KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:00:34 2014 Check: 00 .. Name: ENSTTRP00000006762/1-423 Len: 423 Check: 5003 Weight: 1.00 Name: ENSP00000380414/1-375 Len: 423 Check: 146 Weight: 1.00 Name: bmy_08416T0/1-348 Len: 423 Check: 7443 Weight: 1.00 Name: ENSBTAP00000017097/1-375 Len: 423 Check: 279 Weight: 1.00 // 1 50 ENSTTRP00000006762/1-423 FWAFERAAQA SRQRAVRARP PRCPSPPPGA SSCPRAPGPR RPGPVXXXXX ENSP00000380414/1-375 MSASAPAAEG E--------- --GTPTQPAS EKEPEMPGPR ---------- bmy_08416T0/1-348 ---------- ---------- ---------- -----MPGPR ---------- ENSBTAP00000017097/1-375 MSSSGTAAEG E--------- --AAPAQPAS EKEPDMPGPR ---------- 51 100 ENSTTRP00000006762/1-423 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXKSL ENSP00000380414/1-375 ---------- ---------- -------EES EEEEDEDDEE EEEEEKEKSL bmy_08416T0/1-348 ---------- ---------- -------EES EEEDEDDEEE EEEEEKEKSL ENSBTAP00000017097/1-375 ---------- ---------- -------EES EEEDEDDDEE EEEEEKEKSL 101 150 ENSTTRP00000006762/1-423 IVEGKREKKK VERLTMQVSS LQREPFTIAQ GKGQKLCEIE RIHFFLSKKK ENSP00000380414/1-375 IVEGKREKKK VERLTMQVSS LQREPFTIAQ GKGQKLCEIE RIHFFLSKKK bmy_08416T0/1-348 IVEGKREKKK VERLTMQVSS LQREPFTIAQ GKGQKLCEIE RIHFFLSKKK ENSBTAP00000017097/1-375 IVEGKREKKK VERLTMQVSS LQREPFTIAQ GKGQKLCEIE RIHFFLSKKK 151 200 ENSTTRP00000006762/1-423 TDELRNLHKL LYNRPGTVSS LKKNVGQFSG FPFEKGSIQY KKKEEMLKKF ENSP00000380414/1-375 TDELRNLHKL LYNRPGTVSS LKKNVGQFSG FPFEKGSVQY KKKEEMLKKF bmy_08416T0/1-348 TDELRNLHKL LYNRPGTVSS LKKNVGQFSG FPFEKGSIQY KKKEEMLKKF ENSBTAP00000017097/1-375 TDELRNLHKL LYNRPGTVSS LKKNVGQFSG FPFEKGSIQY KKKEEMLKKF 201 250 ENSTTRP00000006762/1-423 RNAMLKSICE VLDLERSGVN SELVKRILNF LMHPKPSGKP LPKSKKTSSK ENSP00000380414/1-375 RNAMLKSICE VLDLERSGVN SELVKRILNF LMHPKPSGKP LPKSKKTCSK bmy_08416T0/1-348 RNAMLKSICE VLDLERSGVN SELVKRILNF LMHPKPSGKP LPKSKKTSSK ENSBTAP00000017097/1-375 RNAMLKSICE VLDLERSGVN SELVKRILNF LMHPKPSGKP LPKSKKSSSK 251 300 ENSTTRP00000006762/1-423 GNKKERNSSG MSRKAKRTKC PEILSDESSS DEEEKKNKEE SSDDEDKESE ENSP00000380414/1-375 GSKKERNSSG MARKAKRTKC PEILSDESSS DEDEKKNKEE SSDDEDKESE bmy_08416T0/1-348 GNKKERNSSG MSRKAKRTKC PEILSDESSS DEEEKKNKEE SSDDEDKESE ENSBTAP00000017097/1-375 GNKKERNSSG MARKAKRTKC PEILSDESSS DEEEKKNKEE SSEDEDKESE 301 350 ENSTTRP00000006762/1-423 EEPPKKTSKR EKPKQKATSK SKKSVKSANV KKADSSTTKK NQNSSKKESE ENSP00000380414/1-375 EEPPKKTAKR EKPKQKATSK SKKSVKSANV KKADSSTTKK NQNSSKKESE bmy_08416T0/1-348 EEPPKKTSKR EKPKQKATSK SKKSVKSANV KKADSSTTKK NQNSSKKESE ENSBTAP00000017097/1-375 EEPPKKTSKR EKPKQKATPK SKKSVKSANV KKADSSTTKK NQNSSKKESE 351 400 ENSTTRP00000006762/1-423 SEDSSDDEPL IKKLKKPPTD EELKETVKKL LASANLEEVT MKQICKEVYE ENSP00000380414/1-375 SEDSSDDEPL IKKLKKPPTD EELKETIKKL LASANLEEVT MKQICKKVYE bmy_08416T0/1-348 SEDSSDDEPL IKKLKKPPTD EELKETVKKL LASANLEEVT MKQICKEVYE ENSBTAP00000017097/1-375 SEDSSDDEPL IKKLKKPPTD EELKETVKKL LASANLEEVT MKQICKEVYE 401 450 ENSTTRP00000006762/1-423 NYPAYDLTER KEFIKTTVKE LIS ENSP00000380414/1-375 NYPTYDLTER KDFIKTTVKE LIS bmy_08416T0/1-348 NYPAYDLTER KEFIKTTVKE --- ENSBTAP00000017097/1-375 NYPAYDLTER KEFIKTTVKE LIS