KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:15 2014 Check: 00 .. Name: ENSTTRP00000003123/1-294 Len: 384 Check: 989 Weight: 1.00 Name: ENSP00000474090/1-374 Len: 384 Check: 9839 Weight: 1.00 Name: ENSBTAP00000017006/1-320 Len: 384 Check: 6662 Weight: 1.00 Name: bmy_10686T0/1-313 Len: 384 Check: 9871 Weight: 1.00 Name: BACU010059/1-299 Len: 384 Check: 6941 Weight: 1.00 // 1 50 ENSTTRP00000003123/1-294 ---------- ---------- ---------- ---------- ---------- ENSP00000474090/1-374 MLAPGCELDP DQEVVRTRPE DVPASPSTST MIVSVLRPPS HASCTACGTV ENSBTAP00000017006/1-320 ---------- ---------- ---------- ---------- ---------- bmy_10686T0/1-313 ---------- ---------- ----MPDWNW AGVVLIIPNN KLRDRAWNTK BACU010059/1-299 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000003123/1-294 -------MTS SFPASNTSKR SERNTYVG-- ----XXXXXX XXXXXXXXXX ENSP00000474090/1-374 TFHIVERMAS VIPASNRSMR SDRNTYVG-- ----KRFVHV KNPYLDLMDE ENSBTAP00000017006/1-320 -------MAS VLPASNTSMR SDRNTYVG-- ----KSFVHV KNPYLDSMDE bmy_10686T0/1-313 YKWEGPSSAD QDGPKEASME FEGFVYNDYH QEEEKGFVHV KNPYLDSMDE BACU010059/1-299 ---------- ---------- ---------- ----KGFVHV KNPYLDSMDE 101 150 ENSTTRP00000003123/1-294 XXXXXXXXXX XXXXXXXXXX XXXFVCVGGS PNRMKAFALF MHKELRLEDS ENSP00000474090/1-374 DILYHLDLGT KTHNLPAMFG DVKFVCVGGS PNRMKAFALF MHKELGFEEA ENSBTAP00000017006/1-320 DVLYHLDLGT KTHNLPEMFG DVKFVCVGGS PNRMKAFALF MHKELRLTDS bmy_10686T0/1-313 DVLYHLDLGT KTHNLPEMFG DVKFVCVGGS PNRMKAFALF MHKELRLEDS BACU010059/1-299 DVLYHLDLGT KTHNLPEMFG DVKFVCVGGS PNRMKAFALF MHKELRLEDS 151 200 ENSTTRP00000003123/1-294 EEDVKDICAG TDRYCMYKIG PVLSISHGMG IPSISIMLHE LIKLLYHARC ENSP00000474090/1-374 EEDIKDICAG TDRYCMYKTG PVLAISHGMG IPSISIMLHE LIKLLHHARC ENSBTAP00000017006/1-320 EEDIKDICAG TDSYCMYKIG PVLSISHGMG IPSISIMLHE LIKLLYHARC bmy_10686T0/1-313 EEDVKDICAG TDRYCMYKIG PVLSISHGMG IPSISIMLHE LIKLLYHARC BACU010059/1-299 EEDIKDICAG TDRYCMYKIG PVLSISHGMG IPSISIMLHE LIKLLYHARC 201 250 ENSTTRP00000003123/1-294 CDVTIIRIGT SGGIGIAPGS VVITDRAVDS FFKPRFEQVI LDNVVTRSTE ENSP00000474090/1-374 CDVTIIRIGT SGGIGIAPGT VVITDIAVDS FFKPRFEQVI LDNIVTRSTE ENSBTAP00000017006/1-320 SDVIIIRIGT SGGIGIAPGS VVITDEAVDS FFKPRFEQVI LDNIVTRSTE bmy_10686T0/1-313 CDVTIIRIGT SGGIGIAPGS VVITDRAVDS FFKPRFEQVI LDNVVTRSTE BACU010059/1-299 CDVTIIRIGT SGGIGIAPGS VVITDRAVDS FFKPQFEQVI LDNVVTRSTE 251 300 ENSTTRP00000003123/1-294 LDKELAEELF NCSKEIPDFP TLIGHTMCTY DFYEXXXXXX XXXXSSFSRE ENSP00000474090/1-374 LDKELSEELF NCSKEIPNFP TLVGHTMCTY DFYEGQGRLD GALC-SFSRE ENSBTAP00000017006/1-320 LDKELAEEIF NCSKEISNFP TLIGHTMCTY DFYEGQGRLD GALC-SFSRE bmy_10686T0/1-313 LDKELAEELF NCSKEIPDFP TLIGHTMCTY DFYEGQGRLD GALC-SFSRE BACU010059/1-299 LDKELAEELF NCSKEIPDFP TLIGHTMCTY DFYEGQGRLD GALC-SFSRE 301 350 ENSTTRP00000003123/1-294 R-LDYLKRAY NAGIRNIEME STVFAAMCRL CGLKAAVVCV TLLNRLECDQ ENSP00000474090/1-374 KKLDYLKRAF KAGVRNIEME STVFAAMCGL CGLKAAVVCV TLLDRLDCDQ ENSBTAP00000017006/1-320 KGLDYLKRAY NAGIRNIEME STVFAAMCRL CGLKAAVVCV TLLNRLECDQ bmy_10686T0/1-313 KGLDYLKRAY NAGIRNIEME STVFAAMCRL CGLKE----- ---------- BACU010059/1-299 KGLDYLKRAY NAGIRNIEME STVFAAMCRL CGLKAAVVCV TLLNRLECDQ 351 400 ENSTTRP00000003123/1-294 INSPHDVL-- ---------- ---------- ---- ENSP00000474090/1-374 INLPHDVLVE YQQRPQLLIS NFIRRRLGLC D--- ENSBTAP00000017006/1-320 INSPHDVLVE YQKRPQLLIS KFIKQRLGLC DQTS bmy_10686T0/1-313 -KSP------ ---------- ---------- ---- BACU010059/1-299 INSPHDVLVE YQKRPQLLIS RFIKRRLGLR DLTS