KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:19 2014 Check: 00 .. Name: ENSTTRP00000001600/1-310 Len: 435 Check: 4651 Weight: 1.00 Name: ENSP00000262962/1-323 Len: 435 Check: 2437 Weight: 1.00 Name: ENSBTAP00000017047/1-320 Len: 435 Check: 9325 Weight: 1.00 Name: bmy_15835T0/1-321 Len: 435 Check: 9115 Weight: 1.00 Name: BACU002612/1-418 Len: 435 Check: 7951 Weight: 1.00 // 1 50 ENSTTRP00000001600/1-310 MSERKVLNKY ---------- ---------- ---------- ---------- ENSP00000262962/1-323 MSERKVLNKY ---------- ---------- ---------- ---------- ENSBTAP00000017047/1-320 MSERKVLNKY ---------- ---------- ---------- ---------- bmy_15835T0/1-321 MSERKVLNKY ---------- ---------- ---------- ---------- BACU002612/1-418 MSERKVLNKY YPPDFDPSKI PKLKLPKDRQ YVVRLMAPFN MRTNIPDVSE 51 100 ENSTTRP00000001600/1-310 ---------- ---------- -----YPPDF DPSKIPKLKL PKDRQYVVRL ENSP00000262962/1-323 ---------- ---------- -----YPPDF DPSKIPKLKL PKDRQYVVRL ENSBTAP00000017047/1-320 ---------- ---------- -----YPPDF DPSKIPKLKL PKDRQYVVRL bmy_15835T0/1-321 ---------- ---------- -----YPPDF DPSKIPKLKL PKDRQYVVRL BACU002612/1-418 VLAGTCVEIS VTGSKSVHTR QGPKYYPPDF DPSKIPKLKL PKDRQYVVRL 101 150 ENSTTRP00000001600/1-310 MAPFNMRCKT CGEYIYKGKK FNARKETVQN ESYLGLPIFR FYIKCTRCLA ENSP00000262962/1-323 MAPFNMRCKT CGEYIYKGKK FNARKETVQN EVYLGLPIFR FYIKCTRCLA ENSBTAP00000017047/1-320 MAPFNMRCKT CGEYIYKGKK FNARKETVQN ESYLGLPIFR FYIKCTRCLA bmy_15835T0/1-321 MAPFNMRCKT CGEYIYKGKK FNARKETVQN ESYLGLPIFR FYIKCTRCLA BACU002612/1-418 MAPFNMRCKT CGEYIYKGKK FNARKETVQN ESYLGLPIFR FYIKCTRCLA 151 200 ENSTTRP00000001600/1-310 EITFKTDPEN TDYTMEHGAT RNFQAEKLLE EEEKRVQKER EDEELNNPMK ENSP00000262962/1-323 EITFKTDPEN TDYTMEHGAT RNFQAEKLLE EEEKRVQKER EDEELNNPMK ENSBTAP00000017047/1-320 EITFKTDPEN TDYTMEHGAT RNFQAEKLLE EEEKRVQKER EDEELNNPMK bmy_15835T0/1-321 EITFKTDPEN TDYTMEHGAT RNFQAEKLLE EEEKRVQKER EDEELNNPMK BACU002612/1-418 EITFKTDPEN TDYTMEHGAT RNFQAEKLLE EEEKR----- ---------- 201 250 ENSTTRP00000001600/1-310 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262962/1-323 VLENRTKDSK LEMEVLENLQ ELKDLNQRQA HVDFEAMLRQ HRLSEEERRR ENSBTAP00000017047/1-320 VLENRTKDSK LEMEVLENLQ ELKDLNQRQA HVDFEAMLRQ HRLSEEERQR bmy_15835T0/1-321 VLENRTKDSK LEMEVLENLQ ELKDLNQRQA HVDFEAMLRQ HRLSEEERQE BACU002612/1-418 VLENRTKDSK LEMEVLENLQ ELKDLNQRQA HVDFEAMLRQ HRLSEEERQE 251 300 ENSTTRP00000001600/1-310 XXXXXXXXXX ---------- ---------- ---------- ---------- ENSP00000262962/1-323 QQQEEDEQET ---------- ---------- ---------- ---------- ENSBTAP00000017047/1-320 QEQEEDERET ---------- ---------- ---------- ---------- bmy_15835T0/1-321 REQEEDEREA ---------- ---------- ---------- ---------- BACU002612/1-418 REQXXXXXXX RAGAGGPGAP TPLTAFTGPF PLPGIPPSGS FHSSLAQHVP 301 350 ENSTTRP00000001600/1-310 -------XAL VEESRKRRLL EDSDSEEDAA PTQPQQALLP NPTAILDEAP ENSP00000262962/1-323 -------AAL LEEARKRRLL EDSDSEDEAA PSPLQPALRP NPTAILDEAP ENSBTAP00000017047/1-320 -------AAL VEESRKRRLL EDSDSEEDTS PTQPQPALRP NPTAILDETP bmy_15835T0/1-321 -------AAL VEESRKRRLL EDSDSEEDAA PTQPQQALLP NPTAILDEAP BACU002612/1-418 KSHVPSRRAL VEESRKRRLL EDSDSEEDAA PTQPQQALLP NPTAILDEAP 351 400 ENSTTRP00000001600/1-310 KTKRNAESWE RS-GTFGSSP QLSPVVV--K TDLGRSIQHA ---------- ENSP00000262962/1-323 KPKRKVEVWE QSVGSLGSRP PLSRLVVVKK AKADPDCSNG QPQAAPTPGA ENSBTAP00000017047/1-320 KAKRKAESWE RSVGTLGSRP QLSGLVV-KK TGLDTSIRRG --RAPPLPGV bmy_15835T0/1-321 KAKRKVEXWE RSVGTFGSSP QLSGLVVVKK TDLGRSIQRG --GVLPAPGA BACU002612/1-418 KAKRKAERWE RSVGTFGSSP QLSGLVVVKK TDLGRSSQRG --GVLPAPGA 401 450 ENSTTRP00000001600/1-310 MKNGQVAGPA PQTSGASSLS QLGVYSDSED SSGSN ENSP00000262962/1-323 PQNRKEANPT PLTPGASSLS QLGAYLDSDD SNGSN ENSBTAP00000017047/1-320 MKNGQVAGPA PQMPGTSSLS QLGVYSDSED SSGSN bmy_15835T0/1-321 MKNGQVAGPA PQTPGTSSLS QLGVYSDSED SSGSN BACU002612/1-418 MKNGQVAGPA LQTPGTSSLS QLGVYSDSED SSGSN