KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:18 2014 Check: 00 .. Name: ENSP00000334003/1-942 Len: 944 Check: 4083 Weight: 1.00 Name: ENSBTAP00000017038/1-933 Len: 944 Check: 4164 Weight: 1.00 Name: bmy_09259T0/1-930 Len: 944 Check: 1307 Weight: 1.00 Name: BACU004189/1-840 Len: 944 Check: 8197 Weight: 1.00 Name: ENSTTRP00000012308/1-931 Len: 944 Check: 1477 Weight: 1.00 // 1 50 ENSP00000334003/1-942 -MASVASCDS RPSSDELPGD PSSQEEDEDY DFEDRVSDSG SYSSASSDYD ENSBTAP00000017038/1-933 -MASLPLCGS VRSPEGLPGD PSSQEDRQDY DPEDPVSGSG SYSPTSTDSN bmy_09259T0/1-930 MMASPALCGS RQSPEGLPGD PSSQEEDADC DPEDPVSDSG SYSSTSTDYD BACU004189/1-840 MMASPALCGS RQSPEGLPGD PSSQEEDADC DPEDPVSDSG SYSSTSTDYD ENSTTRP00000012308/1-931 -MASPALCGS RQSPEGLPGD PSSQEEDEDC DPEDPVSDSG SYSSTSTDYD 51 100 ENSP00000334003/1-942 DLEPEWLDSV QKNGELFYLE LSEDEEESLL PETPTVNHVR FSENEIII-E ENSBTAP00000017038/1-933 DLEPEWLDSV QKNGELFYLE LSEDEEESLL PETPTVNHVR FSENEIIIEE bmy_09259T0/1-930 DLEPEWLDSV QKNGELFYLE LSEDEEESLL PETPTVNHVR FSENEIIIEE BACU004189/1-840 DLEPEWLDSV QKNGELFYLE LSEDEEESLL PETPTVNHVR FSENEIIIEE ENSTTRP00000012308/1-931 DLEPEWLDSV QKNGELFYLE LSEDEEESLL PETPTVNHVR FSENEIIIEE 101 150 ENSP00000334003/1-942 DDYKERKKYE PKLKQFTKIL RRKRLLPKRC NKKNSNDNGP VSILKHQSNQ ENSBTAP00000017038/1-933 DDYREGKKYE PKLKRFTKIL KSKKLLPKRY NKKNSNASGP VSILKHQSNQ bmy_09259T0/1-930 DDYKEGKKYE PKLKQFTKIL KSKKLLPKRY NKKNSNASGP VSILKHQSNQ BACU004189/1-840 DDYKEGKKYE PKLKRFTKIL KSKKLLPKRY NKKNSNASGP VSILKHQSNQ ENSTTRP00000012308/1-931 DDYKEGKKYE PKLRRFTKIL KSKKLLPKRY NKKNSNASGP VSILKHQSNQ 151 200 ENSP00000334003/1-942 KTGVIVQQRY KDVNVYVNPK KLTVIKAKEQ LKLLEVLVGI IHQTKWSWRR ENSBTAP00000017038/1-933 KMGVIVQQRH KDVNIYVNPK KLTVTKAKEQ LKLLEVLVGI IHQTKWSWRR bmy_09259T0/1-930 KTGVVVQQRY KDVNVYVNPK KLTXTKAKEQ LKLLEVLIGI IHQTKWSWRR BACU004189/1-840 KTGVVVQQRY KDVNVYVNPK KLTVTKAKEQ LKLLEVLIGI IHQTKWSWRR ENSTTRP00000012308/1-931 KTGVVVQQRY KDVNVYVNPK KLTVTKAKEQ LKLLEVLIGI IHQTKWSWRR 201 250 ENSP00000334003/1-942 TGKQGDGERL VVHGLLPGGS AMKSGQVLIG DVLVAVNDVD VTTENIERVL ENSBTAP00000017038/1-933 TGKQGGGERL VVHGLLPGGS AMKSGQVLIG DVLVAVNDVE VTSENIERVL bmy_09259T0/1-930 SGKQGXGEKL VVHGLLPGGS AMKSGQILID Q--KSYSKLG MCSYPFARMD BACU004189/1-840 SGKQGGGEKL VVHGLLPGGS AMKSGQILIG DVLVAVNDVD VTSENIERVL ENSTTRP00000012308/1-931 SGKQGSGEKL VVHGLLPGGS AMKSGQILIG DVLVAVNDVD VTSENIERVL 251 300 ENSP00000334003/1-942 SCIPGPMQVK LTFENAYDVK RETSHPRQKK TQSNTSDLVK LLWGEEVEGI ENSBTAP00000017038/1-933 SCIPGPMQVK LTFENAYAMK KETTQPRQKK AQLNTSDLVK LLWGEEVEGI bmy_09259T0/1-930 DF---NVTVK LTFENAHAVK KQTTQPRQKK AQSNTSDLIK LPWGEEVKGT BACU004189/1-840 