KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:54 2014 Check: 00 .. Name: bmy_15505T0/1-500 Len: 551 Check: 3702 Weight: 1.00 Name: ENSP00000362649/1-482 Len: 551 Check: 9602 Weight: 1.00 Name: BACU003305/1-518 Len: 551 Check: 7076 Weight: 1.00 Name: ENSTTRP00000001520/1-428 Len: 551 Check: 6467 Weight: 1.00 Name: ENSBTAP00000016877/1-482 Len: 551 Check: 9529 Weight: 1.00 // 1 50 bmy_15505T0/1-500 MESDDQFYKY QEVKVKVSVE RTSYKSNKWQ RNRRFLWKSD IGNYYYGQGH ENSP00000362649/1-482 ---------- ---------- --MAQTQGTR RKVCYYYDGD VGNYYYGQGH BACU003305/1-518 ---------- ---------- ---------M MEIPEKRPGD VGNYYYGQGH ENSTTRP00000001520/1-428 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016877/1-482 ---------- ---------- --MAQTQGTK RKVCYYYDGD VGNYYYGQGH 51 100 bmy_15505T0/1-500 PMKPHRIRMT HNLLLNYGLX RKMEIYRPHK ATAEEMTKYH SDEYIKFLRS ENSP00000362649/1-482 PMKPHRIRMT HNLLLNYGLY RKMEIYRPHK ANAEEMTKYH SDDYIKFLRS BACU003305/1-518 PMKPHRIRMT HNLLLNYGLY RKMEIYRPHK ANAEEMTKYH SDDYIKFLRS ENSTTRP00000001520/1-428 ---------- ---------- ------RPHK ANAEEMTKYH SDDYIKFLRS ENSBTAP00000016877/1-482 PMKPHRIRMT HNLLLNYGLY RKMEIYRPHK ANAEEMTKYH SDDYIKFLRS 101 150 bmy_15505T0/1-500 IRPDNMSEYS KQMQR----- ---------- ---------- ---------- ENSP00000362649/1-482 IRPDNMSEYS KQMQR----- ---------- ---------- ---------- BACU003305/1-518 IRPDNMSEYS KQMQRCKKDI VKGKPSRVGV MRAYGRGPAP TRPQRMNWSL ENSTTRP00000001520/1-428 IRPDNMSEYS KQMQR----- ---------- ---------- ---------- ENSBTAP00000016877/1-482 IRPDNMSEYS KQMQR----- ---------- ---------- ---------- 151 200 bmy_15505T0/1-500 --------FN VGEDCPVFDG LFEFCQLSTG GSVAGAVKLN RQQTDMAVNW ENSP00000362649/1-482 --------FN VGEDCPVFDG LFEFCQLSTG GSVASAVKLN KQQTDIAVNW BACU003305/1-518 RDGAIGQEVN VGEDCPVFDG LFEFCQLSTG GSVASAVKLN KQQTDIAVNW ENSTTRP00000001520/1-428 --------FN VGEDCPVFDG LFEFCQLSTG GSVASAVKLN KQQTDIAVNW ENSBTAP00000016877/1-482 --------FN VGEDCPVFDG LFEFCQLSTG GSVASAVKLN KQQTDIAVNW 201 250 bmy_15505T0/1-500 AGGLHHAKKS EASGFCYVND IVLAILELLK YHQRVLYIDI DIHHGDGVEE ENSP00000362649/1-482 AGGLHHAKKS EASGFCYVND IVLAILELLK YHQRVLYIDI DIHHGDGVEE BACU003305/1-518 AGGLHHAKKS EASGFCYVND IVLAILELLK YHQRVLYIDI DIHHGDGVEE ENSTTRP00000001520/1-428 AGGLHHAKKS EASGFCYVND IVLAILELLK YHQRVLYIDI DIHHGDGVEE ENSBTAP00000016877/1-482 AGGLHHAKKS EASGFCYVND IVLAILELLK YHQRVLYIDI DIHHGDGVEE 251 300 bmy_15505T0/1-500 AFYTTDRVMT VSFHKYGEYF PGTGDLRDIG AGKGKYYAVN