KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:03 2014 Check: 00 .. Name: ENSP00000164305/1-554 Len: 588 Check: 6182 Weight: 1.00 Name: ENSBTAP00000016934/1-524 Len: 588 Check: 9742 Weight: 1.00 Name: ENSTTRP00000008080/1-555 Len: 588 Check: 287 Weight: 1.00 Name: bmy_13273T0/1-511 Len: 588 Check: 2817 Weight: 1.00 Name: BACU019463/1-558 Len: 588 Check: 3650 Weight: 1.00 // 1 50 ENSP00000164305/1-554 ---------- ---------- ------MRRP LSKCGMEPGG GDASLTLHGL ENSBTAP00000016934/1-524 ---------- ---------- ------MERD --------DG GGGGLFFRGL ENSTTRP00000008080/1-555 ---------- ---------- -----VPSRP RSRCRMEREG GGGSLFFRGL bmy_13273T0/1-511 RPNLVGGRAT RAASATQGWG QWRLAVPSRP RSRCRMERDG GGGSLFFRGL BACU019463/1-558 ---------- ---------- -----VPSRP RSRCRMERDG GGGSLFFRGL 51 100 ENSP00000164305/1-554 QNRSHGKIKL RKRKSTLYFN TQEKSARRRG DLLGENIYLL LFTIALRILN ENSBTAP00000016934/1-524 QNRSHEKTKL RTRKSTLYL- SPQKSTGRCG ---GENIE-- ---------- ENSTTRP00000008080/1-555 QNRPHEKMKL RTRKSTLYL- SQQKSTGHGG DLLGENIYLV LFTIALRICN bmy_13273T0/1-511 QNRSHEKMKL RTRKSTLYL- SQPKSTGRCE DLLGENIYLV LFTIALRICN BACU019463/1-558 QNRSHEKMRL RTRKSTLYL- SQQKRTGRGG DLLGENIYLV LFTIALRICN 101 150 ENSP00000164305/1-554 CFLVQTSFVP DEYWQSLEVS HHMVF----- ---NYGYLTW EWTERLRSYT ENSBTAP00000016934/1-524 --WVHSCHIP SSLY-SITLV FIL------- -QQPCLIITW KKTANNQKFT ENSTTRP00000008080/1-555 CFLVQTSFVP DEYWQSLEVA HHMVF----- --NNYGYLTW EWRERLRGYT bmy_13273T0/1-511 CFLVQTSFVP DEYWQSLEVA HHM------- ---------- ---------- BACU019463/1-558 CFLVQTSFVP DEYWQSLEVA HHMCYLTLVL NNTNYGYLTW EWTERLRGYT 151 200 ENSP00000164305/1-554 YPLIFASIYK ILHLLGKDSV QLLIWIPRLA QALLSAVADV RLYSLMKQLE ENSBTAP00000016934/1-524 TPFIFVFSSR FLHNTSKSPI LMKIWIPRLA QALLSAIADL RLYSLMKQLE ENSTTRP00000008080/1-555 YPLIFASIYK ILHLLGKDSV QLLIWIPRLA QALLSAIADL RLYSLMKQLE bmy_13273T0/1-511 ---------- ---------- ---IWIPRLA QALLSAIADL RLYSLMKQLE BACU019463/1-558 YPLIFASIYK ILHLLRKDSV QLLIWIPRLA QALLSAIADL RLYSLMKQLE 201 250 ENSP00000164305/1-554 NQEVARWVFF CQLCSWFTWY CCTRTLTNTM ETVLTIIALF YYPLEGSKSM ENSBTAP00000016934/1-524 NQQVARWVFF CQLCSWFTWY CCTRTLTNTM ETVLTIIALF YYPLEGSKSM ENSTTRP00000008080/1-555 NQQVARWVFF CQLCSWFTWY CCTRTLTNTM ETVLTITALF YYPLEGSKFM bmy_13273T0/1-511 NQQVARWV-- --LCSWFTWY CCTRTLTNTM ETVLTVIALF YYPLEGSKFM BACU019463/1-558 NQQVARWVFF CQLCSWFTWY CCTRTLTNTM ETVLTIIALF YYPLEGSKFM 251 300 ENSP00000164305/1-554 NSVKYSSLVA LAFIIRPTAV ILWTPLLFRH FCQEPRKLDL ILHHFLPVGF ENSBTAP00000016934/1-524 NSVKYSSLVA LAFIIRPTAV IPWIPLLFRH FWQEQRKLDL ILHQFLPVGF