SCIPGPMQVK LTFENAHAVK KQTTQPRQKK AQSNTSDLIK LPWGEEVKGT ENSTTRP00000012308/1-931 SCIPGPMQVK LTFENAYAVK KQTTQPRQKK AQSNTSDLIK LPWGDEDKDT 301 350 ENSP00000334003/1-942 QQSGLNTPHI IMYLTLQLDS ETSKEEQEIL YHYPMSEASQ KLKSVRGIFL ENSBTAP00000017038/1-933 QQNILNTPHI VMYLTLQLDS ETSKEEQEIL YHYPVSEASQ KLQSVRGIFL bmy_09259T0/1-930 QQNILNTPHI VMYLTLQLDS ETSKEEQEIL YHYPVSDASQ KLKSVRGIFL BACU004189/1-840 QQNILNTPHI VMYLTLQLDS ETSKEEQEIL YHYPVSDASQ KLKSVRGIFL ENSTTRP00000012308/1-931 QQNILNTPHI VMYLTLQLDS ETSKEEQEIL YHYPVSDASQ KLKSVRGIFL 351 400 ENSP00000334003/1-942 TLCDMLENVT GTQVTSSSLL LNGKQIHVAY WKESDKLLLI GLPAEEVPLP ENSBTAP00000017038/1-933 TLCDMLENVT GTQVTSSSLL LNRKQIHIAY WKETDKLLLI GLPAEEVPLP bmy_09259T0/1-930 TLCDMLENVT GTQVTSSSLL LNGKQIHVAY WKESDKLLLI GLPAEEVPLP BACU004189/1-840 TLCDMLENVT GTQVTSSSLL LNGKQIHVAY WKESDKLLLI GLPAEEVPLP ENSTTRP00000012308/1-931 TLCDMLENVT GTQVTSSSLL LNGKQIHVAY WKESDKLLLI GLPAEEVPLP 401 450 ENSP00000334003/1-942 RLRNMIENVI QTLKFMYGSL DSAFCQIENV PRLDHFFNLF FQRALQPAKL ENSBTAP00000017038/1-933 QLRNMIEDVA QTLKFMYGSL DSAFCQVENV PRLDHFFSLF FQRALQPTKL bmy_09259T0/1-930 QLRNMIEDVA QTLKFMYGSL DSAFCQVENV PRLDHFFSLX FQRALQPAKL BACU004189/1-840 QLRNMIEDVA QTLKFMYGSL DSAFCQVENV PRLDHFFSLF FQRALQPAKL ENSTTRP00000012308/1-931 QLRNMIEDVA QTLKFMYGSL DSAFCQVENV PRLDHFFSLF FQRALQPAKL 451 500 ENSP00000334003/1-942 HSSASPSAQQ YDASSAVLLD NLPGVRWLTL PLEIKMELDM ALSDLEAADF ENSBTAP00000017038/1-933 HSSASPSTQQ YDASSAVLLD NLPGVRWLTL PQEIKLELDT ALSDLEAADF bmy_09259T0/1-930 HSSACPSTQQ YDVSSAVLLD NLPGVRWLTL PQEIKAELDT ALSDLEAADF BACU004189/1-840 HSSACPSTQQ YDVSSAVLLD NLPGVRWLTL PQEIKVELDT ALSDLEAADF ENSTTRP00000012308/1-931 HSSASPSTQQ YDASSAVLLD NLPGVRWLTL PQDIKVELDT ALSDLEAADF 501 550 ENSP00000334003/1-942 AELSEDYYDM RRLYTILGSS LFYKGYLICS HLPKDDLIDI AVYCRHYCLL ENSBTAP00000017038/1-933 AELSEDYYDM RRLYTILGSS LFYKGYLICS HLPKDDLIDI AVYCRHYCLL bmy_09259T0/1-930 AELSEDYYDM RRLYTILGSS LFYKGYLICS HLPKDDLIDI AVYCRHYCLL BACU004189/1-840 AE-------- ---------- ---------- ---------- ---------- ENSTTRP00000012308/1-931 AELSEDYYDM RRLYTILGSS LFYKGYLICS HLPKDDLIDI AVYCRHYCLL 551 600 ENSP00000334003/1-942 PLAAKQRIGQ LIIWREVFPQ HHLRPLADSS TEVFPEPEGR YFLLVVGLKH ENSBTAP00000017038/1-933 PLAAKQRIGQ LVIWREVFPR HHLQPSADSN TEVFQEPEGR YFLLIVGLRH bmy_09259T0/1-930 PLAAKQRIGQ LVIWREVFPR HHLQPSTDSN TEVFQESEGR YFLLIVGLRH BACU004189/1-840 ---------- ---------- ---------- ---------- -------LRH ENSTTRP00000012308/1-931 PLAAKQRIGQ LVIWREVFPR HHLQPSADSN TEVFQEPEGR YFLLIVGLRH 601 650 ENSP00000334003/1-942 YMLCVLLEAG GCASKAIGSP GPDCVYVDQV KTTLHQLDGV DSRIDERLAS ENSBTAP00000017038/1-933 