KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:06 2014 Check: 00 .. Name: bmy_00061T0/1-716 Len: 973 Check: 9651 Weight: 1.00 Name: BACU017969/1-665 Len: 973 Check: 3229 Weight: 1.00 Name: ENSP00000259708/1-637 Len: 973 Check: 4597 Weight: 1.00 Name: ENSTTRP00000006632/1-636 Len: 973 Check: 764 Weight: 1.00 Name: ENSBTAP00000016955/1-612 Len: 973 Check: 700 Weight: 1.00 // 1 50 bmy_00061T0/1-716 ---------- ---------- ---------- ---------- ---------- BACU017969/1-665 MMDLKAQYRQ ERQPDGRTAE FLLSSRLNTT TKGYIQPRQG PPARMSGLVL ENSP00000259708/1-637 ---------- ---------- ------MEVT GFGVTRPGKV PQARMSGLVL ENSTTRP00000006632/1-636 ---------- ---------- ------IEMT GLGVTSPGKV PQ-RMSGLVL ENSBTAP00000016955/1-612 ---------- ---------- ---------- ---------- ----MSGLVL 51 100 bmy_00061T0/1-716 ---------- ---------- ---------- ---------- ---------- BACU017969/1-665 GQRDEPAGHR LSQEEILGST RLVSQGLEAL HSEHQAVLQS LSQTIECLQQ ENSP00000259708/1-637 GQRDEPAGHR LSQEEILGST RLVSQGLEAL RSEHQAVLQS LSQTIECLQQ ENSTTRP00000006632/1-636 GQRDEPAGHR LSQEEILGST RLVSQGLEAL HSEHQAVLQS LSQTIECLQQ ENSBTAP00000016955/1-612 GQRDEPAGHR LSQEEILGST RLVSQGLEAL HSEHQAVLQS LSQTIECLQQ 101 150 bmy_00061T0/1-716 ---------- ---------- ---------M LLLPF----- ---------- BACU017969/1-665 GGHEEGLVHE KARQLRHSME NIELGLSEAQ VMLALANHLS TVESEKQKLR ENSP00000259708/1-637 GGHEEGLVHE KARQLRRSME NIELGLSEAQ VMLALASHLS TVESEKQKLR ENSTTRP00000006632/1-636 GGHEEGLVHE KARQLRRSME NIELGLSEAQ VMLALANHLS TVESEKQKLR ENSBTAP00000016955/1-612 GGHEEGLVHE KARQLRRSME NIELGLSEAQ VMLALANHLS TVESEKQKLR 151 200 bmy_00061T0/1-716 ---------- ---------- ---------- ---------- ---------- BACU017969/1-665 AQVRRLCQEN QWLRDELAGT QQRLQRSEQA VAQLEEEKKH LEFLGQLRQY ENSP00000259708/1-637 AQVRRLCQEN QWLRDELAGT QQRLQRSEQA VAQLEEEKKH LEFLGQLRQY ENSTTRP00000006632/1-636 AQVRRLCQEN QWLRDELAGT QQRLQRSEQA VAQLEEEKKH LEFLGQLRQY ENSBTAP00000016955/1-612 AQVRRLCQEN QWLRDELAGT QQRLQRSEQA VAQLEEEKKH LEFLGQLRQY 201 250 bmy_00061T0/1-716 ------QEEK EGDASKDSLD DLFPNEEEED PSNGLARGPG ---AQHSGYE BACU017969/1-665 DEDGHTAEEK EGDASKDSLD DLFPNEEEED PSNGLSRGPG ---AQHSGYE ENSP00000259708/1-637 DEDGHTSEEK EGDATKDSLD DLFPNEEEED PSNGLSRGQG ATAAQQGGYE ENSTTRP00000006632/1-636 DEDGHTAEEK EGDASKDSLD DLFPNEEEED PSNGXXXXXX XXXXXXXGYE ENSBTAP00000016955/1-612 DEDGHAAEEK EGDASKDSLD DLFPNEEEED PSNGLSRGQG ---AQHSGYE 251 300 bmy_00061T0/1-716 IPARLRTLHN LVIQYAAQGR YEVAVPLCKQ ALEDLER-TS GRGHPDVATM BACU017969/1-665 IPARLRTLHN LVIQYAAQGR YEVAVPLCKQ ALEDLER-TS GRGHPDVATM ENSP00000259708/1-637 IPARLRTLHN LVIQYAAQGR YEVAVPLCKQ ALEDLER-TS GRGHPDVATM ENSTTRP00000006632/1-636 IPARLRTLHN LVIQYAAQGR YEVAVPLCKQ ALEDLER-TS GRGHPDVATM ENSBTAP00000016955/1-612 