KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:01 2014 Check: 00 .. Name: ENSP00000418661/1-214 Len: 223 Check: 5805 Weight: 1.00 Name: ENSBTAP00000016930/1-216 Len: 223 Check: 7991 Weight: 1.00 Name: ENSTTRP00000015601/1-213 Len: 223 Check: 9142 Weight: 1.00 Name: bmy_04063T0/1-154 Len: 223 Check: 9480 Weight: 1.00 Name: BACU020446/1-199 Len: 223 Check: 3414 Weight: 1.00 // 1 50 ENSP00000418661/1-214 MRPGGFLGAG QRLSRAMSRC VLEPRPPGKR WMVAGLGNPG LPGTRHSVGM ENSBTAP00000016930/1-216 MGLPGLSRAG LWLSRAMSRC VLEPRPAGKR WLVAGLGNPG LPGTRHSVGM ENSTTRP00000015601/1-213 MGLFVLSRAG LWLSRAMSRC VLEPRPPGKR WLVAGLGNPG LPGTRHSVGM bmy_04063T0/1-154 ---------- ------MGR- VVGPQFPRCR PQVAGLGNPG LPGTRHSVGM BACU020446/1-199 ---------- ----RRMGR- VVGPRFPRCR PQVAGLGNPG LPGTRHSVGM 51 100 ENSP00000418661/1-214 AVLGQLARRL GVAESWTRDR HCAADLALAP LGDAQLVLLR PRRLMNANGR ENSBTAP00000016930/1-216 AVLGQLARRL GVAESWERDR RCAADLAQAS LGDAQLVLLR PRRLMNLNGH ENSTTRP00000015601/1-213 AVLGQLVRRL RVAESWARDR RCAADLAMAS LGDAQLALLR PWRLMNVNGR bmy_04063T0/1-154 AVLGQLARRL GVAESWARDR RCAADLAMAS LGDAQLVLLR PRRLMNVNGR BACU020446/1-199 AVLGQLARRL GVAESWERDR RCAADLSLAS LGDAHLVLLR PRRLMNVNGR 101 150 ENSP00000418661/1-214 SVARA--AEL FGLTAEEVYL VHDELDKPLG RLALKLGGSA RGHNGVRSCI ENSBTAP00000016930/1-216 SVAQAGQVEL FGLTAEEVYL VHDELDKPLG KVALKLGGSA RGHNGVRSCM ENSTTRP00000015601/1-213 SVAWA--TEL FGLTAEEVCL VHDELHKPLG KLALKLGGSA RGHSGVRSCI bmy_04063T0/1-154 SVARA----- ---------- --SELRAP-- ---------- ----G----- BACU020446/1-199 SVGAV----- -WTDAEEVCL VHDELHKPLG KLALKLGGSA RGHNGVRSCF 151 200 ENSP00000418661/1-214 SCLNSN---- ---AMPRLRV GIGRPAHPEA VQAHVLGCFS PAEQELLPLL ENSBTAP00000016930/1-216 SCLNSN---- ---AMPRLQV GIGRPTHRDA VQAYVLGRFS PAEQELLPPV ENSTTRP00000015601/1-213 SCLDSN---- ---AMPRLRV GIGRPTHPDT VQSYVLSYFT PAEQELLPPL bmy_04063T0/1-154 ---------- ---AMPRLRV GIGRPTHPDT VQGYVLGHFS PAEQELLPPL BACU020446/1-199 SCLNSNMSPA LGQAMPRLRV GIGRPTHPDT VQGYVLGHFS PAEQELLPPL 201 250 ENSP00000418661/1-214 LDRATDLILD HIRERSQGPS LGP ENSBTAP00000016930/1-216 LERAVDLLLG HIHQRSRESS SGP ENSTTRP00000015601/1-213 LS-ATDLLLD HIRERSQRPS SSP bmy_04063T0/1-154 LS-ATDLLLD HIRERSQRPS SGP BACU020446/1-199 LS-ATDLLLD HIRERSQRPS S--