YMLCVLLEAG GCASRAIGNP GPDCIYVDQV KTTLHQLEGV DSRINERLAS bmy_09259T0/1-930 YMLCVLLEAG GCASKAVGNP GPDCIYVDQV KTTLHQLEGV DSRINERLAS BACU004189/1-840 YMLCVLLEAG GCASKAVGNP GPDCIYVDQV KTTLHQLEGL DSRINERLAS ENSTTRP00000012308/1-931 YMLCVLLEAG GCASKAVGNP GPDCIYVDQV KTTLHQLEGI DSRINERLAS 651 700 ENSP00000334003/1-942 SPVPCLSCAD WFLTGSREKT DSLTTSPILS RLQGTSKVAT SPTCRRTLFG ENSBTAP00000017038/1-933 SPTPCLSCAD WFLAGSHEKL DNLTTSPILS RLHGASRVAT SPTCRRTLFS bmy_09259T0/1-930 SATPCLSCAD WFLAGSHEKL DNLTTSPILS RLQGTSKVAT SPTCRRTLFG BACU004189/1-840 SATPCLSCAD WFLAGSHEKL DHLTTSPILS RLQGTSKVAT SPTCRRTLFG ENSTTRP00000012308/1-931 SATPCLSCAD WFLAGSHEKL DNLTTSPILS RLQGTSKVAT SPTCRRALFG 701 750 ENSP00000334003/1-942 DYSLKTRKPS PSCSSGGSDN GCEGGEDDGF SPHTTPDAVR KQRESQGSDG ENSBTAP00000017038/1-933 DYSLKTRKPS PS-RSGGPDS GLE-GEGVGL SPHTT----- ---ESQGSHG bmy_09259T0/1-930 DYSLKTRKPS PS-RSGGSDS GCEGGEGVGL SPHTA----- ---ASQGSDG BACU004189/1-840 DYSLKTRKPS PS-RSGGSDS GCEGGEGVGL SPHTA----- ---ASQGSDG ENSTTRP00000012308/1-931 DYSLKTRKPS PS-RSGGSDS GCEGGEGVGL SPHTT----- ---ASQGSDG 751 800 ENSP00000334003/1-942 LEESGTLLKV TKKKSTLPNP FHLGNLKKDL PEKELEIYNT VKLTSGPENT ENSBTAP00000017038/1-933 SEETGALLKV TKKKSALPNP FHLGNLKKDL SEKELDIYNT VKLTSGPENT bmy_09259T0/1-930 SEESGALLKV TKKKSTLPNP FHLGNLKKDL SEKELDIYNT MKLTSGPENT BACU004189/1-840 SEESGALLKV TKKKSALPNP FHLGNLKKDL SEKELDKYNT MKLTSGPENT ENSTTRP00000012308/1-931 SEESGALLKV TKKKSTLPNP FHSGNLKKDL SEKELDIYNT MKLTSGPENT 801 850 ENSP00000334003/1-942 LFHYVALETV QGIFITPTLE EVAQLSGSIH PQLIKNFHQC CLSIRAVFQQ ENSBTAP00000017038/1-933 LFHYVALETV QGIFITPTHE EVAQLSGSIH PQLIKNFHQC CLSIRAVFQQ bmy_09259T0/1-930 LFHYVALETV QGIFIAPTHE EVGQLSGSIH PQLIKNFHQC CLSIRAVFQQ BACU004189/1-840 LFHYVALETV QGIFITPTHE EVAQLSGSIH PQLIKNFHQC CLSIRAVFQQ ENSTTRP00000012308/1-931 LFHYVALETV QGIFITPTHE EVAQLSGSIH PQLIKNFHQC CLSIRAVFQQ 851 900 ENSP00000334003/1-942 TLVEEKKKGL NSGDHSDSAK SVSSLNPVKE HGVLFECSPG NWTDQKKAPP ENSBTAP00000017038/1-933 TVAKEKKKAL NGKDHSGSTN SVSSLNPVKE HGVLFECSPE NWTDQRKAPP bmy_09259T0/1-930 TLVEEKKKAL NGGDHSGSTN SVSSLNPVKE HGVLFECSPE NWTDQRKTPP BACU004189/1-840 TLVEEKKKAL NGGDHSGSTN SVTSLNPVKE HGVFIECSPE NWTDQRKTPP ENSTTRP00000012308/1-931 TLVEEKKKAL NGGDHSGSTN SVSSLNPVKE HGVLFECSPE NWTDQRKTPP 901 950 ENSP00000334003/1-942 VMAYWVVGRL FLHPKPQELY VCFHDSVTEI AIEIAFKLFF GLTL ENSBTAP00000017038/1-933 VMAYWVVGRL FLHPKLQELY VCFHDSVTEI AIEMAFKLFF GLTL bmy_09259T0/1-930 VMAYWVVGRL FLHPRLQELY VCFHDSVTEI AIEMAFKLFF GLTL BACU004189/1-840 VMAYWVVGRL FLHPRLQELY VCFHDSVTEI AIEMAFKLFF GLTL ENSTTRP00000012308/1-931 VMAYWVVGRL F-HPR-QELY VCFHDSVTEI AIEMA-KLFF GLTL