KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:53 2014 Check: 00 .. Name: bmy_07731T0/1-168 Len: 312 Check: 9282 Weight: 1.00 Name: ENSP00000348168/1-291 Len: 312 Check: 2767 Weight: 1.00 Name: ENSBTAP00000016863/1-289 Len: 312 Check: 9081 Weight: 1.00 Name: ENSTTRP00000011820/1-226 Len: 312 Check: 4999 Weight: 1.00 Name: BACU005218/1-312 Len: 312 Check: 1313 Weight: 1.00 // 1 50 bmy_07731T0/1-168 ---------- ---------- ---------- ---------- ---------- ENSP00000348168/1-291 ---------- ---------- -MDPSLLRER ELFKKRALST PVVEKRSASS ENSBTAP00000016863/1-289 ---------- ---------- -MDPSLLRER ELFKKRALST PVVEKRSVSS ENSTTRP00000011820/1-226 ---------- ---------- ---------- ---------- ---------- BACU005218/1-312 MEPTSENFIH NASFEHVFEG IMDPSLLRER ELFKKRALST PVVEKRSVSS 51 100 bmy_07731T0/1-168 ---------- ---------- --MDIDSKSN GSFNSKVLSG RSGYKFGVLA ENSP00000348168/1-291 ESSSSSSKKK KTKVEHGGSS GSKQNSDHSN GSFNLKALSG SSGYKFGVLA ENSBTAP00000016863/1-289 E--ASSSKKK KAKLEHGGSS GSKQNSDHSN GSFNLKALSG SSGYKFGVLA ENSTTRP00000011820/1-226 ---------- ---------- -------HNN GSFNLKALSG SSGYKFGVLA BACU005218/1-312 ESSSSSSKKK KAKLEHGGSS GSKQNSDHSN GSFNLKALSG SSGYKFGVLA 101 150 bmy_07731T0/1-168 KIVNYMKTWH QQRDTHPLTL EEILDETQHL DIGLKQKQRL MTEAIVSNPK ENSP00000348168/1-291 KIVNYMKTRH QRGDTHPLTL DEILDETQHL DIGLKQKQWL MTEALVNNPK ENSBTAP00000016863/1-289 KIVNYMKTRH QRGDTHPLTL EEILDETQHL DIGLKQKQWL MSEALVNNPK ENSTTRP00000011820/1-226 KIVNYMKTRH QRGDTHPLTL EEILDETQHL DIGLKQKQWL MTE------- BACU005218/1-312 KIVNYMKTRH QRGDTHPLTL EEILDETQHL DIGLKQKQWL MTEALVNNPK 151 200 bmy_07731T0/1-168 TEVTDRKYAF KPKYNLKDKK VLLRLLNKHD QRGLGGVLLE DIEEGLPNSQ ENSP00000348168/1-291 IEVIDGKYAF KPKYNVRDKK ALLRLLDQHD QRGLGGILLE DIEEALPNSQ ENSBTAP00000016863/1-289 IEVVDGKYAF KPKYNLKDKK ALLRLLDQHD QRGLGGILLE DIEEGLPNSQ ENSTTRP00000011820/1-226 IEVIDGKYAF KPKYNLKD-K ALLRLLDKHD QRGL-GILLE DIEEGLPNSQ BACU005218/1-312 IEVVDGKYAF KPKYNLKDKK ALLRLLDKHD QRGLGGILLE DIEEGLPNSQ 201 250 bmy_07731T0/1-168 KAVKALGDQI PFVNLPDKKK ILFFNDKSCQ FSVDEKFQKL ---------- ENSP00000348168/1-291 KAVKALGDQI LFVNRPDKKK ILFFNDKSCQ FSVDEEFQKL WRSVTVDSMD ENSBTAP00000016863/1-289 KAVKALGDQI LFVNRPDKKK ILFFNDKSCQ FSVDEEFQKL WRSVTVDSMD ENSTTRP00000011820/1-226 KAVKALGDQI LFVNRPDKKK ILFFNDKSCQ FSVDEEFQKL WRSVTVDSMD BACU005218/1-312 KAVKALGDQI LFVNRPDKKK ILFFNDKSCQ FSVDEEFQKL WRSVTVDSMD 251 300 bmy_07731T0/1-168 ---------- ---------- ---------- ---------- ---------- ENSP00000348168/1-291 EEKIEEYLKR QGISSMQESG PKKVAPIQRR KKPASQKKRR FKTHNEHLAG ENSBTAP00000016863/1-289 EEKIEEYLKR QGISSMQDSG PKKVAPIQRR KKPASQKKRR FKTHNEHLAG ENSTTRP00000011820/1-226 EEKIEEYLKR QGISSMQESG PKKVAPIQRR KKPASQKKRR FKTHNEHLAG BACU005218/1-312 EEKIEEYLKR QGISSMQESG PKKVAPIQRR KKPASQKKRR FKTHNEHLAG 301 350 bmy_07731T0/1-168 ---------- -- ENSP00000348168/1-291 VLKDYSDITS SK ENSBTAP00000016863/1-289 VLKDYSDIAP GK ENSTTRP00000011820/1-226 VLKDYSDITP GK BACU005218/1-312 VLKDYSDITP GK