KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:23 2014 Check: 00 .. Name: ENSBTAP00000017060/1-797 Len: 1246 Check: 1575 Weight: 1.00 Name: ENSP00000393313/1-910 Len: 1246 Check: 2340 Weight: 1.00 Name: BACU010314/1-899 Len: 1246 Check: 4353 Weight: 1.00 Name: bmy_18570T0/1-927 Len: 1246 Check: 6827 Weight: 1.00 Name: ENSTTRP00000000800/1-853 Len: 1246 Check: 7101 Weight: 1.00 // 1 50 ENSBTAP00000017060/1-797 MAAPLIPLSQ QIPAGNPLYE SYYKQVDPAY TGRVGASEAA LFLKKSGLSD ENSP00000393313/1-910 MAAPLIPLSQ QIPTGNSLYE SYYKQVDPAY TGRVGASEAA LFLKKSGLSD BACU010314/1-899 ---------- -ISTGNPLYE SYYKQVDPAY TGRVGASEAA LFLKKSGLSD bmy_18570T0/1-927 ---------- QIPTGNPLYE SYYKQVDPAY TGRVGASEAA LFLKKSGLSD ENSTTRP00000000800/1-853 ---------- -IPTGNPLYE SYYKQVDPAY TGRVGASEAA LFLKKSGLSD 51 100 ENSBTAP00000017060/1-797 IILGKIWDLA DPEGKGYLDK QGFYVALRLV ACAQSGHEVT LSNLNLNMPP ENSP00000393313/1-910 IILGKIWDLA DPEGKGFLDK QGFYVALRLV ACAQSGHEVT LSNLNLSMPP BACU010314/1-899 IILGKIWDLA DPEGKGFLDK QGFYVALRLV ACAQSGHEVT LSNLNLNMPP bmy_18570T0/1-927 IILGKIWDLA DPEGKGFLDK QGFYVALRLV ACAQSGHEVT LSNLNLNMPP ENSTTRP00000000800/1-853 IILGKIWDLA DPEGKGFLDK QGFYVALRLV ACAQSGHEVT LSNLNLNMPP 101 150 ENSBTAP00000017060/1-797 PKFHDSSSPL MVTAPSAEAH WAVRVEEKAK FDGIFESLLP VNGLLSGDKV ENSP00000393313/1-910 PKFHDTSSPL MVTPPSAEAH WAVRVEEKAK FDGIFESLLP INGLLSGDKV BACU010314/1-899 PKFHDTSSPL MVTPPSAEAH WAVRVEEKAK FDGIFESLLP ISGLLSGDKV bmy_18570T0/1-927 PKFHDTSSPL MVTPPSAEAH WAVRVEEKAK FDGIFESLLP ISGLLSGDKV ENSTTRP00000000800/1-853 PKFHDTSSPL MVTPPSAEAH WAVRVEEKAK FDGIFESLLP ISGLLSGDKV 151 200 ENSBTAP00000017060/1-797 KPVLMNSKLP LDVLGRVWDL SDIDKDGHLD RDEFAVAMHL VYRALEKEPV ENSP00000393313/1-910 KPVLMNSKLP LDVLGRVWDL SDIDKDGHLD RDEFAVAMHL VYRALEKEPV BACU010314/1-899 KPVLMNSKLP LDVLGRVWDL SDIDKDGHLD RDEFAVAMHL VYRALEKEPV bmy_18570T0/1-927 KPVLMNSKLP LDVLGRVWDL SDIDKDGHLD RDEFAVAMHL VYRALEKEPV ENSTTRP00000000800/1-853 KPVLMNSKLP LDVLGRVWDL SDIDKDGHLD RDEFAVAMHL VYRALEKEPV 201 250 ENSBTAP00000017060/1-797 PSVLPPSLIP PSKRKKTMFA GAVPVLPASP PPKDSLRSTP SHGSVSSLNS ENSP00000393313/1-910 PSALPPSLIP PSKRKKTVFP GAVPVLPASP PPKDSLRSTP SHGSVSSLNS BACU010314/1-899 PSALPPSLIP PSKRKKTVFP GAVPVLPASP PPKDSLRSTP SHGSVSSLNS bmy_18570T0/1-927 PSALPPSLIP PSKRKKTVFP GAVPVLPASP PPKDSLRSTP SHGSVSSLNS ENSTTRP00000000800/1-853 PSALPPSLIP PSKRKKTVFP GAVPVLPASP PPKDSLRSTP SHGSVSSLNS 251 300 ENSBTAP00000017060/1-797 TGSLSPKHSI KQAQPTVSWV VPVADKMRFD EIFLKTDLDL DGYVSGQEVK ENSP00000393313/1-910 TGSLSPKHSL KQTQPTVNWV VPVADKMRFD EIFLKTDLDL DGYVSGQEVK BACU010314/1-899 