KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:04 2014 Check: 00 .. Name: ENSP00000403400/1-807 Len: 844 Check: 3302 Weight: 1.00 Name: ENSBTAP00000016938/1-760 Len: 844 Check: 4137 Weight: 1.00 Name: bmy_13272T0/1-669 Len: 844 Check: 2228 Weight: 1.00 Name: BACU016378/1-794 Len: 844 Check: 993 Weight: 1.00 Name: ENSTTRP00000008089/1-760 Len: 844 Check: 7876 Weight: 1.00 // 1 50 ENSP00000403400/1-807 MSENSSDSDS SCGWTVISHE GSDIEMLNSV --TPTDSCEP APECSSLEQE ENSBTAP00000016938/1-760 MSENSSDSDS SCGWTVINHE GSDIEMVNSE HGAASDSCEP APECASLSQE bmy_13272T0/1-669 ---------- ---------- ---------- ---------- ---------- BACU016378/1-794 MSENSSDSDS SCGWTVINHE GSDIEMVNSE HGAANDSCEL TPECSSLSQE ENSTTRP00000008089/1-760 MSENSSDSDS SCGWTVINHE GSDTEMMNSV --VSSDSCEL TPECSSLSQE 51 100 ENSP00000403400/1-807 ELQALQIEQG ESSQNGTVLM EETAYPALEE TSSTIEAEEQ KIPEDSIYIG ENSBTAP00000016938/1-760 ELQELQVEQG ESSQNGTVLL GGAAYPALEE MKSALEGEEE KLPDDNLYFG bmy_13272T0/1-669 --------MS ESSQNGAVLM GGTTYPALEE MKSALEGEEE KLPDDNLYFG BACU016378/1-794 ELRVLQLEQG ESSQNGTVLM GGTTYPALEE MKSALEGEEE KLPDDNLYFG ENSTTRP00000008089/1-760 ELQVLQLEQG ESSQNGTVLM GGATYPALEE MKSALEGEEE KLPDDNLYFG 101 150 ENSP00000403400/1-807 TASDDSDIVT LEPPKLEEIG NQ-EVVIVEE AQSSEDFNMG SSSSSQYTFC ENSBTAP00000016938/1-760 TVSDDSDIVT LEPPKLEDIG NQEEALIVKE AESPEDFNMG SSSSSQYTFC bmy_13272T0/1-669 TVSDDSDIVT LEPPKLEETG NQEETIIVKE AESPEDFNMG SSSSSQYTFC BACU016378/1-794 TVSDDSDIVT LEPPKLEETG TQEETIIVKE AESPEDFNMG SSSSSQYTFC ENSTTRP00000008089/1-760 TVSDDSDIVT LEPPKLEETG SQEEAIIVKE AQSPEDFNMG SSSSSQYTFC 151 200 ENSP00000403400/1-807 QPET------ ---------- ---------- ------VFSS QPSDDESSSD ENSBTAP00000016938/1-760 QPET------ ---------- ---------- ------VFSS QPSDDESSSD bmy_13272T0/1-669 QPET------ ---------- ---------- ---------- ---------- BACU016378/1-794 QPETERWWEK LWKIPECIRG WDDQLKHHVP SQLAFQVFSS QPSDDESSSD ENSTTRP00000008089/1-760 QPET------ ---------- ---------- ------VFSS QPSDDESSSD 201 250 ENSP00000403400/1-807 ETSNQPSPAF RRRRARKKTV SASESEDRLV AEQETEPSKE LSKRQFSSGL ENSBTAP00000016938/1-760 ETSHQPSATF RRRRARKKTV SSSESEERLL AEQEPEPPQE LCKRQFSSGL bmy_13272T0/1-669 ---------- ---------- ---------- ---------- ---------- BACU016378/1-794 ETSHQPSPAF RRRRARKKTV SSSESEERLL AEQETEPSKE PCKRQFNSGL ENSTTRP00000008089/1-760 ETSHQPSPAF RRRRARKKTV SSSESEERLL AEQETEPSKE PCKRQFNSGL 