KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:05 2014 Check: 00 .. Name: BACU006337/1-515 Len: 587 Check: 2630 Weight: 1.00 Name: ENSP00000376337/1-485 Len: 587 Check: 8369 Weight: 1.00 Name: ENSBTAP00000016949/1-410 Len: 587 Check: 7609 Weight: 1.00 Name: ENSTTRP00000006243/1-382 Len: 587 Check: 9946 Weight: 1.00 Name: bmy_17374T0/1-453 Len: 587 Check: 9619 Weight: 1.00 // 1 50 BACU006337/1-515 ---------- ---------- ---------- ---------- ---------- ENSP00000376337/1-485 MAAELYAPAS AAAADLANSN AGAAVGRKAG PRSPPSAPAP APPPPAPAPP ENSBTAP00000016949/1-410 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006243/1-382 ---------- ---------- ---------- ---------- ---------- bmy_17374T0/1-453 ---------- ---------- ---------- --GRPSAPLP ALPPPAPAPP 51 100 BACU006337/1-515 ---------- ---------- -RNALMFNNE LMADVHFVVG PPGAARRVPA ENSP00000376337/1-485 TLGNNHQESP GWRCCRPTLR ERNALMFNNE LMADVHFVVG PPGATRTVPA ENSBTAP00000016949/1-410 ---------- ---------- -----MFNNE LMADVHFVVG PPGAARRVPA ENSTTRP00000006243/1-382 ---------- ---------- ---------- ---------- ---------- bmy_17374T0/1-453 ALDNNNLESP NWQSFHPTLR ERNALMFNNE LMADVHFVVG PPGAARRVPA 101 150 BACU006337/1-515 HKYVLAVGSS VFYAMFYGDL AEVKSEIHIP DVEPTAFLIL LKYMYSDEID ENSP00000376337/1-485 HKYVLAVGSS VFYAMFYGDL AEVKSEIHIP DVEPAAFLIL LKYMYSDEID ENSBTAP00000016949/1-410 HKYVLAVGSS VFYAMFYGDL AEVKSEIHIP DVEPAAFLIL LKYMYSDEID ENSTTRP00000006243/1-382 --YVLAVGSS VFYAMFYGDL AEVKSEIHIP DVEPTAFLIL LKYMYSDEID bmy_17374T0/1-453 HKYVLAVGSS VFYAMFYGDL AEVKSEIHIP DVEPTAFLIL LKYMYSDEID 151 200 BACU006337/1-515 LEADTVLATL YAAKKYIVPA LAKACVNFLE TSLEAKNACV LLSQSRLFEE ENSP00000376337/1-485 LEADTVLATL YAAKKYIVPA LAKACVNFLE TSLEAKNACV LLSQSRLFEE ENSBTAP00000016949/1-410 LEADTVLATL YAAKKYIVPA LAKACVNFLE TSLEAKNACV LLSQSRLFEE ENSTTRP00000006243/1-382 LEADTVLATL YAAKKYIVPA LAKACVNFLE TSLEAKNACV LLSQSRLFEE bmy_17374T0/1-453 LEADTVLATL YAAKKYIVPA LAKACVNFLE TSLEAKNACV LLSQSRLFEE 201 250 BACU006337/1-515 PELTQRCWEV IDAQAEMALR SEGFCEIDWQ KLEIIVTREA LNTKEAVVFE ENSP00000376337/1-485 PELTQRCWEV IDAQAEMALR SEGFCEIDRQ TLEIIVTREA LNTKEAVVFE ENSBTAP00000016949/1-410 PELTQRCWEV IDAQAEMALR SEGFCEIDWQ TLEIIVTREA LNTKEAVVFE ENSTTRP00000006243/1-382 PELTQRCWEV IDAQAEMALR SEGFCEIDWQ TLEIIVMREA LNTKEAVVFE bmy_17374T0/1-453 PELTQRCWEV IDAQAEMALR SEGFCEIDWQ TLEIIVTREA LNTKEAVVFE 251 300 BACU006337/1-515 AVLSWAEAEC KRQGLPVTPR NKRHVLGPAL YLVRIPTMTL EEFANGAAQS ENSP00000376337/1-485 AVLNWAEAEC KRQGLPITPR NKRHVLGRAL YLVRIPTMTL EEFANGAAQS