KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:14 2014 Check: 00 .. Name: bmy_05749T0/1-116 Len: 221 Check: 6428 Weight: 1.00 Name: ENSBTAP00000016997/1-221 Len: 221 Check: 808 Weight: 1.00 Name: ENSP00000229390/1-221 Len: 221 Check: 809 Weight: 1.00 Name: ENSTTRP00000000136/1-197 Len: 221 Check: 1355 Weight: 1.00 Name: BACU010543/1-162 Len: 221 Check: 2223 Weight: 1.00 // 1 50 bmy_05749T0/1-116 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016997/1-221 MSGWADERGG EGDGRIYVGN LPSDVREKDL EDLFYKYGRI SEIELKNRHG ENSP00000229390/1-221 MSGWADERGG EGDGRIYVGN LPTDVREKDL EDLFYKYGRI REIELKNRHG ENSTTRP00000000136/1-197 ---------- ---------- ----VREKDL EDLFYKYGRI RDIELKNRHG BACU010543/1-162 ---------- ---------- ---------- ---------- ---MLK---- 51 100 bmy_05749T0/1-116 ---------- ---------- ---------- ---------- ----MWP--- ENSBTAP00000016997/1-221 LVPFAFVRFE DPRDAEDAIY GRNGYDYGQC RLRVEFPRTY GGRGGWPRGG ENSP00000229390/1-221 LVPFAFVRFE DPRDAEDAIY GRNGYDYGQC RLRVEFPRTY GGRGGWPRGG ENSTTRP00000000136/1-197 LVPFAFVRFE DPRDAEDAIY GRNGYDYGQC RLRVEFPRTY GGRGGWPRGG BACU010543/1-162 ---------- --RDAEDAIY GRNGYDYGQC RLRVEFPRTY GGRGGWPRGG 101 150 bmy_05749T0/1-116 --------LL LCSLCLGLPP SGSWQDLKDH MREAGDVCYA DVQKDGMGMV ENSBTAP00000016997/1-221 RSGPPTRRSD FRVLVSGLPP SGSWQDLKDH MREAGDVCYA DVQKDGMGMV ENSP00000229390/1-221 RNGPPTRRSD FRVLVSGLPP SGSWQDLKDH MREAGDVCYA DVQKDGVGMV ENSTTRP00000000136/1-197 RNGPPTRRSD FRVLVSGLPP SGSWQDLKDH MREAGDVCYA DVQKDGMGMV BACU010543/1-162 RNGPPTRRSD FRVLVSGLPP SGSWQDLKDH MREAGDVCYA DVQKDGMGMV 151 200 bmy_05749T0/1-116 EYLRKEDMEY ALRKLDDTKF RSHEGETSYI RVYPERSTSY GYSRSRSGSR ENSBTAP00000016997/1-221 EYLRKEDMEY ALRKLDETKF RSHEGETSYI RVYPERSTSY GYSRSRSGSR ENSP00000229390/1-221 EYLRKEDMEY ALRKLDDTKF RSHEGETSYI RVYPERSTSY GYSRSRSGSR ENSTTRP00000000136/1-197 EYLRKEDMEY ALRKLDDTKF RSHEGETSYI RVYPERSTSY GYSRSRSGSR BACU010543/1-162 EYLRKEDMEY ALRKLDDTKF RSHEGETSYI RVYPERSTSY GYSRSRSGSR 201 250 bmy_05749T0/1-116 GRDSPYQSRG SPHYFSPFRP Y ENSBTAP00000016997/1-221 GRDSPYQSRG SPHYFSPFRP Y ENSP00000229390/1-221 GRDSPYQSRG SPHYFSPFRP Y ENSTTRP00000000136/1-197 GRDSPYQSRG SPHYFSPFRP Y BACU010543/1-162 GRDSPYQSRG SPHYFSPFRP Y