KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:31 2014 Check: 00 .. Name: ENSTTRP00000012209/1-477 Len: 584 Check: 996 Weight: 1.00 Name: ENSP00000309757/1-475 Len: 584 Check: 7085 Weight: 1.00 Name: ENSBTAP00000017086/1-478 Len: 584 Check: 5432 Weight: 1.00 Name: bmy_20641T0/1-584 Len: 584 Check: 5165 Weight: 1.00 Name: BACU010706/1-444 Len: 584 Check: 9826 Weight: 1.00 // 1 50 ENSTTRP00000012209/1-477 ---------- ---------- ---------- ---------- ---------- ENSP00000309757/1-475 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017086/1-478 ---------- ---------- ---------- ---------- ---------- bmy_20641T0/1-584 RKPATSSCPA SSLKGDLPCA RPLLQPAPAS GSAGPSVCPR SSRVPCNSHR BACU010706/1-444 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012209/1-477 -----MESKA LLLVALSVWL QSLTVSRGGV ATADRITGGK DFIDIESKFA ENSP00000309757/1-475 -----MESKA LLVLTLAVWL QSLTASRGGV AAADQ---RR DFIDIESKFA ENSBTAP00000017086/1-478 -----MESKA LLLLALSVCL QSLTVSRGGL VAADRITGGK DFRDIESKFA bmy_20641T0/1-584 GTRPEMESKA LLLVALSVWL QSLTVSRGGV ATADRITGGK DFIDIESKFA BACU010706/1-444 -----MESKA LLLVALSVWL QSLTVSRGGV ATADRITGGK DFIDIESKFA 101 150 ENSTTRP00000012209/1-477 LRTPEDTAED TCHLIPGVTE SVANCQFNHS SKTFMVLHGW TVTGMYESWV ENSP00000309757/1-475 LRTPEDTAED TCHLIPGVAE SVATCHFNHS SKTFMVIHGW TVTGMYESWV ENSBTAP00000017086/1-478 LRTPEDTAED TCHLIPGVTE SVANCHFNHS SKTFVVIHGW TVTGMYESWV bmy_20641T0/1-584 LRTPEDTAED TCHLIPGVTE SVAHCHFNHS SKTFMVLHGW TVTGMYESWV BACU010706/1-444 LRTPEDTAED TCHLIPGVTE SVANCHFNHS SKTFMVLHGW TVTGMYESWV 151 200 ENSTTRP00000012209/1-477 PKLVAALYKR EPDSNVIVVD WLSRAQQHYP VSAGYTKLVG QDVAKFINWM ENSP00000309757/1-475 PKLVAALYKR EPDSNVIVVD WLSRAQEHYP VSAGYTKLVG QDVARFINWM ENSBTAP00000017086/1-478 PKLVAALYKR EPDSNVIVVD WLSRAQQHYP VSAGYTKLVG QDVAKFMNWM bmy_20641T0/1-584 PKLVAALYKR EPDSNVIVVD WLSRAQQHYP VSAGYTKLVG QDVAKFINWM BACU010706/1-444 PKLVAALYKR EPDSNVIVVD WLSRAQQHYP VSAGYTKLVG QDVATFINWM 201 250 ENSTTRP00000012209/1-477 ADEFNYPLDN VHLLGYSLGA HVAGIAGSLT NKKVNRITGL DPAGPNFEYA ENSP00000309757/1-475 EEEFNYPLDN VHLLGYSLGA HAAGIAGSLT NKKVNRITGL DPAGPNFEYA ENSBTAP00000017086/1-478 ADEFNYPLGN VHLLGYSLGA HAAGIAGSLT NKKVNRITGL DPAGPNFEYA bmy_20641T0/1-584 ADEFNYPLDN VHLLGYSLGA HVAGIAGSLT NKKVNRITGL DPAGPNFEYA BACU010706/1-444 ADEFNYPLDN VHLLGYSLGA HVAGIAGSLT NKKVNRITGL DPAGPNFEYA 251 300 ENSTTRP00000012209/1-477 EAPGRLSPDD ADFVDVLHTF TRGSPGRSIG IQKPVGHVDI YPNGGTFQPG ENSP00000309757/1-475 EAPSRLSPDD ADFVDVLHTF TRGSPGRSIG IQKPVGHVDI YPNGGTFQPG