KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:59:53 2014  Check: 00 ..

 Name: ENSP00000444978/1-225     Len:    225  Check:  8282  Weight:  1.00
 Name: ENSBTAP00000016865/1-209  Len:    225  Check:  5231  Weight:  1.00
 Name: ENSTTRP00000009169/1-224  Len:    225  Check:  3755  Weight:  1.00
 Name: bmy_11914T0/1-225         Len:    225  Check:  7569  Weight:  1.00

//


                          1                                                   50
ENSP00000444978/1-225     MSCESSMVLG YWDIRGLAHA IRLLLEFTDT SYEEKRYTCG EAPDYDRSQW 
ENSBTAP00000016865/1-209  ---------- ------LAHA IRMLLEFTDT SYEEKRYTCG EAPDYDKSQW 
ENSTTRP00000009169/1-224  MSSKSTMILG YWDIRGLAHA IRMLLEFTET AYEEKRYTCG EAPDYDKSQW 
bmy_11914T0/1-225         MSSKSTMILG YWDIRGLAHA IRMLLEFTDT AYEEKRYTCG EAPDYDKSQW 


                          51                                                 100
ENSP00000444978/1-225     LDVKFKLDLD FPNLPYLLDG KNKITQSNAI LRYIARKHNM CGETEEEKIR 
ENSBTAP00000016865/1-209  LDVKFKLDLD FPNLPYLMDG KNRLTQSNAI LRYIARKHNM CGDTEEERIR 
ENSTTRP00000009169/1-224  LDMKFKLDLD FPNLPYLMDG KNKITQSNAI LRYIARKHNM CGETEEEKIR 
bmy_11914T0/1-225         LDMKFKLDLD FPNLPYLMDG KNKITQSNAI LRYIARKHNM CGETEEEKIR 


                          101                                                150
ENSP00000444978/1-225     VDIIENQVMD FRTQLIRLCY SSDHEKLKPQ YLEELPGQLK QFSMFLGKFS 
ENSBTAP00000016865/1-209  VDIMENQIMD FRMQLVQLCY NPDHEKLKPR YLEQLPGQLK QFSLFLGKYS 
ENSTTRP00000009169/1-224  VDMMENQIMD FRMQLIQLCY NADHEKLKPQ YLEQLPGQLK QFSLFLGKYS 
bmy_11914T0/1-225         VDMMENQIMD FRMQLIQLCY NPDHEKLKPR YLEQLPGQLK QFSLFLGKYS 


                          151                                                200
ENSP00000444978/1-225     WFAGEKLTFV DFLTYDILDQ NRIFDPKCLD EFPNLKAFMC RFEALEKIAA 
ENSBTAP00000016865/1-209  WFAGEKLTFV DFLTYDVLDQ NRMFEPKCLD EFPNLKAFMC RFEALEKIAT 
ENSTTRP00000009169/1-224  WFAGEKLTFV DFLTYDVLDQ NHIFEPTCLD EFPNL-AFMR RFEALEKIAA 
bmy_11914T0/1-225         WFAGEKLTFV DFLTYDVLDQ NHIFEPKCLD EFPNLKAFMC RFEALEKIAA 


                          201                                                250
ENSP00000444978/1-225     YLQSDQFCKM PINNKMAQWG NKPVC 
ENSBTAP00000016865/1-209  YMQSDRFLKM PVNNKMAQWG NRRIC 
ENSTTRP00000009169/1-224  YMQSDRFLKM PINNKMAQWG NKRIC 
bmy_11914T0/1-225         YMQSDRFLKM PINNKMAQWG NKRIC