KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:59 2014 Check: 00 .. Name: ENSTTRP00000009385/1-326 Len: 413 Check: 5206 Weight: 1.00 Name: bmy_11425T0/1-377 Len: 413 Check: 707 Weight: 1.00 Name: ENSP00000359680/1-327 Len: 413 Check: 2139 Weight: 1.00 Name: ENSBTAP00000016909/1-327 Len: 413 Check: 3704 Weight: 1.00 // 1 50 ENSTTRP00000009385/1-326 MLGPRVWSSV RQGLSRALSS TVGGWASGEG RKVDISGIYP PVTTPFTATA bmy_11425T0/1-377 -MCDKLWCR- ---------- --GGRSLGE- RKSNIC---- ----FFTSTW ENSP00000359680/1-327 MLGPQVWSSV RQGLSRSLSR NVGVWASGEG KKVDIAGIYP PVTTPFTATA ENSBTAP00000016909/1-327 MLVPRVWSSV RLGLSRVLSR TLRGWPSGEG RGMDLSGIYP PVTTPFTATA 51 100 ENSTTRP00000009385/1-326 EVDYGKLEEN LHKLGTFPFR GFVVQGSNGE FPFLTSSERL EVVSRVRQTL bmy_11425T0/1-377 E--------- ----GVASLA GFVVQGSNGE FPFLTSSERL EVVTRVRQAL ENSP00000359680/1-327 EVDYGKLEEN LHKLGTFPFR GFVVQGSNGE FPFLTSSERL EVVSRVRQAM ENSBTAP00000016909/1-327 EVDYGKLEEN LHKLGTLPFR GFVVQGSNGE FPFLTSSERL EVVSRARQAL 101 150 ENSTTRP00000009385/1-326 PRDK-LLAGS GCESTQATVE MTVSMAQVGA DAAMVVTPCY YHGRMNSAAL bmy_11425T0/1-377 PRDKLLLAGS GCESTQATVE MTVSMAQVGA DAAMVVTPCY YHGRMNSAAL ENSP00000359680/1-327 PKNRLLLAGS GCESTQATVE MTVSMAQVGA DAAMVVTPCY YRGRMSSAAL ENSBTAP00000016909/1-327 PKDKLLLAGS GCESTQATVE MTVSMAQVGA DAAMVVTPCY YRGRMSSAAL 151 200 ENSTTRP00000009385/1-326 IHHYTKVADL SPIPVVLYSV PANTGLDLPV DAVVTLSQHP NIVGIKDSGG bmy_11425T0/1-377 IHHYTKVADL SPIPVVLYSV PANTGLDLPV DAVVTLSQHP NIVGIKDSGG ENSP00000359680/1-327 IHHYTKVADL SPIPVVLYSV PANTGLDLPV DAVVTLSQHP NIVGMKDSGG ENSBTAP00000016909/1-327 IHHYTKVADL SPVPVVLYSV PANTGLDLPV DAVVTLSQHP NIVGIKDSGG 201 250 ENSTTRP00000009385/1-326 D--------- ---------- ---------- ---------- ---------- bmy_11425T0/1-377 DVSGSSSRLG CPPPLLFCYK LPGSSGTRFS PGLLCGFPLS CGLSGVRLNF ENSP00000359680/1-327 D--------- ---------- ---------- ---------- ---------- ENSBTAP00000016909/1-327 D--------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000009385/1-326 ---------- ---------- ---------- -------VTR IGLIVHKTRR bmy_11425T0/1-377 ESSLWDLGSH SPTLAQPPCR LVAEPVGPAL TPGLPLQVTR IGLIVHKTRR ENSP00000359680/1-327 ---------- ---------- ---------- -------VTR IGLIVHKTRK ENSBTAP00000016909/1-327 ---------- ---------- ---------- -------VTR IGLIVHKTRS 301 350 ENSTTRP00000009385/1-326 QDFQVLAGSA GFLLASYAVX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11425T0/1-377 QDFQVLAGSA GFLLASYAVG AVGGVCALAN VLGAQVCQLE RLCLTGQWED ENSP00000359680/1-327 QDFQVLAGSA GFLMASYALG AVGGVCALAN VLGAQVCQLE RLCCTGQWED ENSBTAP00000016909/1-327 QDFQVLAGSA GFLLASYAIG AVGGVCALAN VLGSQVCQLE RLCLTGQWED 351 400 ENSTTRP00000009385/1-326 XXXXXXXXXX XXXXVTRRFG IPGLKKTMDW FGYYGGPCRA PLQELSAAQE bmy_11425T0/1-377 AQKLQHRLIE PNTAVTRRFG IPGLKKTMDW FGYYGGPCRA PLRELSADQE ENSP00000359680/1-327 AQKLQHRLIE PNAAVTRRFG IPGLKKIMDW FGYYGGPCRA PLQELSPAEE ENSBTAP00000016909/1-327 AQKLQHRLIE PNTAVTRRFG IPGLKKTMDW FGYYGGPCRS PLQELSPAQE 401 450 ENSTTRP00000009385/1-326 EALRLDFTSN GWL bmy_11425T0/1-377 EALRLDFTSN GWL ENSP00000359680/1-327 EALRMDFTSN GWL ENSBTAP00000016909/1-327 EALRLDFASN GWL