KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:13 2014 Check: 00 .. Name: ENSTTRP00000000948/1-632 Len: 635 Check: 9944 Weight: 1.00 Name: ENSP00000413241/1-632 Len: 635 Check: 719 Weight: 1.00 Name: ENSBTAP00000016988/1-635 Len: 635 Check: 5509 Weight: 1.00 Name: bmy_05767T0/1-318 Len: 635 Check: 5880 Weight: 1.00 Name: BACU008014/1-614 Len: 635 Check: 3097 Weight: 1.00 // 1 50 ENSTTRP00000000948/1-632 MDTLMLNMRN LFEQLVRRME ILSEGNEVQF IQLAKDFEEF RKKWQRTDHE ENSP00000413241/1-632 MDTMMLNVRN LFEQLVRRVE ILSEGNEVQF IQLAKDFEDF RKKWQRTDHE ENSBTAP00000016988/1-635 MDTTMLNMRN LFEQLVRRVE ILSEGNELQF IQLAKDFEDF RKKWQRTDHE bmy_05767T0/1-318 METMMLNMRN LFEQLARRME ILSEGNELQF IQLAKDFEDF RKKWQRTDHE BACU008014/1-614 METMMLNMRN LFEQLARRME ILSEGNELQF IQLAKDFEDF RKKWQRTDHE 51 100 ENSTTRP00000000948/1-632 LGKYKDLLMK VETERSALDV KLKHARNQVD VEIKRRQRAE ADCEKLXXXX ENSP00000413241/1-632 LGKYKDLLMK AETERSALDV KLKHARNQVD VEIKRRQRAE ADCEKLERQI ENSBTAP00000016988/1-635 LGKYKDLLMK AETERSALDV KLKHARNQVD VEIKRRQRAE ADCEKLERQI bmy_05767T0/1-318 LGKYKDLLMK VETERSALDV KLKHARNQVD VEIKRRQRAE ADCEKLERQI BACU008014/1-614 LGKYKDLLMK VETERSALDV KLKHARNQVD VEIKRRQRAE ADCEKLERQI 101 150 ENSTTRP00000000948/1-632 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000413241/1-632 QLIREMLMCD TSGSIQLSEE QKSALAFLNR GQPSSSNAGN KRLSTIDESG ENSBTAP00000016988/1-635 QLIREMLMCD TSGSIQLSEE QKSALAFLNR GQPASGNAGN KRLSTIDESG bmy_05767T0/1-318 QLIREMLMCD TSGSIQLSEE QRSALAFLNR GQPSSGNAGN KRLSTIDESG BACU008014/1-614 QLIREMLMCD TSGSIQLSEE QRSALAFLNR GQPSSGNAGN KRLSTIDESG 151 200 ENSTTRP00000000948/1-632 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000413241/1-632 SILSDISFDK TDESLDWDSS LVKTFKLKKR EKRRSTSRQF VDGPPGPVKK ENSBTAP00000016988/1-635 SILSDISFDK TDESLDWDSS LVKTFKLKKR EKRRSNSRQF VDGPPGPVKK bmy_05767T0/1-318 SILSDISFDK TDESL----- ---------- ---------- ---------- BACU008014/1-614 SILSDISFDK TDESL----- ---------- ---RSSNRQF IDGPPGPVKK 201 250 ENSTTRP00000000948/1-632 XXXXXXXXXX GNESIVAKTT VTVPNDGGPI EAVSTIETVP YWTRSRRKT- ENSP00000413241/1-632 TRSIGSAVDQ GNESIVAKTT VTVPNDGGPI EAVSTIETVP YWTRSRRKT- ENSBTAP00000016988/1-635 TRSIGSTADQ GNESIVAKTT VTVPNDGGPI EAVSTIETVP YWTRSRRKTG bmy_05767T0/1-318 ---------- GNESIVAKTT VTVPNDGGPI EAVSTIETVP YWTRSRRKT- BACU008014/1-614 TRSIGSTADQ GNESIVAKTT VTVPSDGGPI EAVSTIETVP YWTRSRRKT- 251 300 ENSTTRP00000000948/1-632 --GTLQPWNS DSTLSSRQLE PKTDTDGSST PQSNGGMRLH DFVSKTVIKP ENSP00000413241/1-632 --GTLQPWNS DSTLNSRQLE PRTETDSVGT PQSNGGMRLH DFVSKTVIKP ENSBTAP00000016988/1-635 PLGTLQPWNS DSTLSSRQPE PKTETDGSST PQSNGGMRLH DFVSKTVIKP bmy_05767T0/1-318 --GSLQPWNS DSTLSSRQPE PKTDTDGSNT PQSNGGMRLH DFVSKT---- BACU008014/1-614 --GSLQPWNS DSTLSSRQPE