KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:50 2014 Check: 00 .. Name: ENSTTRP00000002344/1-625 Len: 625 Check: 6601 Weight: 1.00 Name: bmy_02601T0/1-614 Len: 625 Check: 6104 Weight: 1.00 Name: ENSP00000252599/1-622 Len: 625 Check: 7336 Weight: 1.00 Name: ENSBTAP00000016841/1-623 Len: 625 Check: 3837 Weight: 1.00 // 1 50 ENSTTRP00000002344/1-625 MAATPRAWRG HGRPLPVLLL LLLLALPPLE GPPGAAAYFP EERWSPESPL bmy_02601T0/1-614 MAATPRACRG HGRPLPVLLL LLLLALPPLE GPPGAAAYFP EERWSPESPL ENSP00000252599/1-622 MAAAPRAGRR RGQPLLALLL LLLAPLPP-G APPGADAYFP EERWSPESPL ENSBTAP00000016841/1-623 MAAAPRACKG HGRPLPVLLL LLLLALPPLG GPPGAAAYFP EERWSPESPL 51 100 ENSTTRP00000002344/1-625 QAPRVLVALL ARNAAHALPS TLGALERLRH PRDRTALWVA TDHNSDNTSA bmy_02601T0/1-614 QAPRVLVALL ARNAAHALPA TLGALERLRH PRDRTALWVA TDHNSDNTSA ENSP00000252599/1-622 QAPRVLIALL ARNAAHALPT TLGALERLRH PRERTALWVA TDHNMDNTST ENSBTAP00000016841/1-623 QAPRVLIALL ARNAAHALPA TLGALERLRH PRERTALWVA TDHNADNTSA 101 150 ENSTTRP00000002344/1-625 VLREWLVAVK SLYHSVEWRP AEEPKSYPDE EGPKHWSDSR YEHIMKLRQA bmy_02601T0/1-614 VLREWLVAMK SLYHSVEWRP AEEPKAPAST PAVPS----- ----CGLARL ENSP00000252599/1-622 VLREWLVAVK SLYHSVEWRP AEEPRSYPDE EGPKHWSDSR YEHVMKLRQA ENSBTAP00000016841/1-623 VLREWLVAVK GLYHSVEWRP SEEPRSYPDE EGPKHWSDSR YEHVMKLRQA 151 200 ENSTTRP00000002344/1-625 ALKSARDMWA DYILXXXXXX XXXXXXXXXX LIAENKTVVA PMLDSRAAYS bmy_02601T0/1-614 TLAAHTDAMS GVLQFVDADN LILNPDTLTL LIAENKTVVA PMLDSRAAYS ENSP00000252599/1-622 ALKSARDMWA DYILFVDADN LILNPDTLSL LIAENKTVVA PMLDSRAAYS ENSBTAP00000016841/1-623 ALKSARDMWA DYILFVDADN LILNPDTLTL LIAENKTVVA PMLDSRAAYS 201 250 ENSTTRP00000002344/1-625 NFWCGMTSQG YYKRTPAYIP IRKRDRRGCF AVPMVHSTFL IDLRKAASRN bmy_02601T0/1-614 NFWCGMTSQG YYKRTPAYIP IRKRDRRGCF AVPMVHSTFL IDLRKAASRN ENSP00000252599/1-622 NFWCGMTSQG YYKRTPAYIP IRKRDRRGCF AVPMVHSTFL IDLRKAASRN ENSBTAP00000016841/1-623 NFWCGMTSQG YYKRTPAYIP IRKRERRGCF AVPMVHSTFL IDLRKAASRN 251 300 ENSTTRP00000002344/1-625 LAFYPPHPDY TWSFDDIIVF AFSCKQAEVQ MYVCNKEVYG FLPVPLRAHS bmy_02601T0/1-614 LAFYPPHPDY TWSFDDIIVF AFSCKQAEVQ MYVCNKEVYG FLPVPLRAHS ENSP00000252599/1-622 LAFYPPHPDY TWSFDDIIVF AFSCKQAEVQ MYVCNKEEYG FLPVPLRAHS ENSBTAP00000016841/1-623 LAFYPPHPDY