KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:59 2014 Check: 00 .. Name: ENSP00000306163/1-360 Len: 397 Check: 2700 Weight: 1.00 Name: ENSBTAP00000016907/1-357 Len: 397 Check: 2289 Weight: 1.00 Name: ENSTTRP00000009384/1-360 Len: 397 Check: 5195 Weight: 1.00 Name: bmy_11423T0/1-332 Len: 397 Check: 2656 Weight: 1.00 Name: BACU012431/1-329 Len: 397 Check: 4035 Weight: 1.00 // 1 50 ENSP00000306163/1-360 MAKAPSWAGV GALAYKAPEA LWPAEAVMDG TMEDSEAVQR ATALIEQRLA ENSBTAP00000016907/1-357 WQKHLAGRGW GPWHIKPPG- --PAEAGCDG TMADSEEVQR ATALIEERLA ENSTTRP00000009384/1-360 MTEAPSRAGV GALAYKAPGA PGPAGAVAHG AMAGSEEVQR ATALIEERLA bmy_11423T0/1-332 ---------- ---------- ---------- -MAGSEEVQK ATALIEERLA BACU012431/1-329 ---------- ---------- ---------- -MAGSEEVQK ATALIEERLA 51 100 ENSP00000306163/1-360 QEEENEKLRG -DARQKLPMD LLVLEDEKHH GAQSAALQKV KGQERVRKTS ENSBTAP00000016907/1-357 QEEENEKLRG -TTHQKLPME MLVLEDEKHH RPESPSLQKV KGQERVRKTS ENSTTRP00000009384/1-360 QEEENEKLRG TTTHQKLPME MLVLEDEKHH RPQSPSLQKV KGQERVRKTS bmy_11423T0/1-332 QEEENEKLRG -TTHQKLPME MLVLEDEKQH RPQSPSLQKV KGQERVRKTS BACU012431/1-329 QEEENEKLRG -TTHQKLPME MLVLEDEKQH RPQSPSLQKV KGQERVRKTS 101 150 ENSP00000306163/1-360 LDLRREIIDV GGIQNLIELR KKRKQKKRDA LAASHEPPPE PEEI------ ENSBTAP00000016907/1-357 LDLRREIIDV GGIQNLIQLR KKRKQKKREA LAASQEPPPE PEEI------ ENSTTRP00000009384/1-360 LDLRREIIDV GGIQNLIQLR KKRKQKKREA LAAPQEPPPE PEEI------ bmy_11423T0/1-332 LDLRREIIDV GGIQNLIQLR KKRKQKKREA LAASQEPPPE PEEIVRVLGR BACU012431/1-329 LDLRREIIDV GGIQNLIHLR KKRKQKKREA LAASQEPPPE PEEI------ 151 200 ENSP00000306163/1-360 ---------- ---------- ---------- TGPVDEETFL KAAVEGKMKV ENSBTAP00000016907/1-357 ---------- ---------- ---------- TGPVDEETFL KAAVEGKMKV ENSTTRP00000009384/1-360 ---------- ---------- ---------- TGPVDAETFL KAAVEGQMKV bmy_11423T0/1-332 TPVWAGGAGG GENGSDHSGA ASKDCIRSLQ TGPVDAETFL KAAVEGQMKV BACU012431/1-329 ---------- ---------- ---------- TGPVDAETFL KAAVQGQVKV 201 250 ENSP00000306163/1-360 IEKFLADGGS ADTCDQFRRT ALHRASLEGH MEILEKLLDN GATVDFQDRL ENSBTAP00000016907/1-357 IEKFLADGGS PDTCDQFRRT ALHRASLEGH MEILEKLLES GATVDFQDRL ENSTTRP00000009384/1-360 IEKFLADGGS PDTCDQFHRT ALHRASLEGH MEILEKLLES GVTVDFQDRL bmy_11423T0/1-332 IEKFLADGGS PDTCDQFHRT ALHRASLEGH MEILEKLLES GVTVDFQDRL BACU012431/1-329 IEKFLADGGS PDTCDQFHRT ALHRASLEGH MEILEKLLES GVTVDFQDRL 251 300 ENSP00000306163/1-360 DCTAMHWACR GGHLEVVKLL QSHGADTNVR DKLLSTPLHV AVRTGQVEIV ENSBTAP00000016907/1-357 DCTAMHWACR GGHLEVVRLL QSRGADTNVR DKLLSTPLHV AVRTGQVEIV ENSTTRP00000009384/1-360 DCTAMHWACR GGHLEVVKLL QSRGADTNVR DKLLST-LHV AVRTGHVEIV bmy_11423T0/1-332 DCTAMHWACR GGHLEVVKLL QSRGADTNVR DKLLSTPLHV AVRTGHVEIV BACU012431/1-329 DCTAMHWACR GGHLEVVKLL QSRGADTNVR DKLLSTPLHV AVRTGHVEIV 301 350 ENSP00000306163/1-360 EHFLSLGLEI NARDREGDTA LHDAVRLNRY KIIKLLLLHG ADMMTKNLAG ENSBTAP00000016907/1-357 EHFLSLGLDI NAKDREGDSA LHDAVRLNRY KIIKLLLLHG ADMMSKNLAG ENSTTRP00000009384/1-360 EHFLSLGLDI NAKDREGDSA LHDAVRLNRY KIIKLLLLHG ADMMSKNLEG bmy_11423T0/1-332 EHFLSLGLDI NAKDR----- ---------- ---------- --------KG BACU012431/1-329 EHFLSLGLDI NAKDREGDSA LHDAVRLNRY KIIKLLLLHG ADMMSKNLKG 351 400 ENSP00000306163/1-360 KTPTDLVQLW QADTRHALEH PEPGAEHNGL EGPNDSGRET PQPVPAQ ENSBTAP00000016907/1-357 KTPTDLVQLW QADTRHALEN PEPGSEQNGL EGSTESGRET PQPVAAE ENSTTRP00000009384/1-360 KTPTDLVQLW QADTRHALEH PEPGSEQNGL EGSAEGGRET PKPVPAQ bmy_11423T0/1-332 KTPTDLVQLW QADTRHALEH PEPGSEQNGL EGSAESGRET PQPVPAQ BACU012431/1-329 KTPTDLVQLW QADTRHALEH PEPGSEQNGL EGSAESGRET PQPVPAQ