KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:17 2014 Check: 00 .. Name: bmy_16750T0/1-439 Len: 439 Check: 2800 Weight: 1.00 Name: BACU017281/1-308 Len: 439 Check: 3391 Weight: 1.00 Name: ENSP00000338562/1-289 Len: 439 Check: 2628 Weight: 1.00 Name: ENSTTRP00000008925/1-289 Len: 439 Check: 4233 Weight: 1.00 Name: ENSBTAP00000017032/1-279 Len: 439 Check: 5560 Weight: 1.00 // 1 50 bmy_16750T0/1-439 MLLKVKQYEE AKNIVVLALM EKAPQSDSGE HELFTRRKGC RKLRIELFLF BACU017281/1-308 MKDRLEQLKA ---------- KQLTQDDDAD ---------- ---------- ENSP00000338562/1-289 MKDRLEQLKA ---------- KQLTQDDDTD ---------- ---------- ENSTTRP00000008925/1-289 MKDRLEQLKA ---------- KQLTQDDDAD ---------- ---------- ENSBTAP00000017032/1-279 ---------- ---------- KQLTQDDDTD ---------- ---------- 51 100 bmy_16750T0/1-439 VDCGRVDVPL IVEVRQVDVV GFEVSLACAA PCICTGTAAE AVVPGQPVPL BACU017281/1-308 ------EVEI AVD------- ---------- ---------- ---------- ENSP00000338562/1-289 ------AVEI AID------- ---------- ---------- ---------- ENSTTRP00000008925/1-289 ------EVEI AID------- ---------- ---------- ---------- ENSBTAP00000017032/1-279 ------EVEI AVD------- ---------- ---------- ---------- 101 150 bmy_16750T0/1-439 KREPRLNLML RQQHPGTIEE TRFNIDKISE HVEEAKKLYS IILSAPIPEP BACU017281/1-308 ------NTAF MDEFFSEIEE TRFNIDKISE HVEEAKKLYS IILSAPIPEP ENSP00000338562/1-289 ------NTAF MDEFFSEIEE TRLNIDKISE HVEEAKKLYS IILSAPIPEP ENSTTRP00000008925/1-289 ------NTAF MDEFFSEIEE TRLNIDKISE HVEEAKKLYS VILSAPIPEP ENSBTAP00000017032/1-279 ------NTAF MDEFFSEIEE TRVNIDKISE HVEEAKRLYS VILSAPIPEP 151 200 bmy_16750T0/1-439 KTKDNLEQLT TEIKKRANNV RNKLKSMERH IEEDEVRSSA DLRIRKSQHS BACU017281/1-308 KTKDDLEQLT TEIKKRANNV RNKLKSMERH IEDDEVRSSA DLRIRKSQHS ENSP00000338562/1-289 KTKDDLEQLT TEIKKRANNV RNKLKSMEKH IEEDEVRSSA DLRIRKSQHS ENSTTRP00000008925/1-289 KTKDDLEQLT TEIKKRANNV RNKLKSMERC IEEDEVRSSA DLRIRKSQHS ENSBTAP00000017032/1-279 KTKDDLEQLT TEIKKRANNV RNKLKSMERH IEEDEVQSSA DLRIRKSQHS 201 250 bmy_16750T0/1-439 VLSRKFVEVM TKYNEAQMDF RERSKGRIQR QLEITGRKTT DEELEEMLES BACU017281/1-308 VLSRKFVEVM TKYNEAQVDF RERSKGRIQR QLEITGRKTT DEELEEMLES ENSP00000338562/1-289 VLSRKFVEVM TKYNEAQVDF RERSKGRIQR QLEITGKKTT DEELEEMLES ENSTTRP00000008925/1-289 VLSRKFVEVM TKYNEAQVDF RERSKGRIQR QLEITGRKTT DGELEEMLES ENSBTAP00000017032/1-279 VLSRKFVEVM TKYNEAQVDF RERSKGRIQR QLEITGKKTT DEELEEMLES 251 300 bmy_16750T0/1-439 GNPAIFTSGI IDSQISKQAL SEIEGRHKDI VRLESSIKEL HDMFMDIAVL BACU017281/1-308 GNPAIFTSGI IDSQISKQAL SEIEGRHKDI VRLESSIKEL HDMFMDIAVL ENSP00000338562/1-289 GNPAIFTSGI IDSQISKQAL SEIEGRHKDI VRLESSIKEL HDMFMDIAML ENSTTRP00000008925/1-289 GNPAIFTSGI IDSQISKQAL SEIEGRHKDI VRLESSIKEL HDMFVDIAML ENSBTAP00000017032/1-279 GNPAIFTSGI IDSQISKQAL SEIEGRHKDI VRLESSIKEL HDMFMDIAML 301 350 bmy_16750T0/1-439 VENQGEMLDN IELNVMHTVD HVEKAREETK RAVKYQGQAR KGAMIDRIEN BACU017281/1-308 VENQGEMLDN IELNVMHTVD HVEKAREETK RAVKYQGQAR KGAMIDRIEN ENSP00000338562/1-289 VENQGEMLDN IELNVMHTVD HVEKARDETK KAVKYQSQAR K--------- ENSTTRP00000008925/1-289 VENQGEMLDN IELNVMHTVD HVEKAREETK RAVKYQGQAR K--------- ENSBTAP00000017032/1-279 VENQGEMLDN IELNVMHTVD HVEKAREETK RAVKYQGQAR K--------- 351 400 bmy_16750T0/1-439 NMDQSVGFVE RAVADTKKAV KYQSEARRKL IIIIVVVVVL LGILALVIGL BACU017281/1-308 NMDQSVGFVE RAVADTKKAV KYQSEARRGP VFSKVVV--- ---------- ENSP00000338562/1-289 ---------- ---------- --------KL IIIIVLVVVL LGILALIIGL ENSTTRP00000008925/1-289 ---------- ---------- --------KL IIIIVVVVVL LGILALVIGL ENSBTAP00000017032/1-279 ---------- ---------- --------KL VIIIVIVVVL LGILALIIGL 401 450 bmy_16750T0/1-439 SVGLNPHRWI FTWHFQFFLH LCGAIPSPLQ IPQKLFFPL BACU017281/1-308 ---------- ---------- ---------- --------- ENSP00000338562/1-289 SVGLN----- ---------- ---------- --------- ENSTTRP00000008925/1-289 SVGLK----- ---------- ---------- --------- ENSBTAP00000017032/1-279 SVGLK----- ---------- ---------- ---------