TGSLSPKHGI KQTQPTVNWV VPVADRMRFD EIFLKTDLDL DGCVSGQEVK bmy_18570T0/1-927 TGSLSPKHSI KQTQPTVNWV VPVADKMRFD EIFLKTDLDL DGYVSGQEVK ENSTTRP00000000800/1-853 TGSLSPKHSI KQTQPTVNWV VPVADKMRFD EIFLKTDLDL DGYVSGQEVK 301 350 ENSBTAP00000017060/1-797 EIFMHSGLTQ NLLAHIWALA DTRQTGKLSK DQFALAMYFI QQKVSKGIDP ENSP00000393313/1-910 EIFMHSGLTQ NLLAHIWALA DTRQTGKLSK DQFALAMYFI QQKVSKGIDP BACU010314/1-899 EIFMHSGLTQ NLLAHIWALA DTRQTGKLSK DQFALAMYFI QQKVSKGIDP bmy_18570T0/1-927 EIFMHSGLTQ NLLAHIWALA DTRQTGKLSK DQFALAMYFI QQKVSKGIDP ENSTTRP00000000800/1-853 EIFMHSGLTQ NLLAHIWALA DTRQTGKLSK DQFALAMYFI QQKVSKGIDP 351 400 ENSBTAP00000017060/1-797 PQVLSPDMVP PSERGTPIPD SSSTLGSGEF TGVKELDDIS QEISQLQREK ENSP00000393313/1-910 PQVLSPDMVP PSERGTPGPD SSGSLGSGEF TGVKELDDIS QEIAQLQREK BACU010314/1-899 PQVLSPDMVP PSERGTPIPD SSSSLGSGEF TGVKELDDIS QEIAQLQREK bmy_18570T0/1-927 PQVLSPDMVP PSERGTPIPD SSSSLGSGEF TGVKELDDIS QEIAQLQREK ENSTTRP00000000800/1-853 PQVLSPDMVP PSERGTPIPD SSSSLGSGEF TGVKELDDIS QEIAQLQREK 401 450 ENSBTAP00000017060/1-797 YSLEQDIREK EEAIRQKTNE VQ-------- ---------- ---------- ENSP00000393313/1-910 YSLEQDIREK EEAIRQKTSE VQ-------- ---------- ---------- BACU010314/1-899 YSLEQDIREK EEAIRQKTNE VQ-------- ---------- ---------- bmy_18570T0/1-927 YSLEQDIREK EEAIRQKTNE VQRRLCRREE TRVVCRALRA WLSCAAGPDS ENSTTRP00000000800/1-853 YSLEQDIREK EEAIRQKTNE VQ-------- ---------- ---------- 451 500 ENSBTAP00000017060/1-797 ---------- ---------- ---------- ---------- ---------- ENSP00000393313/1-910 ---------- ---------- ---------- ---------- ---------- BACU010314/1-899 ---------- ---------- ---------- ---------- ---------- bmy_18570T0/1-927 LRVGLRVLRA QSRGRRSEAE QSALQPPRLG EGTPSDFRPC PRTDPSDTVP ENSTTRP00000000800/1-853 ---------- ---------- ---------- ---------- ---------- 501 550 ENSBTAP00000017060/1-797 ---------- ---------- ---------- ---------- ---------- ENSP00000393313/1-910 ---------- ---------- ---------- ---------- ---------- BACU010314/1-899 ---------- ---------- ---------- ---------- ---------- bmy_18570T0/1-927 CHPYHLTPIL SAVWCGGAGL IFPFTLALAR LATWVPGQFS LPLCLGHSAQ ENSTTRP00000000800/1-853 ---------- ---------- ---------- ---------- ---------- 551 600 ENSBTAP00000017060/1-797 ---------- ---------- ---------- ---------- ---------- ENSP00000393313/1-910 ---------- ---------- ---------- ---------- ---------- BACU010314/1-899 ---------- ---------- ---------- ---------- ---------- bmy_18570T0/1-927 ALVCIPKAGD LGAVMSFGSG ETSHRVSGTC SWAILRKPLG RCDVWRFDFG ENSTTRP00000000800/1-853 ---------- ---------- ---------- ---------- ---------- 601 650 ENSBTAP00000017060/1-797 ---------- ---------- ---------- ---------- ---------- ENSP00000393313/1-910 ---------- ---------- ---------- ---------- ---------- BACU010314/1-899 ---------- ---------- ---------- ---------- ---------- bmy_18570T0/1-927 SCCLFPDGFG QEIMCHACQH RLQVRAQRRV AGLGPQGLLA AEASAVSGMA ENSTTRP00000000800/1-853 ---------- ---------- ---------- ---------- ---------- 651 700 ENSBTAP00000017060/1-797 ---------- ---------- ---------- ---------- ---------- ENSP00000393313/1-910 ---------- ---------- ---------- ---------- ---------- BACU010314/1-899 ---------- ---------- ---------- ---------- ---------- bmy_18570T0/1-927 CGAQPLVLWA RFPLIQLEHD TPFSSGSSAA PSTLHIPGSF PGYHLLVLWV ENSTTRP00000000800/1-853 ---------- ---------- ---------- ---------- ---------- 701 750 ENSBTAP00000017060/1-797 ---------- --ELQNDLDR ETSSLQELEA QKQDAQDRLD EMDQQKAKLR ENSP00000393313/1-910 ---------- --ELQNDLDR ETSSLQELEA QKQDAQDRLD EMDQQKAKLR BACU010314/1-899 ---------- --ELQNDLDR ETSSLQELEA QKQDAQDRLD EMDQQKAKLR bmy_18570T0/1-927 HRSGASLSSC APELQNDLDR ETSSLQELEA QKQDAQDRLD EMDQQKAKLR ENSTTRP00000000800/1-853 ---------- --ELQNDLDR ETSSLQELEA QKQDAQDRLD EMDQQKAKLR 751 800 ENSBTAP00000017060/1-797 DMLSDVRQKC QDETQMISSL KTQIQSQESD LKSQEDDLNR AKSELNRLQQ ENSP00000393313/1-910 DMLSDVRQKC QDETQMISSL KTQIQSQESD LKSQEDDLNR AKSELNRLQQ BACU010314/1-899 DMLSDVRQKC QDETQMISSL KTQIQSQESD LKSQEDDLNR AKSELNRLQQ bmy_18570T0/1-927 DMLSDVRQKC QDETQMISSL KTQIQSQESD LKSQEDDLNX AKSELNRLQQ ENSTTRP00000000800/1-853 DMLSDVRQKC QDETQMISSL KTQIQSQESD LKSQEDDLNR AKSELNRLQQ 801 850 ENSBTAP00000017060/1-797 EETQLEQSIQ AGKVQLETII KSLKSTQDEI NQ-------- ---------- ENSP00000393313/1-910 EETQLEQSIQ AGRVQLETII KSLKSTQDEI NQ-------- ---------- BACU010314/1-899 EETQLEQSIQ AGKVQLETII KSLKSTQDEI NQ-------- ---------- bmy_18570T0/1-927 EETQLEQSIQ AGKVQLETII KSLKSTQDEI NQFVPSHQMS EHLPFSGTTW ENSTTRP00000000800/1-853 EETQLEQSIQ AGKVQLETII KSLKSTQDEI NQ-------- ---------- 851 900 ENSBTAP00000017060/1-797 ---------- ---------- --------AR SRLSQLHESH REAQRSLEQH ENSP00000393313/1-910 ---------- ---------- --------AR SKLSQLHESR QEAHRSLEQY BACU010314/1-899 ---------- ---------- --------AR SKLSQLHESH QEAQRSLEQY bmy_18570T0/1-927 GSRRVSSWFT SSLASRKHGN RDCLLRRWAR SKLSQLHESH QEAQRSLEQY ENSTTRP00000000800/1-853 ---------- ---------- --------AR SKLSQLHESH QEAQRSLEQY 901 950 ENSBTAP00000017060/1-797 DEMLDGAPGV SLSSLADLST GVSLTERGGF GAMDDPFKNK ALLFSNNAQE ENSP00000393313/1-910 DQVLDGAHGA SLTDLANLSE GVSLAERGSF