KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:31 2014 Check: 00 .. Name: ENSP00000311538/1-388 Len: 572 Check: 5371 Weight: 1.00 Name: ENSBTAP00000017088/1-392 Len: 572 Check: 1254 Weight: 1.00 Name: bmy_08452T0/1-549 Len: 572 Check: 3242 Weight: 1.00 Name: BACU011086/1-414 Len: 572 Check: 3857 Weight: 1.00 Name: ENSTTRP00000007415/1-390 Len: 572 Check: 152 Weight: 1.00 // 1 50 ENSP00000311538/1-388 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017088/1-392 ---------- ---------- ---------- ---------- ---------- bmy_08452T0/1-549 APGHEPIADK SDQEGHAKEQ PHDCRTEVHV VVKLLRPGGV VAQDDVPLRA BACU011086/1-414 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007415/1-390 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000311538/1-388 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017088/1-392 ---------- ---------- ---------- ---------- ---------- bmy_08452T0/1-549 GGDKEQVGHE AASYDQPNCQ AEKASKARXD PAQRPQRVAD AQVAVYADAG BACU011086/1-414 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007415/1-390 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000311538/1-388 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017088/1-392 ---------- ---------- ---------- ---------- ---------M bmy_08452T0/1-549 EEKDAAVEVP IEEKEDELAD PSAKGPVVAG CVIVDEGGQR QDKRLNINAM BACU011086/1-414 ---------- -------MIE PSSFFPFC-- ---------- -QKRLNINAM ENSTTRP00000007415/1-390 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000311538/1-388 --MSKVFKKT SSNGKLSIYL GKRDFVDHVD TVEPIDGVVL VDPEYLKCRK ENSBTAP00000017088/1-392 ANMSRVFKKT CSNGKLSIYL GKRDFVDHVD MVEPIDGVVL VDPEYLKGRK bmy_08452T0/1-549 ANISRVFKKT CSNGKLSIYL GKRDFVDHVD MVEPI----- ---------- BACU011086/1-414 ANISRVFKKT CSNGKLSIYL GKRDFVDHVD MVEPIDGVVL VDPDYLKGRK ENSTTRP00000007415/1-390 --ISRVFKKT CSNGKLSIYL GKRDFVDHVD MVEPIDGVVL VDPDYLKGRK 201 250 ENSP00000311538/1-388 LFVMLTCAFR YGRDDLEVIG LTFRKDLYVQ TLQVVPAESS SPQGPLTVLQ ENSBTAP00000017088/1-392 MFVMLTCAFR YGHDDLDVIG LTFRKDLYVQ VQQVVPAESS SPRGPLTVLQ bmy_08452T0/1-549 VFVMLTCAFR YGHDDLDVIG LMFRKDLYVQ VQQVVPAEHS SPQGPLTVLQ BACU011086/1-414 MFVMLTCAFH YGHDDLDVIG LTFCKDLYVQ VQQVVPAEHS SPQGPLTVLQ ENSTTRP00000007415/1-390 MFVMLTCAFR YGHDDLDVIG LTFRKDLYVQ VQQVVPAEHS SPQGPLTVLQ 251 300 ENSP00000311538/1-388 ERLLHKLGDN AYPFTLQMVT NLPCSVTLQP GPEDAGKPCG IDFEVKSFCA ENSBTAP00000017088/1-392 ERLLHKLGDN AYPFTLQMVV NLPCSVTLQP GPDDTGKACG VDFEVKSFCA bmy_08452T0/1-549 