KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:51 2014 Check: 00 .. Name: ENSP00000345808/1-846 Len: 907 Check: 3839 Weight: 1.00 Name: ENSBTAP00000016846/1-793 Len: 907 Check: 2006 Weight: 1.00 Name: ENSTTRP00000000503/1-846 Len: 907 Check: 4209 Weight: 1.00 Name: BACU017198/1-482 Len: 907 Check: 4335 Weight: 1.00 Name: bmy_15753T0/1-626 Len: 907 Check: 5958 Weight: 1.00 // 1 50 ENSP00000345808/1-846 MKMADRSGKI IPGQVYIEVE YDYEYEAKDR KIVIKQGERY ILVKKTNDDW ENSBTAP00000016846/1-793 --MADRGGKA LPGPVYIEVE YDYEYEAKDR KIVIKQGERY LLVKKTNDDW ENSTTRP00000000503/1-846 MKMADRGGKI VPGQVYIEVE YDYEYEAKDR KVVIKQGERY ILVKKTNDDW BACU017198/1-482 ---------- ---------- ---------- ---------- ---------- bmy_15753T0/1-626 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000345808/1-846 WQVKPDENSK AFYVPAQYVK EVTRKALMPP VKQVAGLPNN STKIMQSLHL ENSBTAP00000016846/1-793 WQVKPDESSK AFYVPAQYVK EVGRRALMPP VKPAAGLPNH SVKTAQSLHL ENSTTRP00000000503/1-846 WQVKLDENSK AFYVPAQYVR EVGRRALMPP VKQAAGLPNH SVKTMQSLHL BACU017198/1-482 ---------- ---------- ---------- ---------- ---------- bmy_15753T0/1-626 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000345808/1-846 QRSTENVNKL PELSSFGK-P SSSVQGTGLI RDANQNFGPS YNQGQTVNLS ENSBTAP00000016846/1-793 QRSSENVNRL PELSSFGKTS SSSVQGTGLV RDANQNFGPT YIPGQTINLS ENSTTRP00000000503/1-846 QRSTENVSKL PELSSFGK-P SPSVQGTGLT RDANQNFGPS YIPGQTVNLS BACU017198/1-482 ---------- ---------- ---------- ---------- ---------- bmy_15753T0/1-626 ---------- MDISHFSQ-- ---------- ---------- ---------- 151 200 ENSP00000345808/1-846 LDLTHNNGKF NNDSHSPKVS SQNRTRSFGH FPGPEFLDVE KTSFSQEQSC ENSBTAP00000016846/1-793 LDLTHNNGKL NSDSHSPKVP GQNRTRLFGH FPGPEFLEVE KPGFPQEQSC ENSTTRP00000000503/1-846 LDLTHNNGKF NSDSHSPKVS GQNRTRLFGH FPGPEFLDVE KAGFSQEQSC BACU017198/1-482 ---------- ---------- ---------- ---------- ---------- bmy_15753T0/1-626 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000345808/1-846 DSAGEGSERI HQDSESGDEL SSSSTEQIRA TTPPNQGRPD SPVYANLQEL ENSBTAP00000016846/1-793 DSVGEGSERI QQDSESGDEL SSSSTEQIRA TTPPNQGRPD SPVYANLQEL ENSTTRP00000000503/1-846 DSAGEGSERI HHDSESGDEL SSSSTEQIRA TTPPHQGRPD SPVYANLQEL BACU017198/1-482 ---------- ---------- ---------- ---------- ---------- bmy_15753T0/1-626 ---------- ---------- ---------A TPPPNQGRPD SPVYANLQEL 251 300 ENSP00000345808/1-846 KISQSALPPL PGSPAIQING EWETHKDSSG RCYYYNRGTQ ERTWKPPRWT ENSBTAP00000016846/1-793 KISQSALPPL PGSPAIQING EWETHKDSSG RCYYYNRGTQ ERTWKPPRWT ENSTTRP00000000503/1-846 KISQSALPPI PGSPAIQING EWETHKDSSG