ENSBTAP00000016949/1-410 AVLSWAEAEC KRQGLPATPR NKRHVLGPAL YLVRIPTMTL EEFANGAAQS ENSTTRP00000006243/1-382 AVLSWAEAEC KRQGLPATPR NKRHVLGPAL YLVRIPTMTL EEFANGAAQS bmy_17374T0/1-453 AVLSWAEAEC KRQGLPVTPR NKRHVLGPAL YLVRIPTMTL EEFANGAAQS 301 350 BACU006337/1-515 DILTLEETHN IFLWYTAANK PLLEFPLTKR KGLAPQTCHR FQSSAYRSNQ ENSP00000376337/1-485 DILTLEETHS IFLWYTATNK PRLDFPLTKR KGLAPQRCHR FQSSAYRSNQ ENSBTAP00000016949/1-410 DILTLEETHN IFLWYTAANK PLLEFPLTKR KGLAPQRCHR FQSSAYRSNQ ENSTTRP00000006243/1-382 DILTLEETHN IFLWYTAANK PLLEFPLTKR KGLAPQRCHR FQSSAYRSNQ bmy_17374T0/1-453 DILTLEETHN IFLWYTAANK PLLEFPLTKR KGLAPQTCHR FQSSAYRSNQ 351 400 BACU006337/1-515 WRYRGRCDSI QFAVDRRVFI AGLGLYGSSS GRAEYSVKIE LKRLGVVLAQ ENSP00000376337/1-485 WRYRGRCDSI QFAVDRRVFI AGLGLYGSSS GKAEYSVKIE LKRLGVVLAQ ENSBTAP00000016949/1-410 WRYRGRCDSI QFAVDRRVFV AGLGLYGSSS GKAEYSVKIE LKRLGVVLAQ ENSTTRP00000006243/1-382 WRYRGRCDSI QFA-DRRVFI AGLGLYGSRS GRAEYSVKIE LKRLGVVLAQ bmy_17374T0/1-453 WRYRGRCDSI QFAVDRRVFI AGLGLYGSSS GRAEYSVKIE LKRLGVVLAQ 401 450 BACU006337/1-515 NLTTFVSDGS SSTFSVWFEH PVQVEQDTFY TASAVLDGSE LSYFGQEGMT ENSP00000376337/1-485 NLTKFMSDGS SNTFPVWFEH PVQVEQDTFY TASAVLDGSE LSYFGQEGMT ENSBTAP00000016949/1-410 NLTKFVSDGS SNTFSVWFEH PVQVEQDTFY TASAVLDGSE LSYFGQEGMT ENSTTRP00000006243/1-382 NLTTFVSDGS SSTFSVWFEH PVQVEQDTFY TASAVLDGSE LSYFGQEGMT bmy_17374T0/1-453 NLTTFVSDGS SSTFSVWFEH PVQVEQDTFY TASAVLDGSE LSYFGQEGMT 451 500 BACU006337/1-515 EVQCGXXXXX XXXXQHQRDR GPGWPDPRAH LLRLRRCGVA GVHGEWQALS ENSP00000376337/1-485 EVQCGKVAFQ F--------- ---------- -----QCSSD STNG------ ENSBTAP00000016949/1-410 EVQCGKVTFQ F--------- ---------- -----QCSSD STNG------ ENSTTRP00000006243/1-382 EVQCGKVTFQ F--------- ---------- -----QCSSD STNG------ bmy_17374T0/1-453 EVQCGKVTFQ F--------- ---------- -----QCSSD STNG------ 501 550 BACU006337/1-515 LQAARDPPPR RLRSRRASSA SGRLEPEAVT QDTFLRSQSL GLYISCTLGR ENSP00000376337/1-485 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016949/1-410 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006243/1-382 ---------- ---------- ---------- ---------- ---------- bmy_17374T0/1-453 ---------- ---------- ---------- ---------- ---------- 551 600 BACU006337/1-515 TSQVEGTRQA PDSLQGAPTP PALRALPSLA SSWILF- ENSP00000376337/1-485 ---------- -TGVQGGQIP ---------- -ELIFYA ENSBTAP00000016949/1-410 ---------- -TGVQGGQIP ---------- -ELIFYA ENSTTRP00000006243/1-382 ---------- -TGVQGGQIP ---------- -ELIFYA bmy_17374T0/1-453 ---------- -TGVQGGQIP ---------- -ELIFYA