KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:00:24 2014 Check: 00 .. Name: ENSP00000362409/1-746 Len: 777 Check: 8183 Weight: 1.00 Name: bmy_04060T0/1-672 Len: 777 Check: 5714 Weight: 1.00 Name: ENSBTAP00000017069/1-743 Len: 777 Check: 9878 Weight: 1.00 Name: BACU016272/1-775 Len: 777 Check: 8419 Weight: 1.00 // 1 50 ENSP00000362409/1-746 ---------- ----MGDVL- -------STH LDDAR----- --RQHIAEKT bmy_04060T0/1-672 MNWDLGQGGC PSLGQGCCP- -------ETT APTSRPL--- --CPSLSEKT ENSBTAP00000017069/1-743 ---------- --------L- -------EAV MPTSEPV--- --YPSLSEKT BACU016272/1-775 --MTTSLGDC IAIESEDVLY VCKKIEVHRR LTNEDPVGVK FPCQLRPEKT 51 100 ENSP00000362409/1-746 GKILTEFLQF YEDQYGVALF NSMRHEIEGT GLPQAQLLWR KVPLDERIVF bmy_04060T0/1-672 GKILTEFLRF YEDQYGVALF NSMRHEIEGT GAPQAQLLWR KVPLDERIIF ENSBTAP00000017069/1-743 GKILTEFLRF YEDQYGVALF NSMRHEIEGT GLPQAQLLWR KVPLEERIIF BACU016272/1-775 GKILTEFLRF YEDQYGVALF NSMRHEIEGT GAPQAQLLWR KVPLDERIIF 101 150 ENSP00000362409/1-746 SGNLFQHQED SKKWRNRFSL VPHNYGLVLY ENKAAYERQV PPRAVINSAG bmy_04060T0/1-672 SGNLFQCQED NKKWRNRFSL VPHNYGLVLY ENKVAYERQV PPRAVINSAG ENSBTAP00000017069/1-743 SGNLFQYQED NKKWRNRFSL VPHNYGLVLY ENKVAYERQI PPRAVINSAG BACU016272/1-775 SGNLFQCQED NKRWRNRFSL VPHNYGLVLY ENKVAYERQV PPRAVINSAG 151 200 ENSP00000362409/1-746 YKILTSVDQY LELIGNSLPG TTAKSGSAPI LKCPTQFPLI LWHPYARHYY bmy_04060T0/1-672 YKILTSLDQY LELVGNSLPG TTSKSGTAPV VKCPTQFPLI LWHPSARHYY ENSBTAP00000017069/1-743 YKILTSLDQY LELVGNSLPG TTPKSGSAPI LKCPTQFPLI LWHPSARHYY BACU016272/1-775 YKILTSLDQY LELVGNSLPG TTSKSGSAPV LKCPTQFPLI LWHPSARHYY 201 250 ENSP00000362409/1-746 FCMMTEAEQD KWQAVLQDCI RHCNNGIPED SKVEGPAFTD AIRMYRQSKE bmy_04060T0/1-672 FCMMTEAEQD KWQAVLQDCV RHCNNGIPEA SKVEGPAFTD AIRMYRQSKE ENSBTAP00000017069/1-743 FCMMTEAEQD KWQAVLQDCV RHCNNGIPED SKVEGPAFTD AIRMYRQSKE BACU016272/1-775 FCLMTEAEQD KWQAVLQDCV RHCNNGIPED SKVEGPAFTD AIRMYRQCKE 251 300 ENSP00000362409/1-746 LYGTWEMLCG NEVQILSNLV MEELGPELKA ELGPRLKGKP QERQRQWIQI bmy_04060T0/1-672 LYGTWEMLCG NEVQILSNLV MEELGPELKA ELAPRLKGKP QERQRQWIQI ENSBTAP00000017069/1-743 LYGTWEMLCG NEVQILSNLV MEELGPELKA ELIPRLKGKP QERQRQWIQI BACU016272/1-775 LYGTWEMLCG NEVQILSNLV MEELGPELKA ELTPRLKGKP QERQRQWIQI 301 350 ENSP00000362409/1-746 SDAVYHMVYE QAKARFEEVL SKVQQVQPAM QAVIRTDMDQ IITSKEHLAS bmy_04060T0/1-672 SDTVYRMVYE QAKARFEAVL SKLQLARPAM EAVIRTDMDQ IITSKEHLAS ENSBTAP00000017069/1-743 SDAVYRMVYE QAKARFEAVL SKLQLARPAM EAVIRTDMDQ IITSKEHLAS BACU016272/1-775 SDTVYRMVYE QAKARFEAVL SKLQLARPAM EAVIRTDMDQ IITSKEHLAS 351 400 ENSP00000362409/1-746 KIRAFILPKA EVCVRNHVQP YIPSILEALM VPTSQGFTEV RDVFFKEVTD bmy_04060T0/1-672 