EQLLHKLGDN AYPFTLQMVV NLPCSVTLQP GPDDTGKACG VDFEVKSFCA BACU011086/1-414 ERLLHKLGDN AYPFTLQMVV NLPCSVTLQP GPDDTGKACG VDFEVKSFCA ENSTTRP00000007415/1-390 ERLLHKLGDN AYPFTLQMVV NLPCSVTLQP GPDDTGKACG VDFEVKSFCA 301 350 ENSP00000311538/1-388 ENPEETVSKR DYVRLVVRKV QFAPPEAGPG PSAQTIRRFL LSAQPLQLQA ENSBTAP00000017088/1-392 ENLEEKVSKR DSVRLVIRKI QFAPLEPGPG PWAQTVRRFL LSAQPLQLQA bmy_08452T0/1-549 ENLKEKVSKR DSVRLVIRKI QFAALEPGPG PWAQTVRRFL LSAQPLQLQA BACU011086/1-414 ENLEEKVSKR DSVRLVIRKI HFAPLEPGPG PWAQTVRRFL LSAQPLQLQA ENSTTRP00000007415/1-390 ENLEEKVSKR DSVRLVIRKI QFAPLEPGPG PWAQTVRRFL LSAQPLQLQA 351 400 ENSP00000311538/1-388 WMDREVHYHG EPISVNVSIN NCTNKVIKKI KISVDQITDV VLYSLDKYTK ENSBTAP00000017088/1-392 WMDKEVNYHG QPISVNVSIN NSTNKVIKKI KISVDQITDV VLYSLDKYTK bmy_08452T0/1-549 WMDREVHYHG KPITVNVSIN NCTNKVIKKI KISVDQITDV VLYSLDKYTK BACU011086/1-414 WMDREVHYHG KPITVNVSIN NCTNKVIKKI KISVDQITDV VLYSLDKYTK ENSTTRP00000007415/1-390 WMDREVHYHG KSITVNVSIN NCTNKVIKKI KISVDQITDV ILYSLDKYTK 401 450 ENSP00000311538/1-388 TVFIQEFTET VAANSSFSQS FAVTPILAAS CQKRGLALDG KLKHEDTNLA ENSBTAP00000017088/1-392 TVFVQEFTET IAANSTFSKS FAVTPLLADN CHKQGLALDG KLKQGDTNLA bmy_08452T0/1-549 TVFVQEFMET IAANSTFSKS FAVTPLLAAN CQKQGLTLDG KFKHGDTNLA BACU011086/1-414 TVFVQEFMET IAANSTFSKS FAVTPLLAAN CQKQGLALDG KFKHGDTNLA ENSTTRP00000007415/1-390 TVFVQEFMET IAANSTFSKS FAVTPLLAAN CQKQGLALDG KFKHGDTNLA 451 500 ENSP00000311538/1-388 SSTIIRPGMD KELLGILVSY KVRVNLMVSC GGILGDLTAS DVGVELPLVL ENSBTAP00000017088/1-392 SSTILRPGVD KELLGILVSY KVRVNLMVSC GGILGDLTAS DVGVELPLIL bmy_08452T0/1-549 SSTILRPGMD KELLGILVSY KVRVNLMVSC GG-------- DVGVELPLIL BACU011086/1-414 SSTILRPGMD KELLGILVSY KVRVNLMVSC GG-------- DVGVELPLIL ENSTTRP00000007415/1-390 SSTILRPGMD KELLGILVSY KVRVNLMVSC GGILGDLTAS DVGVELPLIL 501 550 ENSP00000311538/1-388 IHPKPSH--- ---------- ---------- -------EAA SSEDIVIEEF ENSBTAP00000017088/1-392 MHPKPSN--- ---------- ---------- -------EAA SSEDIVIEEF bmy_08452T0/1-549 MHPKPSNGKG SLLWDQETGV DVEDAQTAVP NPPPPSAASA SSEDIVIEEL BACU011086/1-414 MHPKPSN--- ---------- -------AVP NPPSPSAASA SSEDIVIEEL ENSTTRP00000007415/1-390 MHPKPSN--- ---------- ---------- -------ASA SSEDIVIEEF 551 600 ENSP00000311538/1-388 TRK--GEEES QKAVEAEGDE GS ENSBTAP00000017088/1-392 AQQEPS-GES QEALAAEGNE GS bmy_08452T0/1-549 AQQQPGREES QEALAAKGDE GS BACU011086/1-414 TQQQPGREES QEALAAEGDE GS ENSTTRP00000007415/1-390 AQQQPGREES QEALAAEGDE GT