RCYYYNRGTQ ERTWKPPRWT BACU017198/1-482 ---------- ---------- ---------- ---------- ---------- bmy_15753T0/1-626 KISQSALPPI PGSPAVQING EWETHKDSSG RCYYYNRGTQ ERTWKPPRWT 301 350 ENSP00000345808/1-846 RDASISKGDF QNPGDQELLS SEENYYSTSY SQSDSQCGSP PRGWSEELDE ENSBTAP00000016846/1-793 RDTNTSKGDS QSPGDQE--- ---------- ---------- ---------- ENSTTRP00000000503/1-846 RDTNISKGDS QSPGDQELLS SEENYHSVCY SQSDSQCGSP PRGWSEELDA BACU017198/1-482 ---------- ---------- -------MCY SQSDSQYGSP PRGWSEELDE bmy_15753T0/1-626 RDTNISKGDS QSPGDQELLS SEENYHSICY SQSDSQCGSP PRGWSEELDE 351 400 ENSP00000345808/1-846 RGHTLYTSDY TNEKWLKHVD DQGRQYYYSA DGSRSEWEL- ---------- ENSBTAP00000016846/1-793 ---------- ----WLKHVD DQGRQYYYSA DGSRSEWEL- ---------- ENSTTRP00000000503/1-846 RGHTLYTSDC TNEKWLKHVD DQGRQYYYSA DGSRSEWEL- ---------- BACU017198/1-482 RGHTLYTSDC TNEKWLKHVD DQGRQYYYSA DGSRSEWELP KLMKLSLVEM bmy_15753T0/1-626 RGHTLYTSDC TNEKWLKHVD DQGRQYYYSA DGSRSEWEL- ---------- 401 450 ENSP00000345808/1-846 ---------- ---------- ---------- ---------- ---------P ENSBTAP00000016846/1-793 ---------- ---------- ---------- ---------- ---------P ENSTTRP00000000503/1-846 ---------- ---------- ---------- ---------- ---------P BACU017198/1-482 KCFAEDNINL VSPAPKSLIF LIVSQCWSKM RKLSIMPHLS SKDWSEWELP bmy_15753T0/1-626 ---------- ---------- ---------- ---------- ---------P 451 500 ENSP00000345808/1-846 KYNASSQQQR EIIKSRSLDR RLQEPIVLTK WRHSTIVLDT NDKESPTASK ENSBTAP00000016846/1-793 KYNASSQQQR EIIKSRSLDR RLQEPIVLSK WRHSTIVLDA NDKESPSASK ENSTTRP00000000503/1-846 KYNASSQQQR EIIKSRSLDR RLQEPIVLTK WRHSTIVLDA NDKESPTASK BACU017198/1-482 KYNASSQQQR EIIKSRSLDR RLQEPIVLTK WRHSAIVLDT NDK------- bmy_15753T0/1-626 KYNASSQQQR EIIKSRSLDR RLQEPVVLTK WRHSAIVLDT NDKESPTASK 501 550 ENSP00000345808/1-846 PCFPENESSP SSPKHQDTAS SPKDQEKYGL LNVTKIAENG KKVRKNWLSS ENSBTAP00000016846/1-793 PCYPEHESSP SSPKHQDT-- ---GQEKYGL LNVTKITENG KKVRKNWLSS ENSTTRP00000000503/1-846 PCYPENESSP SSPKNQDTAS SPKGQEKYGL LNVTKITENG KKVRKNWLSS BACU017198/1-482 ---------- --------AS SPKGQEKYGL LNVTKITENG KKVRKNWLSS bmy_15753T0/1-626 PCYPENESSP SSPKNQDTAS SPKGQEKYGL LNVTKITENG KKVRKNWLSS 551 600 ENSP00000345808/1-846 WAVLQGSSLL FTKTQGSSTS WFGSNQSKPE FTVDLKGATI EMASKDKSSK ENSBTAP00000016846/1-793 WAVLQGSSLL FTKTQGSSTS WFGSNQSKPE FTVDLKGATI EMASKDKSSK ENSTTRP00000000503/1-846 WAVLQGSSLL FTKTQGSSTS WFGSNQSKPE FTVDLKGATI EMASKDKSSK BACU017198/1-482 WAVLQGSSLL FTKTQGSSTS W--------- ---------- ---------- bmy_15753T0/1-626 WAVLQGSSLL FTKTQGSSTS WFGSNQSKPE FTVDLKGATI