KIRASILPKA EVCVRNHVQP YIPSILEALM VPTSQGFTEV RDVFFKEVTD ENSBTAP00000017069/1-743 KIRASILPKA EVCVRNHVQP YIPSILEALM VPTSQGFTEV RDVFFKEVTD BACU016272/1-775 KIRASILPKA EVCVRNHVQP YIPSILEALM VPTSQGFTEV RDVFFKEVTD 401 450 ENSP00000362409/1-746 MNLNVINEGG IDKLGEYMEK LSRLAYHPLK MQSCYEKMES LRLDGLQQRF bmy_04060T0/1-672 MNLNVINEGG IDKLGEYMEK LSQLAYHPLK MQSCYEKMEP LRLDGLQQRF ENSBTAP00000017069/1-743 MNLNVINEGG IDKLGEYMEK LSQLAYHPLK MHSCYEKMEP LRLDGLQQRF BACU016272/1-775 MNLNVINEGG IDKLGEYMEK LSQLAYHPLK MQSCYEKMEP LRLDGLQQRF 451 500 ENSP00000362409/1-746 DVSSTSVFKQ RAQIHMREQM DNAVYTFETL LHQELGKGPT KEELCKSIQR bmy_04060T0/1-672 DVSSTSVFKQ RAQILMREGV LAAV------ ---------- ---------- ENSBTAP00000017069/1-743 DVSSMSVFKQ RAQIHMREQM DNAVYTFETL LHQELGKGPT KEELCKSIQR BACU016272/1-775 DVSSTSVFKQ RAQILMREQM DNAVYTFETL LHQELGKGPT KEELCKSIQR 501 550 ENSP00000362409/1-746 VLERVLKKYD YDSSSVRKRF FREALLQISI PFLLKKLAPT CKSELPRFQE bmy_04060T0/1-672 ---------- ---------- --SPVVNVPT P-------PS CPV------- ENSBTAP00000017069/1-743 ILERVLKKYD YDSSTVRKRF FREALLQITI PFLLKKLAPT CKSELSRFQE BACU016272/1-775 ILERVLKKYD YDSSTVRKRF FREALLQITI PFLLKKLAPT CKSELSRFQE 551 600 ENSP00000362409/1-746 LIFEDFARFI LVENTYEEVV LQTVMKDILQ AVKEAAVQRK HNLYRDSMVM bmy_04060T0/1-672 ---------- ---------- ---------- AVKEAAVQRK HNLYRDSVVM ENSBTAP00000017069/1-743 LIFEDFARFI LVENTYEEVV LQTVMKDILQ AVKEAAVQRK HNLYRDSVVM BACU016272/1-775 LIFEDFARFI LVENTYEEVV LQTVMKDILQ AVKEAAVQRK HNLYRDSVVM 601 650 ENSP00000362409/1-746 HNSDPNLHLL AEGAPIDWGE EYSNSG-GGG SP-SPSTPES ATLSEKRRRA bmy_04060T0/1-672 HNSDPNLHLL AEGVPIDWGE EYSGSSDSGG DPGSPGIPEA AILSEKRRRA ENSBTAP00000017069/1-743 HNSDPNLHLL AEGVPIDWGE EYGDSGAGGG DP---GAQEA APLSEKRRRA BACU016272/1-775 HNSDPNLHLL AEGVPIDWGE EYSGSSDSGG DPGSPGTPEA AILSEKRRRA 651 700 ENSP00000362409/1-746 KQVVSVVQDE EVGLPFEASP ESPPPASPDG VTEIRGLLAQ GLRPESPPPA bmy_04060T0/1-672 KQVVSVVQDE EAGLPFKAVP EPLSPASADS ITELHGLLAR DQRAESPPLA ENSBTAP00000017069/1-743 KQVVSVVQDE DAGLPFEAAP EPPSPSSPDS VTELRGLLTR DLQAESPPLA BACU016272/1-775 KQVVSVVQDE EAGLPFKAVP EPLAPASADS ITELHGLLAQ DQQAESPPPA 701 750 ENSP00000362409/1-746 GPLLNGAPAG ESPQPKAAPE ASSPPASPLQ HLLPGKAVDL GPPKPSDQET bmy_04060T0/1-672 GPLLNGAPAQ ESPQPGAAPE AASPPASPLR QLPPGKASDL EPPKPSDQET ENSBTAP00000017069/1-743 GPLLNGAPVQ ESPQPGLAPE ATSPPASPLR QLPSEKLVGL EPPKPSDQET BACU016272/1-775 GPLLNGAPTQ ESPQPGAAPE AASPPASPLR QLPPGKASDL EPPKPSDQET 751 800 ENSP00000362409/1-746 GEQVSSPSSH PALHTTTEDS AGVQTEF bmy_04060T0/1-672 GEQVSGPGGR PPIHTTTEDG AGVQTEF ENSBTAP00000017069/1-743 GEQVSSPGSR PPIHTTTEDS AGVQTEF BACU016272/1-775 GEQVSGPGGH PPIHTTTEDG AGVQTEF