251 300 ENSP00000403400/1-807 NKCVILALVI AISMGFGHFY GTIQIQKRQQ LVRKIHEDEL NDMKDYLSQC ENSBTAP00000016938/1-760 NKCVILALVI AISMGFGHFY GTIQIQKRQQ LVKKIHEDEL NDMKDYLSQC bmy_13272T0/1-669 ---------- ---------- GTIQIQKRQQ LVRKIHEDEL NDMKDYLSQC BACU016378/1-794 NKCVILALVI AISMGFGHFY GTIQIQKRQQ LVRKIHEDEL NDMKDYLSQC ENSTTRP00000008089/1-760 NKCVILALVI AISMGFGHFY GTIQIQKRQQ LVRKIHKDEL NDMKDYLSQC 301 350 ENSP00000403400/1-807 QQEQESFIDY KSLKENLARC WTLTEAEKMS FETQKTNLAT ENQYLRVSLE ENSBTAP00000016938/1-760 QQEQESLIEY KSLKENLARC WTHTEAEKMS FETQKKNLDT ENQYLRTSLE bmy_13272T0/1-669 QQEQGSFIDF KSLKENLARC WTHTEAEKMS FETQKKNLDT ENQYLRISLE BACU016378/1-794 QQEQGSFIDF KSLKENLARC WTHTEAEKMS FETQKKNLDT ENQYLRISLK ENSTTRP00000008089/1-760 QQEQGSFIDY KSLKENLARC WTHTEAEKTS FETQKRNLDT ENQYLRISLE 351 400 ENSP00000403400/1-807 KEEKALSSLQ EELNKLREQI RILEDKGTST ELVKENQKLK QHLEEEKQKK ENSBTAP00000016938/1-760 KEEKALSSLQ EELRKLREQI RILEDKGTSA ELVTENQKLK QHLEEEKLKT bmy_13272T0/1-669 KEEKALSSLQ EELRKLREQI RILEDKGTSA DLVTENQKLK QHLEEEKLKT BACU016378/1-794 KEEKALSSLQ EELRKLREQI RILEDKGTSA ELFTENQKLK QHLEEEKLKT ENSTTRP00000008089/1-760 KEEKALSSLQ EELRKLREQI RILEDKGTSA ELVTENQKLK QHLEEEKLKT 401 450 ENSP00000403400/1-807 HSFLSQRETL LTEAKMLKRE LERERLVTTA LRGELQQLSG SQLHGKSDSP ENSBTAP00000016938/1-760 HSFLNQRETL LAEAKMLRKE LERERLITMA LRVELQQLSS SHSYGNPDSP bmy_13272T0/1-669 QSFLNQKETL LAEAKMLRRE LEREQLITMA LRVELQQLSS SQSYSNPDSP BACU016378/1-794 QSFLNQKETL LAEAKMLRRE LEREQLITMA LRVELQQLSS SQSYSNPDSP ENSTTRP00000008089/1-760 QSFLNQKETL LAEAKMLRRE LEREQLITMA LRVELQQLSS SQSYSNPDSP 451 500 ENSP00000403400/1-807 NVYTEKKEIA ILRERLTELE RKLTFEQQRS DLWERLYVEA KDQNGKQGTD ENSBTAP00000016938/1-760 SVVTEKKEIE MLRERLTELE RKLTFEQQRS DLWERLYVEA KDQNEKQETD bmy_13272T0/1-669 SVVTENKEIE VLRERLTELE RKLNFEQQRS DLWERLYVEA KDQNGKQETD BACU016378/1-794 SVVTENKEIE VLRERLTELE RKLNFEQQRS DLWERLYVEA KDQNGKQETD ENSTTRP00000008089/1-760 SVVTEKKEIE VLRERLTELE RKLNFEQQRS DLWERLYVEA KDQNGKQETD 501 550 ENSP00000403400/1-807 GKKKGGRGSH RAKNKSKETF LGSVKETFDA MKNSTKEFVR HHKEKIKQAK ENSBTAP00000016938/1-760 GKKKGNRGNH RAKNKSKETF LGSVKETFDA MKNSTKEFVR HHKEKIKQAK bmy_13272T0/1-669 GKKKGNRGNH RAKNKSKETF LGSVKETFDA MKNSTKEFVR HHKEKIKQAK BACU016378/1-794 GKKKGNRGNH RAKNKSKETF LGSVKETFDA MKNSTKEFVR HHKEKIKQAK ENSTTRP00000008089/1-760 GKKKGNRGNH RAKNKSKETF LGSVKETFDA