PKTDTDGSNT PQSNGGMRLH DFVSKTVIKP 301 350 ENSTTRP00000000948/1-632 ESCVPCGKRI KFGKLSLKCR DCRVVSHPEC RDRCPLPCIP TLIGTPVKIG ENSP00000413241/1-632 ESCVPCGKRI KFGKLSLKCR DCRVVSHPEC RDRCPLPCIP TLIGTPVKIG ENSBTAP00000016988/1-635 ESCVPCGKRI KFGKPSLKCR DCRVVSHPEC RDRCPLPCIP TLIGTPVKIG bmy_05767T0/1-318 ---------- ---------- ---------- ---------- ---------- BACU008014/1-614 ESCVPCGKRI KFGKLSLKCR DCRVVSHPEC RDRCPLPCIP TLIGTPVKIG 351 400 ENSTTRP00000000948/1-632 EGMLADYVSQ TSPMIPSIVV HCVNEIEQRG LTETGLYRIS GCDRTVKELK ENSP00000413241/1-632 EGMLADFVSQ TSPMIPSIVV HCVNEIEQRG LTETGLYRIS GCDRTVKELK ENSBTAP00000016988/1-635 DGMLADYVSQ TSPMIPSIVV HCVNEIEQRG LTETGLYRIS GCDRTVKELK bmy_05767T0/1-318 -GMLADYVSQ TSPMIPSIVV HCVNEIEQRG LTETGLYRIS GCDRTVKELK BACU008014/1-614 EGMLADYVSQ TSPMIPSIVV HCVNEIEQRG LTETGLYRIS GCDRTVKELK 401 450 ENSTTRP00000000948/1-632 EKFLRVKTVP LLSKVDDIHA ICSLLKDFLR NLKEPLLTFR LNKTFMEAAE ENSP00000413241/1-632 EKFLRVKTVP LLSKVDDIHA ICSLLKDFLR NLKEPLLTFR LNRAFMEAAE ENSBTAP00000016988/1-635 EKFLRVKTVP LLSKVDDIHA ICSLLKDFLR NLKEPLLTFR LNKTFMDAAE bmy_05767T0/1-318 EKFLRVKTVP LLSKVDDIHA I--------- ---------- ---------- BACU008014/1-614 EKFLRVKTVP LLSKVDDIHA ICSLLKDFLR NLKEPLLTFR LNKTFMEAAE 451 500 ENSTTRP00000000948/1-632 ITDEDNSIAA MYQAVGELPQ ANRDTLAFLM IHLQRVAQSP STKMDVANLA ENSP00000413241/1-632 ITDEDNSIAA MYQAVGELPQ ANRDTLAFLM IHLQRVAQSP HTKMDVANLA ENSBTAP00000016988/1-635 ITDDDNSIAA MYQAVGELPQ ANRDTLAFLM IHLQRVAQSP NTKMDVANLA bmy_05767T0/1-318 ---------- ---------- ---------- ---------- ---------- BACU008014/1-614 ITDEDNSIAA MYQAVGELPQ ANRDTLAFLM IHLQRVAQSP STKMDVANLA 501 550 ENSTTRP00000000948/1-632 KVFGPTIVAH AVPNPDPVIM LQDIKRQPKV VERLLSLPLE YWSQFMMVEQ ENSP00000413241/1-632 KVFGPTIVAH AVPNPDPVTM LQDIKRQPKV VERLLSLPLE YWSQFMMVEQ ENSBTAP00000016988/1-635 KVFGPTIVGH AVSNPDPVTL LQDIKHQPKV VERLLSLPLE YWSQFMMVEQ bmy_05767T0/1-318 ---------- ---------- ---------- ---------- ---------- BACU008014/1-614 KVFGPTIVAH AVPNPDPVIM LQDIKRQPKV VERLLSLPLE YWSQFMMVEQ 551 600 ENSTTRP00000000948/1-632 ENIDPMHVIE NSNAFSTPQT PDVKVSLLGP VTTPEHQFLK TPSSSSLSQR ENSP00000413241/1-632 ENIDPLHVIE NSNAFSTPQT PDIKVSLLGP VTTPEHQLLK TPSSSSLSQR ENSBTAP00000016988/1-635 ENIDPMHVIE NANAFSTPQT PDVKVSLLGP VTTPEHQLLK TPSSSSLSQR bmy_05767T0/1-318 ---------- ---------- ---------- ---------- ---------- BACU008014/1-614 ENIDPMHVIE NSNAFSTPQT PDVKVSLLGP LTTPEHQLLK TPSSSSLSKR 601 650 ENSTTRP00000000948/1-632 VRSTLTKNTP RFGSKSKSAT NLGRQGNFFA SPMLK ENSP00000413241/1-632 VRSTLTKNTP RFGSKSKSAT NLGRQGNFFA SPMLK ENSBTAP00000016988/1-635 VRSTLTRNTP RFGSKSKSAT NLGRQGNFFA SPMLK bmy_05767T0/1-318 ---------- ---------- ---------- ----- BACU008014/1-614 VRSTFTKNTP RFGSKSKSAT NLGRQGNFFA SPMLK