ENSBTAP00000017086/1-478 EAPSRLSPDD ADFVDVLHTF TRGSPGRSIG IQKPVGHVDI YPNGGTFQPG bmy_20641T0/1-584 EAPGRLSPDD ADFVDVLHTF TRGSPGRSIG IQKPVGHVDI YPNGGTFQPG BACU010706/1-444 EAPGRLSPDD ADFVDVLHTF TRGSPGRSIG IQKPVGHVDI YPNGGTFQPG 301 350 ENSTTRP00000012209/1-477 CNIAEAIRVI AERGLGXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000309757/1-475 CNIGEAIRVI AERGLGDVDQ LVKCSHERSI HLFIDSLLNE ENPSKAYRCS ENSBTAP00000017086/1-478 CNIGEALRVI AERGLGDVDQ LVKCSHERSV HLFIDSLLNE ENPSKAYRCN bmy_20641T0/1-584 CNIAEAIRVI AERGLGDVDQ LVKCSHERSI HLFIDSLLNE ENPSKAYRCN BACU010706/1-444 CNIAEAIRVI AERGLGDVDQ LVKCSHERSI HLFIDSLLNE ESPSKAYRCN 351 400 ENSTTRP00000012209/1-477 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXFH ENSP00000309757/1-475 SKEAFEKGLC LSCRKNRCNN LGYEINKVRA KRSSKMYLKT RSQMPYKVFH ENSBTAP00000017086/1-478 SKEAFEKGLC LSCRKNRCNN MGYEINKVRA KRSSKMYLKT RSQMPYKVFH bmy_20641T0/1-584 SREAFEKGLC LSCRKNRCNN LGYEVNKVRA KRSSKMYLKT RSQMPYKVFH BACU010706/1-444 SREAFEKGLC LSCRKNRCNN LGYEVNKVRA KRSSKMYLKT RSQMPYKVFH 401 450 ENSTTRP00000012209/1-477 YQVKIHFSGT ENDTHNNQAF EISLYGTVAE SENIPFTLPE VSTNKTYSFL ENSP00000309757/1-475 YQVKIHFSGT ESETHTNQAF EISLYGTVAE SENIPFTLPE VSTNKTYSFL ENSBTAP00000017086/1-478 YQVKIHFSGT ESNTYTNQAF EISLYGTVAE SENIPFTLPE VSTNKTYSFL bmy_20641T0/1-584 YQVKIHFSGT ESNTHTNQAF EISLYGTVAE SENTPFTLPE VSTNKTYSFL BACU010706/1-444 YQVKIHFSGT ESNTHTNQAF EISLYGTVAE SENIPFTLPE VSTNKTYSFL 451 500 ENSTTRP00000012209/1-477 IYTEVDIGEL LMLKLKWISD SYFSWSNWWS SSGFAIEKIR VKAGET-KKV ENSP00000309757/1-475 IYTEVDIGEL LMLKLKWKSD SYFSWSDWWS SPGFAIQKIR VKAGETQKKV ENSBTAP00000017086/1-478 LYTEVDIGEL LMLKLKWISD SYFSWSNWWS SPGFDIGKIR VKAGETQKKV bmy_20641T0/1-584 IYTEVDIGEL LMLKLRWISD SYFSWSNWWS SPGFAIEKIR VKAGETQKKV BACU010706/1-444 IYTEVDIGEL LMLKLKWISD SYFSWSNWWS SPGFAIEKIR VKAGETQKK- 501 550 ENSTTRP00000012209/1-477 IFCSREKMSH LQKGKSPVIF VKCHDKSLNR KSG------- ---------- ENSP00000309757/1-475 IFCSREKVSH LQKGKAPAVF VKCHDKSLNK KSG------- ---------- ENSBTAP00000017086/1-478 IFCSREKMSY LQKGKSPVIF VKCHDKSLNR KSG------- ---------- bmy_20641T0/1-584 IFCSREKMSH LQKGKSPVIF VKCHDKSLNR KSGWTCLSLN IRVSFIPMSL BACU010706/1-444 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000012209/1-477 ---------- ---------- ---------- ---- ENSP00000309757/1-475 ---------- ---------- ---------- ---- ENSBTAP00000017086/1-478 ---------- ---------- ---------- ---- bmy_20641T0/1-584 PLPLIQFILT TFVLNFQKLG KSIEERTAYE FYEE BACU010706/1-444 ---------- ---------- ---------- ----