TWSFDDIIVF AFSCKQAEVQ MYVCNKEVYG FLPVPLRSHS 301 350 ENSTTRP00000002344/1-625 TLQDEAESFM HVQLEVMXXX XXXXXXXXXX XXXXXXXXXG FDEVFMINLK bmy_02601T0/1-614 TLQDEAESFM HVQLEVMVKH PPAEPSRFIS VPSKTPDKMG FDEVFMINLK ENSP00000252599/1-622 TLQDEAESFM HVQLEVMVKH PPAEPSRFIS APTKTPDKMG FDEVFMINLR ENSBTAP00000016841/1-623 TLQDEAESFM HVQLEVMVKH PPSEPSRFIS VPTKTPDKMG FDEVFMINLK 351 400 ENSTTRP00000002344/1-625 RRQDRRERML RALQEQEIEC RLVEAVDGKA MNTSQVEALG IQMLPGYRDP bmy_02601T0/1-614 RRQDRRERML RALQEQEIEC RLVEAVDGKA MNTSQVEALG IQMLPGYQDP ENSP00000252599/1-622 RRQDRRERML RALQAQEIEC RLVEAVDGKA MNTSQVEALG IQMLPGYRDP ENSBTAP00000016841/1-623 RRQDRRERML RALEEQEIAC RLVEAVDGKA MNTSQVEALG IQMLPGYRDP 401 450 ENSTTRP00000002344/1-625 YHGRPLTKGE LGCFLSHYNI WKEXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02601T0/1-614 YHGRPLTKGE LGCFLSHYNI WKEVVDRRLQ KSLVFEDDLR FEIFFKRRLM ENSP00000252599/1-622 YHGRPLTKGE LGCFLSHYNI WKEVVDRGLQ KSLVFEDDLR FEIFFKRRLM ENSBTAP00000016841/1-623 YHGRPLTKGE LGCFLSHYNI WKEVVDRGLQ KSLVFEDDLR FEIFFKRRLM 451 500 ENSTTRP00000002344/1-625 XXXXXXXXXX XXXXXXYVGR KRMQVEHPEK AVPRVRNLVE ADYSYWTLAY bmy_02601T0/1-614 NLMQDVEREG LDWDLIYVGR KRMQVEHPEK AVPRVRNLVE ADYSYWTLAY ENSP00000252599/1-622 NLMRDVEREG LDWDLIYVGR KRMQVEHPEK AVPRVRNLVE ADYSYWTLAY ENSBTAP00000016841/1-623 NLMQDVEREG LDWDLIYVGR KRMQVEHPEK AVPRVRNLVE ADYSYWTLAY 501 550 ENSTTRP00000002344/1-625 VISLQGARKL LAARPLSKML PVDEFLPVMF DKHPVSEYKA HFSPRDLRAF bmy_02601T0/1-614 VVSLPGARKL LAARPLSKML PVDEFLPVMF DKHPVSEYKA HFSPRDLRAF ENSP00000252599/1-622 VISLQGARKL LAAEPLSKML PVDEFLPVMF DKHPVSEYKA HFSLRNLHAF ENSBTAP00000016841/1-623 VISLQGARKL LAARPLSKML PVDEFLPVMF DKHPVSEYKA HFSPRDLRAF 551 600 ENSTTRP00000002344/1-625 SVEPLLVYPT HYTGDDGYVS DTETSVVWNN EHVKTDWDRA KSQKMREQQA bmy_02601T0/1-614 SVEPLLVYPT HYTGDDGYVS DTETSVVWNN EHVKTDWDRA KSQKMREQQV ENSP00000252599/1-622 SVEPLLIYPT HYTGDDGYVS DTETSVVWNN EHVKTDWDRA KSQKMREQQA ENSBTAP00000016841/1-623 SVEPLLIYPT HYTGDDGYVS DTETSVVWNN EHVKTDWDRA KSQKMREQQA 601 650 ENSTTRP00000002344/1-625 LSREAKNSDV LQSPLDSAAR DELEL bmy_02601T0/1-614 LSREAKNSDV LQSPLDSAAR DEL-- ENSP00000252599/1-622 LSREAKNSDV LQSPLDSAAR DEL-- ENSBTAP00000016841/1-623 LSREAKNSDV LQSPLDSAAR DEL--