KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:54 2014 Check: 00 .. Name: bmy_11420T0/1-373 Len: 430 Check: 8632 Weight: 1.00 Name: ENSTTRP00000009379/1-377 Len: 430 Check: 4885 Weight: 1.00 Name: ENSBTAP00000016882/1-377 Len: 430 Check: 6773 Weight: 1.00 Name: BACU019635/1-377 Len: 430 Check: 6527 Weight: 1.00 // 1 50 bmy_11420T0/1-373 MRGQRSLLLG PARLCLRLLL LLGYRRRCPP LLRGLVQRWR YGKVCLRSLL ENSTTRP00000009379/1-377 MRGQRSLLLG PARLCLRLLL LLGYRRRCPP LLRGLVQRWR YGKVCLRSLL ENSBTAP00000016882/1-377 MRGQWSLLLG PARLCLRLLL LLGYRRRCPP LLRGLVQRWR YGKVCLRSLL BACU019635/1-377 MRAQQSLLLG PARLCLRLLL LLGYRRRCPP LLRGLVQRWR YGKVCLRSLL 51 100 bmy_11420T0/1-373 YNSFGGSDTA VDAAFEPIYW LVDNVIRWCG VVFVVLVIVL TSSIVAIAYL ENSTTRP00000009379/1-377 HNSFAGSDTA VDAAFEPIYW LVDNVIRWCG VVFVVLVIVL TSSIVAIAYL ENSBTAP00000016882/1-377 YNSFGGSDTA VDAAFEPIYW LVDNVIRWCG VVFVVLVIVL TSSIVAIAYL BACU019635/1-377 YNSFGGSDAA VDAAFEPIYW LVDNVIRWCG VVFVVLVIVL TSSIVAIAYL 101 150 bmy_11420T0/1-373 CVLPLILQTY SVPRLCWHFF YSHWNLILIV FHYYQAITTP PGYPPPVGPP ENSTTRP00000009379/1-377 CILPLILQTY SVPRLCWHFF YSHWNLILIV FHYYQAITTP PGYPRP---- ENSBTAP00000016882/1-377 CVLPLILQTY SVPRLCWHFF YSHWNLILIV FHYYQAITTP PGYPPQ---- BACU019635/1-377 CVLPLILQTY SVPRLCWHFF YSHWNLILIV FHYYQAITTP PGYPPP---- 151 200 bmy_11420T0/1-373 SGAWGRERTA AYWSQSQECG GRVPWYFGGT KPVLPQLSWC FSPSAQGRND ENSTTRP00000009379/1-377 ---------- ---------- ---------- ---------- ------GRND ENSBTAP00000016882/1-377 ---------- ---------- ---------- ---------- ------GRND BACU019635/1-377 ---------- ---------- ---------- ---------- ------GRND 201 250 bmy_11420T0/1-373 ITTVSICKKC INPKPARTHH CSICN----- ---------- ---------- ENSTTRP00000009379/1-377 ITTVSICKKC INPKPARTHH CSICNRCVLK MDHHCPWLNN CVGHYNHRYF ENSBTAP00000016882/1-377 MTTVSICKKC INPKPARTHH CSICNRCVLK MDHHCPWLNN CVGHYNHRYF BACU019635/1-377 ITTVSICKKC INPKPARTHH CSICNRCVLK MDHHCPWLNN CVGHYNHRYF 251 300 bmy_11420T0/1-373 ---------- ----SYGSWD LFREAYAAIE KMKQLDKNKL QAVANQTYHQ ENSTTRP00000009379/1-377 FSFCFFMTLG CVYCSYGSWD LFREAYAAIE KMKQLDKNKL QAVANQTYHQ ENSBTAP00000016882/1-377 FSFCFFMTLG CVYCSYGSWD LFREAYAAIE KMKQLDKNKL QAVANQTYHQ BACU019635/1-377 FSFCFFMTLG CVYCSYGSWD LFREAYAAIE KMKQLDKNKL QAVANQTYHQ 301 350 bmy_11420T0/1-373 TPPPTFSFRE RVTHKSLVYL WFLCSSVALA LGALTVWHAV LISRGETSIE ENSTTRP00000009379/1-377 TPPPTFSFRE RVTHKSLVYL WFLCSSVALA LGALTVWHAV LISRGETSIE ENSBTAP00000016882/1-377 TPPPTFSFRE RVTHKSLVYL WFLCSSVALA LGALTIWHAV LISRGETSIE BACU019635/1-377 TPPPTFSFRE RVTHKSLVYL WFLCSSVALA LGALTVWHAV LISRGETSIE 351 400 bmy_11420T0/1-373 RHINKKERRR LQAKGRALAD SGVVTFQSPA PWE------- -RNELGSPSL ENSTTRP00000009379/1-377 RHINKKERRR LQAKGRVFRN H--YNYGCLD NWKVFLGVDT GRHWLTRVLL ENSBTAP00000016882/1-377 RHINKKERQR LQAKGRVFRN H--YNYGCLD NWKVFLGVDT GRHWLTRVLL BACU019635/1-377 RHINKKERRR LQAKGRVFRN H--YNYGCLD NWKVFLGVDT GRHWLTRVLL 401 450 bmy_11420T0/1-373 GDCSLSLCDG SVSWS----V SATT------ ENSTTRP00000009379/1-377 PSSHLPHGNG -MSWDPPPWV TAHSASVMAV ENSBTAP00000016882/1-377 PSSHLPHGNG -MSWDPPPWV TAHSASVMAV BACU019635/1-377 PSSHLPHGNG -LSWDPPPWV TAHSASVMAV