EMASKDKSSK 601 650 ENSP00000345808/1-846 KNVFELKTRQ GTELLIQSDN DTVINDWFKV LSSTINNQAV ETDEGIEEEI ENSBTAP00000016846/1-793 KNVFELKTRQ GTELLIQSDN DTVINDWFKV LSSTISNQTV EPDEAIEEEI ENSTTRP00000000503/1-846 KNVFELKTRQ GTELLIQSDN DAVINEWFKV LSSTISNQTV EPDEAIEEDV BACU017198/1-482 -----LKTRQ GTELLIQSDN DAVINEWFKV LSSTVSNQTV EPDEAIEEDI bmy_15753T0/1-626 KNVFELKTRQ GTELLIQSDN DAVINEWFKV LSSTISNQTV EPDEAIEEDI 651 700 ENSP00000345808/1-846 PDSPGIEKHD KEKEQKDPKK LRSFKVSSID SSEQKKTKKN LKKFLTRRPT ENSBTAP00000016846/1-793 PDSPGIEKHD KEKDQKEPKK LRSAKVSSID SSEQKKTKKN LKKFLTRRPT ENSTTRP00000000503/1-846 PDSPGIEKHD KEKDHKDLKK SRSTKVSSID SSEQKKTKKN LKKFLTRRPT BACU017198/1-482 PDSPGIEKHD KEKDHKDLKK LRY------- ---------- ---------- bmy_15753T0/1-626 PDSPGIEKHD KEKDHKDLKK LRSTKVSSID SSEQKKTKKN LKKFLTRRPT 701 750 ENSP00000345808/1-846 LQAVREKGYI KDQVFGSNLA NLCQRENGTV PKFVKLCIEH VEEHGLDIDG ENSBTAP00000016846/1-793 LQAVREKGYI KDQVFGANLS NLCQRENSTV PKFVKLCIEH VEQYGLDVDG ENSTTRP00000000503/1-846 LQAVREKGYI KDQVFGANLA NLCQRENGTV PKFVKLCIEH VEQYGLDVDG BACU017198/1-482 ---------- --QVFGANLA NLCQRENGTV PKFVKLCIEH VEQYGLDVDG bmy_15753T0/1-626 LQAVREKGYI KDQVFGANLA NLCQRENGTV PKFVKLCIEH VEQYGLDVDG 751 800 ENSP00000345808/1-846 IYRVSGNLAV IQKLRFAVNH DEKLDLNDSK WEDIHVITGA LKMFFRELPE ENSBTAP00000016846/1-793 IYRVSGNLAV IQKLRFAVNH DEKLDLKDSK WEDIHVITGA LKMFFRELPE ENSTTRP00000000503/1-846 IYRVSGNLAV IQKLRFTVNH DEKLDLKDSK WEDIHVITGA LKMFFRELPE BACU017198/1-482 IYRVSGNLAV IQKLRFTVNH DEKLDLKDSK WEDIHVITGA LKMFFRELPE bmy_15753T0/1-626 IYRVSGNLAV IQKLRFTVNH DEKLDLKDSK WEDIHVITGA LKMFFRELPE 801 850 ENSP00000345808/1-846 PLFTFNHFND FVNAIKQEPR QRVAAVKDLI RQLPKPNQDT MQILFRHLRR ENSBTAP00000016846/1-793 PLFTFNHFND FVNAIKQEPR QRVSAVKDLI KQLPKPNQDT MQILFRHLKR ENSTTRP00000000503/1-846 PLFTFNHFND FVNAIKQEPR QRVSAVKDLI KQLPKPNQDT MQTLFRHLKR BACU017198/1-482 PLFTFNHFND FVNAIKQEPR QRVSAVKDLI KQLPKPNQDT MQTLFRHLKR bmy_15753T0/1-626 PLFTFNHFND FVNAIKQEPR QRVSAVKDLI KQLPKPNQDT MQTLFRHLKR 851 900 ENSP00000345808/1-846 VIENGEKNRM TYQSIAIVFG PTLLKPEKET GNIAVHTVYQ NQIVELILLE ENSBTAP00000016846/1-793 VIENGEKNRM TYQSIAIVFG PTLLKPEKET GNIAVHTVYQ NQIVELILLE ENSTTRP00000000503/1-846 VIENGEKNRM TYQSIAIVFG PTLLKPEKET GNIAVHTVYQ NQIVELILLE BACU017198/1-482 VIENGEKNRM TYQSIAIVFG PTLLKPEKET GNIAVHTVYQ NQIVELILLE bmy_15753T0/1-626 VIENGEKNRM TYQSIAIVFG PTLLKPEKET GNIAVHTVYQ NQIVELILLE 901 950 ENSP00000345808/1-846 LSSIFGR ENSBTAP00000016846/1-793 INSIFGR ENSTTRP00000000503/1-846 VNSIFGR BACU017198/1-482 INSIFGR bmy_15753T0/1-626 INSIFGR