FPMRDGIDDE ENSP00000362649/1-482 AFYTTDRVMT VSFHKYGEYF PGTGDLRDIG AGKGKYYAVN YPLRDGIDDE BACU003305/1-518 AFYTTDRVMT VSFHKYGEYF PGTGDLRDIG AGKGKYYAVN YPLRDGIDDE ENSTTRP00000001520/1-428 AFYTTDRVMT VSFHKYGEYF PGTGDLRDIG AGKGKYYAVN YPLRDGIDDE ENSBTAP00000016877/1-482 AFYTTDRVMT VSFHKYGEYF PGTGDLRDIG AGKGKYYAVN YPLRDGIDDE 301 350 bmy_15505T0/1-500 SYGQIFKPII SKVMEMYQPS AVVLQCGADS LSGDRLGCFN LTVKGHAKCV ENSP00000362649/1-482 SYEAIFKPVM SKVMEMFQPS AVVLQCGSDS LSGDRLGCFN LTIKGHAKCV BACU003305/1-518 SYEAIFKPVM SKVMEMFQPS AVVLQCGSDS LSGDRLGCFN LTIKGHAKCV ENSTTRP00000001520/1-428 SYEAIFKPVM SKVMEMFQPS AVVLQCGSDS LSGDRLGCFN LTIKGHAKCV ENSBTAP00000016877/1-482 SYEAIFKPVM SKVMEMFQPS AVVLQCGSDS LSGDRLGCFN LTIKGHAKCV 351 400 bmy_15505T0/1-500 EVVKTFNLPL LMLGGGGYTI RNVARCWTYE TAVALDCEIP NELPYNDYFE ENSP00000362649/1-482 EFVKSFNLPM LMLGGGGYTI RNVARCWTYE TAVALDTEIP NELPYNDYFE BACU003305/1-518 EFVKSFNLPM LMLGGGGYTI RNVARCWTYE TAVALDTEIP NELPYNDYFE ENSTTRP00000001520/1-428 EFVKSFNLPM LMLGGGGYTI RNVARCWTYE TAVALDTEIP NELPYNDYFE ENSBTAP00000016877/1-482 EFVKSFNLPM LMLGGGGYTI RNVARCWTYE TAVALDTEIP NELPYNDYFE 401 450 bmy_15505T0/1-500 YFGPDFKLHI SPSNMTNQNT PEYMEKIKQR LFENLRMLPH APGVQMQAIP ENSP00000362649/1-482 YFGPDFKLHI SPSNMTNQNT NEYLEKIKQR LFENLRMLPH APGVQMQAIP BACU003305/1-518 YFGPDFKLHI SPSNMTNQNT NEYLEKIKQR LFENLRMLPH APGVQMQAIP ENSTTRP00000001520/1-428 YFGPDFKLHI SPSNMTNQNT NEYLEKIKQR LFENLRMLPH APGVQMQAIP ENSBTAP00000016877/1-482 YFGPDFKLHI SPSNMTNQNT NEYLEKIKQR LFENLRMLPH APGVQMQAIP 451 500 bmy_15505T0/1-500 EDAVHEDSGD EDGEDPDKRI SIRASDKRIA CDEEFSDSED EGEGGRRNVA ENSP00000362649/1-482 EDAIPEESGD EDEDDPDKRI SICSSDKRIA CEEEFSDSEE EGEGGRKNSS BACU003305/1-518 EDAVPEESGD EDEEDPDKRI SICSSDKRIA CEEEFSDSDE EGEGGRKNSS ENSTTRP00000001520/1-428 EDAIPEESGD EDEEDPDKRI SICSSDKRIA CEEEFSDSDE EGEGGRKNSS ENSBTAP00000016877/1-482 EDAIPEESGD EDEEDPDKRI SICSSDKRIA CEEEFSDSDE EGEGGRKNSS 501 550 bmy_15505T0/1-500 DHKKGAKKAR IEEDKKETED KKTDVKEEDK SKDNSGEKTD TKG------- ENSP00000362649/1-482 NFKK-AKRVK TEDEKEKDPE EKKEVTEEEK TKE---EKPE AKGVKEEVKL BACU003305/1-518 NFKK-AKRVK TEDEKEKDPE EKKEATEEEK TKE---EKQE AKGVKEEVKL ENSTTRP00000001520/1-428 NFKK-AKRVK TEDEKEKDPE EKKEVTEEEK TKE---EKQE AKGVKEEVKL ENSBTAP00000016877/1-482 NFKK-AKRVK TEDEKEKDPE EKKEVTEEEK TKE---EKQE AKGVKEEVKL 551 600 bmy_15505T0/1-500 - ENSP00000362649/1-482 A BACU003305/1-518 A ENSTTRP00000001520/1-428 A ENSBTAP00000016877/1-482 A