GAMDDPFKNK ALLFSNNTQE BACU010314/1-899 DEVLDGAHGA SLTNLAELSE GVSLTERGSF GAMDDPFKNK ALLFSNNAQE bmy_18570T0/1-927 DEVLDGAHGA SLTNLAELSE GISLTERGGF GAM------- ---------- ENSTTRP00000000800/1-853 DEVLDGAHGA SLTNLAELSE GVSLTERGGF GAMDDPFKNK ALLFSNNTQE 951 1000 ENSBTAP00000017060/1-797 LHPDPFQAED PFKSDPFKGA DPFKGDPFQS DPFAEQQTAS TDPFGGDPFK ENSP00000393313/1-910 LHPDPFQTED PFKSDPFKGA DPFKGDPFQN DPFAEQQTTS TDPFGGDPFK BACU010314/1-899 LHPDPFQAED PFKSDPFKGA DPFKGDPFQS DPFAEQQTAS TDPFGGDPFK bmy_18570T0/1-927 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000800/1-853 LHPDPFQAED PFKSDPFKGA DPFKGDPFQS DPFAEQQTAS TDPFGGDPFK 1001 1050 ENSBTAP00000017060/1-797 ESDPFRGSTP DDFFKKQTKS DPFTSDPFTK NPSLPSKLDP FESSDPFSSS ENSP00000393313/1-910 ESDPFRGSAT DDFFKKQTKN DPFTSDPFTK NPSLPSKLDP FESSDPFSSS BACU010314/1-899 ESDPFHGSAP DDFFKKQTKN DPFTSDPFTK NPSLPSKLDP FESSDPFSSS bmy_18570T0/1-927 ---------- ---------- ---------- -----VKVE- ---------- ENSTTRP00000000800/1-853 ENDPFHGSAP DDFFKKQTKN DPFTSDPFTK NPSLPSKLDP FESSDPFSSS 1051 1100 ENSBTAP00000017060/1-797 TVSSKGSGPF GALDPFGSGS FSSAEGFADF SQMSK----- ---------- ENSP00000393313/1-910 SVSSKGSDPF GTLDPFGSGS FNSAEGFADF SQMSKPPPSG PFTSSLGGAG BACU010314/1-899 SVSSKGSGPF GTLDPFGSGS FNSAEGFADF SQMSKPPTSG PFTSSFGGAG bmy_18570T0/1-927 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000800/1-853 SVSSKGSGPF GTLDPFGSGS FNSAEGFADF SQMSKPPTSG PFTSSFGGAG 1101 1150 ENSBTAP00000017060/1-797 ---------- ---------- ---------- ---------- ---------- ENSP00000393313/1-910 FSDDPFKSKQ DTPALPPKKP APPRPKPPSG KSTPVSQLGS ADFPEAPDPF BACU010314/1-899 FSDDPFKSKQ DTPALPPKKP APPRPKPPSG KSTPVSQLGS ADFPEPPDPF bmy_18570T0/1-927 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000800/1-853 CSDDPFKSKQ DTPALPPKKP APPRPKPPSG KSTPVSQLGS ADFPEPPDPF 1151 1200 ENSBTAP00000017060/1-797 ---------- ---------- ---------- ---------- --------FG ENSP00000393313/1-910 QPLGADSGDP FQSKKGFGDP FSGKDPFVPS SAAKPSKASA SGFADFTSFG BACU010314/1-899 QPLGADSSDP FQNKKGFGDP FSGKDPFAPS SSAKPSKASS LGFADFTSFG bmy_18570T0/1-927 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000800/1-853 QPLGADSSDP FQNKKGFGDP FSGKDPFAPS SSAKPSKASS LGFADFTSVS 1201 1250 ENSBTAP00000017060/1-797 NEEQQLAWAK RESEKAEQER LARLRRQEQE DLELAIALSK ADMPAA ENSP00000393313/1-910 NEEQQLAWAK RESEKAEQER LARLRRQEQE DLELAIALSK ADMPAA BACU010314/1-899 NEEQQLAWAK RESEKAEQGR LARLRRQEQE DLELAIALSK ADMPAA bmy_18570T0/1-927 ---------- ---------- ---------- ---------- ------ ENSTTRP00000000800/1-853 ---------- ---------- ---------- ---------- ------