KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:50 2014 Check: 00 .. Name: bmy_20830T0/1-244 Len: 481 Check: 7566 Weight: 1.00 Name: ENSP00000454783/1-480 Len: 481 Check: 3247 Weight: 1.00 Name: ENSBTAP00000016845/1-443 Len: 481 Check: 732 Weight: 1.00 Name: ENSTTRP00000015195/1-431 Len: 481 Check: 6784 Weight: 1.00 // 1 50 bmy_20830T0/1-244 ---------- ---------- ---------- ---------- ---------- ENSP00000454783/1-480 MTVTKMSWRP QYRSSKFRNV YGKVANREHC FDGIPITKNV HDNHFCAVNT ENSBTAP00000016845/1-443 LGLLQMSWRP QYRSSKFRNV YGKVANREHC FDGIPITKNV HDNHFCAVNA ENSTTRP00000015195/1-431 -----MSWRP QYRSSKFRNV YGKVANREHC FDGIPITKNV HDNHFCAVNA 51 100 bmy_20830T0/1-244 ---------- ---------- ---------- ---------- ---------- ENSP00000454783/1-480 RFLAIVTESA GGGSFLVIPL EQTGRIEPNY PKVCGHQGNV LDIKWNPFID ENSBTAP00000016845/1-443 RFLAIVTESA GGGSFLVIPL EQTGRIEPNY PKVCGHQGNV LDIKWNPFID ENSTTRP00000015195/1-431 RFLAIVTESA GGGSFLVIPL EQTGRIEPNY PKVCGHQGNV LDIKWNPFID 101 150 bmy_20830T0/1-244 ---------- ---------- -----MTEAL LELHGHSRRV GLVEWHPTTN ENSP00000454783/1-480 NIIASCSEDT SVRIWEIPEG GLKRNMTEAL LELHGHSRRV GLVEWHPTTN ENSBTAP00000016845/1-443 NIIASCSEDT SVRIWEIPEG GLKRNMTEAL LELHGHSRRV GLVEWHPTTN ENSTTRP00000015195/1-431 NIIASCSEDT SVRIWEIPEG GLKRNMTEAL LELHGHSRRV GLVEWHPTTN 151 200 bmy_20830T0/1-244 NILFSAGYDY KVLIWNLDVG EPVKMIDCHS DVILCMSFNT DGSLLTTTCK ENSP00000454783/1-480 NILFSAGYDY KVLIWNLDVG EPVKMIDCHT DVILCMSFNT DGSLLTTTCK ENSBTAP00000016845/1-443 NILFSAGYDY KVLIWNLDVG EPVKMIDCHS DVILCMSFNT DGSLLTTTCK ENSTTRP00000015195/1-431 NILFSAGYDY KVLIWNLDVG EPVKMIDCHS DVILCMSFNT DGSLLTTTCK 201 250 bmy_20830T0/1-244 DKKLRVIEPR SGRVLQEANC KNHRVNRVVF LGNMKRLLTT GVSRWNTRQI ENSP00000454783/1-480 DKKLRVIEPR SGRVLQEANC KNHRVNRVVF LGNMKRLLTT GVSRWNTRQI ENSBTAP00000016845/1-443 DKKLRVIEPR SGRVLQEANC KNHRVNRVVF LGNMKRLLTT GVSRWNTRQI ENSTTRP00000015195/1-431 DKKLRVIEPR SGRVLQEANC KNHRVNRVVF LGNMKRLLTT GVSRWNTRQI 251 300 bmy_20830T0/1-244 ALWDQEDLSM PLIEEEIDGL SGLLFPFYDA DTHMLYLAGK VGEGG----- ENSP00000454783/1-480 ALWDQEDLSM PLIEEEIDGL SGLLFPFYDA DTHMLYLAGK -GDGNIRYYE ENSBTAP00000016845/1-443 ALWDQEDLSM PLIEEEIDGL SGLLFPFYDA DTHMLYLAGK -GDGNIRYYE ENSTTRP00000015195/1-431 ALWDQEDLSM PLIEEEIDGL SGLLFPFYDA DTHMLYLAGK -GDGNIRYYE 301 350 bmy_20830T0/1-244 ---------- ---------- GGTG------ ---TACG--- ---------- ENSP00000454783/1-480 ISTEKPYLSY LMEFRSPAPQ KGLGVMPKHG LDVSACEVFR FYKLVTLKGL ENSBTAP00000016845/1-443 ISTEKPYLSY LMEFRSPAPQ KGLGVMPKHG LDVSACEVFR FYKLVTLKGL ENSTTRP00000015195/1-431 ISTEKPYLSY LMEFRSPAPQ KGLGVMPKHG LDVSACEVFR FYKLVTLKGL 351 400 bmy_20830T0/1-244 -RPPPPLGPR SCPTSQE--- ------EPNL S--------- --ALPLTQHG ENSP00000454783/1-480 IEPISMIVPR RSDSYQEDIY PMTPGTEPAL TPDEWLGGIN RDPVLMSLKE ENSBTAP00000016845/1-443 IEPISMIVPR RSDSYQEDIY PMTPGTEPAL TPDEWLGGIN RDPVLMSLKE ENSTTRP00000015195/1-431 IEPISMIVPR RSDSYQEDIY PMTPGTEPAL TPDEWLGGIN RDPVLMSLKE 401 450 bmy_20830T0/1-244 SYPSPSKPTL KSDTHSAE-V SVTENSFRGG LEWGFTWE-- ---------- ENSP00000454783/1-480 GYKKSSKMVF KAPIKEKKSV VVNGIDLLEN VPPRTENELL RMFFRQQDEI ENSBTAP00000016845/1-443 GYKKSPKMVF KAPIKEKKSV VVNGIDLLEN VPPRTENEVR KISY------ ENSTTRP00000015195/1-431 GYKKSPKMVF KAPIKEKKSV VVNGIDLLEN VPP-TENE-- ---------- 451 500 bmy_20830T0/1-244 ---------- ---------- ---------- - ENSP00000454783/1-480 RRLKEELAQK DIRIRQLQLE LKNLRNSPKN C ENSBTAP00000016845/1-443 ---------- ---------- ---------- - ENSTTRP00000015195/1-431 ---------- ---------- ---------- -