MKNSTKEFVR HHKEKIKQAK 551 600 ENSP00000403400/1-807 EAVKENLKKF SDSVKSTFRH FKDTTKNIFD EKGNKRFGAT KE-AAEKPRT ENSBTAP00000016938/1-760 EAVKENLKKF SDSVKSTFRH FKDTTKNIFD EKGNKRFGAT KETAAKKPTT bmy_13272T0/1-669 EAVKENLKKF SDSVKSTFRH FKDTTKNIFD EKGNKRFGAT KEAAAKKPTT BACU016378/1-794 EAVKENLKKF SDSVKSTFRH FKDTTKNIFD EKGNKRFGAT KEAAAKKPTT ENSTTRP00000008089/1-760 EAVKENLKKF SDSVKSTFRH FKDTTKNIFD EKGNKRFGAT KEAAAKKPTT 601 650 ENSP00000403400/1-807 VFSDYLHPQY KAPTENHHNR GPTMQNDGRK EKPVHFKEFR KNTNSKKCSP ENSBTAP00000016938/1-760 -FSEYFHPQY KARTQNQNSR GPTMQREGRK EKP-HFEEFG KNTNSQKCSA bmy_13272T0/1-669 VFSEYLYPQY KAHTQNQNSR GPTTQRERRK EKP-HFEEFG KNTNSQKCSA BACU016378/1-794 VFSEYLYPQY KAHTQNQNSR GPTTQRERRK EKP-HFEEFG KNTHSQKCSA ENSTTRP00000008089/1-760 VFSEYLYPQY KARTQNQNSR GPTTQRERRK EKP-HFEEFG KNTNSQKCSA 651 700 ENSP00000403400/1-807 GHDCRENSHS FRKACSGVFD CAQQESMSLF NT-VVNPIRM DEFRQIIQRY ENSBTAP00000016938/1-760 EHDCGGNYNS FRKACSGVFE CAQQESINLF NVKMLNPVRI DEFRQLIEGY bmy_13272T0/1-669 EHDCGENYNS FRKACSGVFE CAQQESINLF NVKTLNPVRI DEFRQLIERY BACU016378/1-794 EHDCGENYNS FRKACSGVFE CAQQESINLF NVKMLNPVRI DEFRQLIERY ENSTTRP00000008089/1-760 EHDCGENYNS FRKACSGVFE CAQQESINLF NVKMLNPVRI DEFRQLIERY 701 750 ENSP00000403400/1-807 MLKELDTFCH WNELDQFINK FFLNGVFIHD QKLFTDFVND VKDYLRNMKE ENSBTAP00000016938/1-760 LLEKLDSFHH WKELDHFINK FFLNGVFIHD QKLFTDFVND VKDYLKDMKE bmy_13272T0/1-669 LLEKLDSFHH WKELDHFINK FFLNGVFIHD QKLFTDFVND VKDYLKDMKE BACU016378/1-794 LLEKLDSFHH WKELDHFINK FFLNGVFIHD QKLFTDFVND VKGYLKDMKE ENSTTRP00000008089/1-760 LLEKLDSFHH WKELDHFINN FFLNGIFIHD QKLFTDFVND VKDYLKDMKE 751 800 ENSP00000403400/1-807 YEVDNDGVFE KLDEYIYRHF FGHTFSPPYG PSRPDKKQRM VNIENSRHRK ENSBTAP00000016938/1-760 YQVDNDGVFE KLDGYIYRHF FGHTFSPPYG P-------RS VYIAPCY--- bmy_13272T0/1-669 YQVDNDGVFE KLDGYMYRHF FGHTFSPPYG PSRPDKKQRM VNIESSRHRK BACU016378/1-794 YQVDNDGVFE KLDGYMYRHF FGHTFSPPYG P-------RS VYIAPCYY-- ENSTTRP00000008089/1-760 YQVDNDGVFE KLDGYIYRHF FGHTFSPPYG P-------RS VYIAPCYY-- 801 850 ENSP00000403400/1-807 QEQKHLQPQP YKREGKWHKY GRTNGRQMAN LEIELGQLPF DPQY ENSBTAP00000016938/1-760 ---------- ------YNSF ---------- ---------- ---- bmy_13272T0/1-669 QEQKHPQPQP YKREGKWHKY GRTNGRHMAN LEIELGQLPF DPKY BACU016378/1-794 ---------- ------YNSF ---------- ---------- ---- ENSTTRP00000008089/1-760 ---------- ------YNSF ---------- ---------- ----