IPARLRTLHN LVIQYAAQGR Y-VAVPLCKQ ALEEVRRWLS GRVWANPLSL 301 350 bmy_00061T0/1-716 LNILALVYRD QNKYKEAALL ------LNDA LSIRESTLGR DHPAVAATLN BACU017969/1-665 LNILALVYRD QNKYKEAAHL LNXXXXLNDA LSIRESTLGR DHPAVAATLN ENSP00000259708/1-637 LNILALVYRD QNKYKEAAHL ------LNDA LSIRESTLGP DHPAVAATLN ENSTTRP00000006632/1-636 LNILALVYRD QNKYKEAALL ------LNDA LSIRESTLGR DHPAVAATLN ENSBTAP00000016955/1-612 LCS----YRD QNKYKEAALL ------LNDA LSIRESTLGR DHPAVAATLN 351 400 bmy_00061T0/1-716 NLAVLYGKRG KYKEAEPLCQ RALEIREKVL GTNHPDVAKQ LNNLALLCQN BACU017969/1-665 NLAVLYGKRG KYKEAEPLCQ RALEIREK-- ---------- ---------- ENSP00000259708/1-637 NLAVLYGKRG KYKEAEPLCQ RALEIREKVL GTNHPDVAKQ LNNLALLCQN ENSTTRP00000006632/1-636 NLAVLYGKRG KYKEAEPLCQ RALEIREKVL GTNHPDVAKQ LNNLALLCQN ENSBTAP00000016955/1-612 NLAVLYGKRG KYKEAEPLCQ RALEIREKVL GTNHPDVAKQ LNNLALLCQN 401 450 bmy_00061T0/1-716 QGKYEAVERY YRRALAIYEG QLGPDNPNVA RTKNNLASCY LKQGKYAEAE BACU017969/1-665 -GKYEAVERY YRRALAIYEG QLGPDNPNVA RTKNNLASCY LKQGKYAEAE ENSP00000259708/1-637 QGKYEAVERY YQRALAIYEG QLGPDNPNVA RTKNNLASCY LKQGKYAEAE ENSTTRP00000006632/1-636 QGKYEAVERY YRRALAIYEG QLGPDNPNVA RTKNNLASCY LKQGKYAEAE ENSBTAP00000016955/1-612 QGKYEAVERY YRRALAIYEG QLGPDNPNVA RTKNNLASCY LKQGKYAEAE 451 500 bmy_00061T0/1-716 TLYKEILTRA HVQEFGSVDA PFSNLATPSH VSPPDDHKPI WMHAEEREEM BACU017969/1-665 TLYKEILTRA HVQEFGSVD- ---------- ----DDHKPI WMHAEEREEM ENSP00000259708/1-637 TLYKEILTRA HVQEFGSVD- ---------- ----DDHKPI WMHAEEREEM ENSTTRP00000006632/1-636 TLYKEILTRA HVQEFGSVD- ---------- ----DDHKPI WMHAEEREEM ENSBTAP00000016955/1-612 TLYKEILTRA HVQEFGSVD- ---------- ----DDHKPI WMHAEEREEM 501 550 bmy_00061T0/1-716 SKVSGGPSLG SPRLPGPPTY SCPSPAPHFP SKHQPQVHGA FPSPACIPAL BACU017969/1-665 SK-------- ---------- ---------- ---------- ---------- ENSP00000259708/1-637 SK-------- ---------- ---------- ---------- ---------- ENSTTRP00000006632/1-636 SK-------- ---------- ---------- ---------- ---------- ENSBTAP00000016955/1-612 SK-------- ---------- ---------- ---------- ---------- 551 600 bmy_00061T0/1-716 RQLVPQRLGT LISGFTSRSV LLQSRHREGS TPYAEYGGWY KACKSVFFSF BACU017969/1-665 ---------- ---------- ---SRHREGS TPYAEYGGWY KACKV----- ENSP00000259708/1-637 ---------- ---------- ---SRHHEGG TPYAEYGGWY KACKV----- ENSTTRP00000006632/1-636 ---------- ---------- ---SRHREGS TPYAEYGGWY KACKV----- ENSBTAP00000016955/1-612 ---------- ---------- ---IRHREGS TPYAEYGGWY KACKV----- 601 650 bmy_00061T0/1-716 PGLPRHSPTV NTTLRNLGAL YRRQGKLEAA ETLEECALRS RKQ------- BACU017969/1-665 -----SSPTV NTTLRNLGAL YRRQGKLEAA ETLEECALRS RKQVRDQEGK ENSP00000259708/1-637 -----SSPTV NTTLRNLGAL YRRQGKLEAA ETLEECALRS RRQ------- ENSTTRP00000006632/1-636 -----SSPTV NTTLRNLGAL YRRQGKLEAA ETLEECALRS RKQ------- ENSBTAP00000016955/1-612 -----SSPTV NTTLRNLGAL YRRQGKLEAA ETLEECALRS RKQ------- 651 700 bmy_00061T0/1-716 ---------- ---------- ---------- ----VRDQEG KEV------C BACU017969/1-665 EVCKGTDPIS QTKVAELLGE GDSGRTSQEG LGGSVKFEGG EDASVAVEWS ENSP00000259708/1-637 ----GTDPIS QTKVAELLGE SDGRRTSQEG PGDSVKFEGG EDASVAVEWS ENSTTRP00000006632/1-636 ----GTDPIS QTKVAELLGE GDSGRTSQEG LGGSVKFEGG EDASVAVEWS ENSBTAP00000016955/1-612 ----GTDPIS QTKVAELLGE GDSGRTSQEG LGGSVKFEGG EDASVAVEWS 701 750 bmy_00061T0/1-716 KDGSGALQRS GSLGKIRDVL RRSSELLVRK LQGTEPRPSR YTLRLRYGRV BACU017969/1-665 GDGSGALQRS GSLGKIRDVL RRSSELLVRK LQGTEPRPS- ---------- ENSP00000259708/1-637 GDGSGTLQRS GSLGKIRDVL RRSSELLVRK LQGTEPRPS- ---------- ENSTTRP00000006632/1-636 GDGSGALQRS GSLGKIRDVL RRSSELLVRK LQGTEPRPS- ---------- ENSBTAP00000016955/1-612 GDGSGALQRS GSLGKIRDVL RRSSELLVRK LQGSEPRPS- ---------- 751 800 bmy_00061T0/1-716 GSGNMKRAAS LNYLNQPSAA PLQIVAFREI IAKTKQSPEL GVEVTGSILG BACU017969/1-665 -SGNMKRAAS LNYLNQPSAA PLQV------ ---------- ---------- ENSP00000259708/1-637 -SSNMKRAAS LNYLNQPSAA PLQV------ ---------- ---------- ENSTTRP00000006632/1-636 -SGNMKRAAS LNYLNQPSAA PLQV------ ---------- ---------- ENSBTAP00000016955/1-612 -SSNMKRAAS LNYLNQPSAA PLQV------ ---------- ---------- 801 850 bmy_00061T0/1-716 PERDCSRLPR PQCQQYGPLL KQLTFNPPPQ VCWVPHTALT AFPIAPGSSS BACU017969/1-665 ---------- ---------- ------RAVL MSVLVGEKER ISPVGRGESH ENSP00000259708/1-637 ---------- ---------- ---------- -----SRGLS ASTMDLSSSS ENSTTRP00000006632/1-636 ---------- ---------- ---------- -----SRGLS ASSMDLSSSS ENSBTAP00000016955/1-612 ---------- ---------- ---------- -----SRGLS ASSMDLSSSS 851 900 bmy_00061T0/1-716 PKELLPTTAG RGASRGRRGA GLGGGGGGGG GGGGGARRLG GTGRARLRLG BACU017969/1-665 LE-------- ---------- ---------- ---------- ---------- ENSP00000259708/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006632/1-636 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016955/1-612 ---------- ---------- ---------- ---------- ---------- 901 950 bmy_00061T0/1-716 TPRALTLAAA AAAAPALRCA RPPGPAGERS PRARRAPARP LPRARRDGSR BACU017969/1-665 ---------- ---------- ---------- ---------- ---------- ENSP00000259708/1-637 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006632/1-636 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016955/1-612 ---------- ---------- ---------- ---------- ---------- 951 1000 bmy_00061T0/1-716 ARNPEQPSLA ASAQRPAATA AGR BACU017969/1-665 ---------- ---------- --- ENSP00000259708/1-637 ---------- ---------- --- ENSTTRP00000006632/1-636 ---------- ---------- --- ENSBTAP00000016955/1-612 ---------- ---------- ---