ENSTTRP00000008080/1-555 NSVKYSSLVA LAFIIRPTAV ILWIPLLFRH FWQEQRKLDL ILHQFLPVGF bmy_13273T0/1-511 NSVKYSSLVA LAFIIRPTAV IPWIPLLFRH FWQEQRKLDL ILHQFLP--- BACU019463/1-558 NSVKYSSLVA LAFIIRPTAV IPWIPLLFRH FWQEQRKLDL ILHQFLPVGF 301 350 ENSP00000164305/1-554 VTLSLSLMID RIFFGQWTLV QFNFLKFNVL QNWGTFYGSH PWHWYFSQGF ENSBTAP00000016934/1-524 VTLSLSLIID RIFFGQWTLV QYNFLKFNVL QDLGSFYGSH PWHWYFSQGF ENSTTRP00000008080/1-555 VTLSFSLIID RIFFGQWTLV QYNFLKFNVL QNVGSFYGSH PWHWYFSQGF bmy_13273T0/1-511 ---------- ------WTLV QYNFLKFNVL QNVGSFYGSH PWHWYFSQGF BACU019463/1-558 VTLSFSLIID RIFFGQWTLV QYNFLKFNVL QNVGSFYGSH PWHWYFSQGF 351 400 ENSP00000164305/1-554 PVILGTHLPF FIHGCYLAPK RYRILLVTVL WTLLVYSMLS HKEFRFIYPV ENSBTAP00000016934/1-524 PAVLGTHLPF FIHGCFLAPK RYRIFLVTVL WTLLVYSMLS HKEFRFIYPV ENSTTRP00000008080/1-555 PAVLGTHLPF FIHGCLLAPK RYRIFLVTVL WTLLVYSMLS HKEFRFIYPV bmy_13273T0/1-511 PAVLGTHLPF FIHGCLLAPK RYRIFLVTVL WTLLVYSMLS HKEFRFIYPV BACU019463/1-558 PAVLGTHLPF FIHGCLLAPK RYRIFLVTVL WTLLVYSMLS HKEFRFIYPV 401 450 ENSP00000164305/1-554 LPFCMVFCGY SLTHLKTWKK PALSFLFLSN LFLALYTGLV HQRGTLDVMS ENSBTAP00000016934/1-524 LPFCMVFCGY SLNNLKTWKK PALSFLFLSN MLLALYTGLV HQRGTLDVMT ENSTTRP00000008080/1-555 LPFCMVFCGY SLNNLKLWKK PALSFLFLSN MFFALYTGLV HQRGTLDVMT bmy_13273T0/1-511 LPFCMVFCGY SLNNLKLWKK PALSFLFLSN MFFALYTGLV HQRGTLDVMT BACU019463/1-558 LPFCMVFCGY SLSNLKLWKK PALSFLFLSN MFFALYTGLV HQRGTLDVMT 451 500 ENSP00000164305/1-554 HIQKVCYNNP NKSSASIFIM MPCHSTPYYS HVHCPLPMRF LQCPPDLTGK ENSBTAP00000016934/1-524 NIQELSYNNT NVSSASVLMM MPCHSTPYYS HVHYPLPMRF LQCPPDLTGK ENSTTRP00000008080/1-555 NIQELCYNNT NISSASVLMM MPCHSTPYYS HVHHPLPMRF LQCPPDLTGK bmy_13273T0/1-511 NIQELCYNNT NISSASVLMM MPCHSTPYYS HVHHPLPMRF LQCPPDLTGK BACU019463/1-558 NIRELCYNNT DISSASVLMM MPCHSTPYYS HVHHPLPMRF LQCPPDLTGK 501 550 ENSP00000164305/1-554 SHYLDEADVF YLNPLNWLHR EFHDDASLPT HLITFSILEE EISAFLISSN ENSBTAP00000016934/1-524 TDYLVEADMF YLNPLKWLYM EFQNDSQLPT HLIMFSVLEE EISPFLISNN ENSTTRP00000008080/1-555 SDYLVEADIF YLNPLKWLYR EFQNDSTLPT HLIIFSILEE EINPFLISNK bmy_13273T0/1-511 GDYLVEADIF YLNPLKWLYR EFQNDSTLPT HLIIFSILEE EINPFLISNK BACU019463/1-558 GDYLVEADIF YLNPLKWLYR EFQNDSTLPT HLIIFSILEE EINPFLISNK 551 600 ENSP00000164305/1-554 YKRTAVFFHT HLPEGRIGSH IYVYERKLKG KFNMKMKF ENSBTAP00000016934/1-524 YERTAVFFHT HFPESRTGSH IYVYERKLKG KLNQR--- ENSTTRP00000008080/1-555 YERTAVFFHT HFPERRTGSH IYVYERKLKG KLNMNMKF bmy_13273T0/1-511 YERTAVFFHT HFPERRTGSH IYVYERKLKG KLNQT--- BACU019463/1-558 YERTAVFFHT HFPESRTGSH IYVYERKLKG KLNQ----