KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:00:01 2014 Check: 00 .. Name: ENSP00000362392/1-520 Len: 524 Check: 9065 Weight: 1.00 Name: ENSBTAP00000016929/1-521 Len: 524 Check: 4426 Weight: 1.00 Name: bmy_04062T0/1-431 Len: 524 Check: 6224 Weight: 1.00 Name: ENSTTRP00000015600/1-521 Len: 524 Check: 6383 Weight: 1.00 // 1 50 ENSP00000362392/1-520 MAPKKSVSKA GKELEV-KKK GGKKEPVVAV EP---PLAKE MKEFYHIQIR ENSBTAP00000016929/1-521 MAPKK---KG AKEPELKKKK GGKKDPNLAN KPMEMPISEE IREFYHIQIR bmy_04062T0/1-431 MAPKKKAGKG AKEPEVKKKK GGKKDPSPAN KPMETPISEE IREFYHIQIR ENSTTRP00000015600/1-521 MAPKKKAGKG AKEPEVKKKK GGKKDPGLAN KPMEMPIGEE IREFYHIQIR 51 100 ENSP00000362392/1-520 DLEDRLARYQ RKWDELAVQE KMFRQEFEQL ANNKKEIVAF LKRTLNQQVD ENSBTAP00000016929/1-521 DLEDRLARYQ RKWDELAMQE KLFRQEFEQL ANNKKEIVAF LKRTLNQRVD bmy_04062T0/1-431 DLEDRLARYQ QKWDELAVQE KLFRQEFEQL ANNKKEIVAF LKHTLNQRVD ENSTTRP00000015600/1-521 DLEDRLARYQ QKWDELAVQE KLF-QEFEQL ANNKKEIVAY LRRTLNQRVD 101 150 ENSP00000362392/1-520 EITDLNEQLQ NLQLAKEMEK DAFEAQLAQV RHEFQETKDQ LTTENIILGG ENSBTAP00000016929/1-521 EIADLNEQLQ SLQLAKEIEK DAFEAQLAQV RHEFQETKDQ LTTENIILGG bmy_04062T0/1-431 EISDLNEQLQ TLQLAKEMEK DAFEAQLAQV RHEPVPCGGA --------GG ENSTTRP00000015600/1-521 EITNLNEQLQ S-QLAKEMEK DAFEAQLAQV RHEFQETKDQ LTTENIILGG 151 200 ENSP00000362392/1-520 KLAALEEFRL QKEEVTDKFT LLEEQVRKQE NEFRDYAYNL EKKSVLDKDR ENSBTAP00000016929/1-521 KLAALEEFRL QKEELMQKFM SLEDQLRKQE NEYKDYVHNL EKKSVLDKDR bmy_04062T0/1-431 KLAALEEFRL QKEELMEKFM LLEDQLRKQE NEYKDYVHNL EKKSVLDENR ENSTTRP00000015600/1-521 KLAALEEFRL QKEEVMEKFM LLEDQLRKQE NEHKDYVYTL EKKSVLDADR 201 250 ENSP00000362392/1-520 LRKEIIQRVN LVANEFHKVT TNRMWETTKR AIKENNGITL QMARVSQQGM ENSBTAP00000016929/1-521 LRKEIIQRVN MVATEFRKVA TSQMWDTTKR AITENNAVTL QLAKITRQGT bmy_04062T0/1-431 LKKEIIQRVN MVATEFRKVA TSQMWDTTKR AIMENNTVTL QLAKISRQGM ENSTTRP00000015600/1-521 LKKEIIQRVN LVATEFRKVA TSQMGDTTKR AIMENNTMTL QLAKISRQGM 251 300 ENSP00000362392/1-520 KLLQENEQLK GRQNNLCKQL ELLENTQKVM ARHKRGHQKI ILMLTKKCQE ENSBTAP00000016929/1-521 QLLAENEQLR GHQDDLCKQL ELLENSQKLM ARKSRGHQKV ILMLTEKCRE bmy_04062T0/1-431 QLLQENEQLR GNQDNLCKQL ELLENSQKVM ARHSRGHKKI ILMLTEKCRE ENSTTRP00000015600/1-521 QLLQENEQLR GDQDNLCRQL ELLENSQKVM ARHSRGHQKI ILMLTEKCRE 301 350 ENSP00000362392/1-520 QQQDTKEAEE LRLLLSQLEQ RSLQLQVDNQ ALKSQRDQLS LQLEQQQVDL ENSBTAP00000016929/1-521 QQQGMAEAER LRVLLGQLEQ DLLKQQQDNQ ALRNERDQLN LQLERRQAEG bmy_04062T0/1-431 QQQGRAEAKQ LRLLLSQLEQ SLMQLQKDHQ ALRSQREQLN LQLERQQAEG ENSTTRP00000015600/1-521 LQQGTAEAKQ LRLLLSQLEQ SLTQLQKDNQ ALRSQREQLN LQLERQQNEG 351 400 ENSP00000362392/1-520 QRLQQELANE QKVRASLEAA LVQATSFLQN ILQMHRDEED SDVDVTFQPW ENSBTAP00000016929/1-521 QRLQQQLSKE QEVRASLETA LAQATSFLQD IVQMQPNKED GDFDVMFQLQ bmy_04062T0/1-431 QRLQQELAEE QKVRASLETA LAQATSFLQD IVQMQPDEEG GDFDVVFQLQ ENSTTRP00000015600/1-521 QRLQQELAEE QKVRASLETA LAQATAFLQD IVQMQPDKED GDFD-DLQLQ 401 450 ENSP00000362392/1-520 HKEMLQQLLV MLSSTVATRP QKAACPHQES QSHGPPKESR PSIQLPRTGS ENSBTAP00000016929/1-521 RKEMLQQLLL MLGSAVVSSP QMAEALHRES QPCGLPREGG SSTRLLRTGS bmy_04062T0/1-431 RKEMLKHLLV MLSSAMVLRP QMAVSPRRES QSCGPPKER- ---------- ENSTTRP00000015600/1-521 CKELLKHLLV MLRSAVVLSP QMAVAPRRES QSCGPPKERR YSTQPLKTAP 451 500 ENSP00000362392/1-520 LLPQLSDITP YQPGDLGLVP RQVHIPPNPQ DLRLLSYITR VGTFRAHSSP ENSBTAP00000016929/1-521 LLQQLSGIIP YRPGDLGLVP RRIHIPPNPE DLRLLSHTTR MGNLQTYSSP bmy_04062T0/1-431 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015600/1-521 VLQQLSSVTP YQLGDLGLVP RRIHIPPNPE DLRVLSHTTR VGNLWAHSSP 501 550 ENSP00000362392/1-520 EMRAPGSLKR LEKFSLPEVP LRPK ENSBTAP00000016929/1-521 EIHTSAPQKR FKKLSLPEVS LLSK bmy_04062T0/1-431 ---------- ---------- ---- ENSTTRP00000015600/1-521 EIRTSGSPKR FKKFILPKVS LLSK