KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:19 2014 Check: 00 .. Name: ENSP00000221847/1-229 Len: 256 Check: 4684 Weight: 1.00 Name: ENSBTAP00000017046/1-232 Len: 256 Check: 3612 Weight: 1.00 Name: BACU002613/1-228 Len: 256 Check: 2803 Weight: 1.00 Name: bmy_15836T0/1-237 Len: 256 Check: 3097 Weight: 1.00 Name: ENSTTRP00000001599/1-205 Len: 256 Check: 1764 Weight: 1.00 // 1 50 ENSP00000221847/1-229 ------MTPQ LLLALVL--W ASC--PPCSG RK-------- --------GP ENSBTAP00000017046/1-232 ------MALR LVLAFAVSLW LGC--SFCRE RE-------- --------GH BACU002613/1-228 ------MAPR LVLVLTLTSW VGC--SLCCG RE-------- ---------- bmy_15836T0/1-237 MYSFISQTLI RLLKMCAQHW LAVRWGPSHG RALTVPGESE ADALPLSPGP ENSTTRP00000001599/1-205 ---------- ---------- ---------- ---------- ---------P 51 100 ENSP00000221847/1-229 PAALTLPRVQ CRASRYPIAV DCSWTLPPAP -NSTSPVSFI ATYRLGMAAR ENSBTAP00000017046/1-232 PVASSQPRVR CQASRYPVAV DCSWTLPPTP PNSTRPTSFI ATYRLGVAAH BACU002613/1-228 -AAPTQPRVR CQASRYPIAV DCSWTLPPAP -NSSRPTSFI ATYRLGVAAH bmy_15836T0/1-237 PAAPTQPRVR CQASRYPIAV DCSWTLPPAP -DSSRPTSFI ATYRLGVAAH ENSTTRP00000001599/1-205 PAAVTQPRVQ CQASRYPIAV DCSWTLPPAP -NSSRPTSFI ATYRLGVAAH 101 150 ENSP00000221847/1-229 GHSWPCLQQT PTSTSCTITD VQLFSMAPYV LNVTAVHPWG SSSSFVPFIT ENSBTAP00000017046/1-232 GESWPCLQQT PEATSCVIPD VQMFSMVPYV LNITAVHPGG VSSSFVPFVP BACU002613/1-228 GESWPCLQQT PEATSCIIPD IQMFSMVPYV LNITAVHPRG VSSSFMPFVP bmy_15836T0/1-237 GESWPCLQQT PEATSCIIPD IQMFSMVPYV LNITAVHPRG VSSSFVPFVP ENSTTRP00000001599/1-205 GESWPCLQQT PEATSCIIPD IQMF-MVPYV LNITAVYPRG VSSSFVPFVP 151 200 ENSP00000221847/1-229 EHIIKPDPPE GVRLSPLAER QLQVQWEPPG SWPFPEIFSL KYWIRYKRQG ENSBTAP00000017046/1-232 EHIIKPDPPE GVCLSPLPGQ RLWVQWEPPR TWPFPEIFSL KYRIRYKRHG BACU002613/1-228 EHVIKPDPPE GVRLSPLPGQ RLWVQWEPPR SWPFPEIFSL KYRIRYKRHG bmy_15836T0/1-237 EH-------- ---------- RLWVQWEPPR SWPFPEIFSL KYRIRYKRHG ENSTTRP00000001599/1-205 EHIIKPDPPE GVRLSPLPGQ RLWVQWEPPR SWPFPEIFSL KYRIRYKRHG 201 250 ENSP00000221847/1-229 AARFHRVGPI EATSFILRAV RPRARYYVQV AAQDLTDYGE LSDWSLPATA ENSBTAP00000017046/1-232 AARFRQVGPI EATSFTLKAV RPQAKYCIQV AAQDLTDYGE WSAWSLPAAA BACU002613/1-228 AARFRQVGPI EGTSFTLKAV RPQAKYCIQV AALDLTDYGE SSAWSLPAIA bmy_15836T0/1-237 AARFRQVGPI ESTSFTLKAM RPQAKYCIQV AALDLTDYGE SSAWSLPAVA ENSTTRP00000001599/1-205 AARFRQVGPI EGTSFTLKAV RPQAKYCIQV AALDLTDYGE SSAWSLPAVA 251 300 ENSP00000221847/1-229 TMSLGK ENSBTAP00000017046/1-232 SMTLGK BACU002613/1-228 SMTLGK bmy_15836T0/1-237 SMTLGK ENSTTRP00000001599/1-205 SVTLGK