0/1-883 HKGIDWYMDF FPVPSNASTD FLFEKSATYF DSEVVPRRGA ALLPRAKIIT BACU019900/1-883 HKGIDWYMDF FPVPSNASTD FLFEKSATYF DSEVVPRRGA ALLPRAKIIT 701 750 ENSTTRP00000011463/1-883 VLTNPADRAY SWYQHQRAHG DPVALNYTFY HVISASSHAP LALRSLQDRC ENSBTAP00000016827/1-883 VLTNPADRAY SWYQHQRAHG DPVALNYTFY QVISASSQAP PALRSLQNRC bmy_08685T0/1-883 VLTNPADRAY SWYQHQRAHG DPVALNYTFY QVISASSQAP LALRSLQNRC BACU019900/1-883 VLTNPADRAY SWYQHQRAHG DPVALNYTFY QVISASSQAP LALRSLQNRC 751 800 ENSTTRP00000011463/1-883 LVPGYYSTHL QRWLTYYPSG QLLIVDGQEL RTNPAASMES IQKFLGITPF ENSBTAP00000016827/1-883 LVPGYYSTHL QRWLTYFPSG QLLIVDGQEL RTNPAASMES IQKFLGITPF bmy_08685T0/1-883 LVPGYYSTHL QRWLTYYPSG QLLIVDGQEL RTNPAASMES IQKFLGITPF BACU019900/1-883 LVPGYYSTHL QRWLTYYPSG QLLIVDGQEL RTNPAASMES IQKFLGITPF 801 850 ENSTTRP00000011463/1-883 LNYTRTLRFD EDKGFWCQGL EGGKTRCLGK SKGRKYPDMD TESRLFLTDF ENSBTAP00000016827/1-883 LNYTRTLRFD EDKGFWCQGL EGGKTRCLGK SKGRKYPDMD AESRLFLTDF bmy_08685T0/1-883 LNYTRTLRFD EDKGFWCQGL EGGKTRCLGK SKGRKYPDMD TESRLFLTDF BACU019900/1-883 LNYTRTLRFD EDKGFWCQGL EGGKTRCLGK SKGRKYPDMD TESLLFLTDF 851 900 ENSTTRP00000011463/1-883 FRNHNLELSK LLSRLGQPVP SWLREELQHS SPG ENSBTAP00000016827/1-883 FRNHNLELSK LLSRLGQPVP SWLREELQHS SSG bmy_08685T0/1-883 FRNHNLELSK LLSRLGQPVP SWLREELQHS SLG BACU019900/1-883 FRNHNLELSK LLSRLGQPVP SWLREELQHS SLG