KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:34 2014 Check: 00 .. Name: ENSP00000362711/1-546 Len: 597 Check: 6026 Weight: 1.00 Name: BACU003300/1-532 Len: 597 Check: 2053 Weight: 1.00 Name: ENSBTAP00000017100/1-561 Len: 597 Check: 5413 Weight: 1.00 Name: bmy_14984T0/1-590 Len: 597 Check: 5208 Weight: 1.00 Name: ENSTTRP00000009205/1-549 Len: 597 Check: 6410 Weight: 1.00 // 1 50 ENSP00000362711/1-546 MKNQDKKNGA AKQ----SNP KSSPGQPEAG PEGAQERPSQ AAPAVEAEGP BACU003300/1-532 MKNQDKKNGS AKQSGSTSNP KNTPGQPEAG PEGAQGRPSQ SAPATEAEGS ENSBTAP00000017100/1-561 MKNQDKKNGP SKQSGNTSNP KNTPGQPEAG PEGAQGRPSQ SAPATEAEGS bmy_14984T0/1-590 MKNQDKKNGS AKQSGNTSNP KNTPGQPEAG PEGAQGRPSQ SAPATEAEGS ENSTTRP00000009205/1-549 MKNQDKKNGA AKQSGNTSNP KNTPGQPEAG PEGAQGRPSQ SAPATEAEGS 51 100 ENSP00000362711/1-546 GSSQAPRKPE GAQARTAQSG ALRDVSEELS RQLEDILSTY CVDNNQGGPG BACU003300/1-532 -TIQAPGKAE G--------- ---------- ------VCQL CFSS---GQG ENSBTAP00000017100/1-561 -TSQAAGKAE GAQAKSAQSG ALRDVSEELS RQLEDILSTY CVDNSQGGPG bmy_14984T0/1-590 -TIQAPGKAE GAQAKTAQSG ALRDVSEELS RQLEDILSTY CVDNNQGGPG ENSTTRP00000009205/1-549 -TIQAPGKAE GAQAKTAQSG ALQDVSEELS RQLEDILSTY CVDNSQGGPG 101 150 ENSP00000362711/1-546 EDGAQGEPAE PEDAEKSRTY VARNGEPEP- TPVVNGEKEP SKGDPNTEEI BACU003300/1-532 EEFVVRRSSF W-NAEKSRTY ASRNGEPEPE TPVVNGEKET SKGEPGTDES ENSBTAP00000017100/1-561 EDVAQGEPAE PEDAEKSRTY ASRNGEPEPE TPVVNGEKEI SKGEPGPDEI bmy_14984T0/1-590 EDGAQGEPAE PEDAEKSRTY ASRNGEPEPE TPVVNGEKET SKGEPGTDES ENSTTRP00000009205/1-549 EDGAQGEPAE PEDAEKSRTY ASRNGEPEPE TPVVNGEKET SKGEPGTDES 151 200 ENSP00000362711/1-546 RQSDEVGDRD HRRPQEKKKA KGLGKEITLL MQTLNTLSTP EEKLAALCKK BACU003300/1-532 RASDEVVDRD HRRPQEKKKA KGLGKEITLL MQTLNTLSTP EEKLAALCKK ENSBTAP00000017100/1-561 RTSDEVVDRD HRRPQEKKKA KGLGKEITLL MQTLNTLSTP EEKLAALCKK bmy_14984T0/1-590 RASDEVVDRD HRRPQEKKKA KGLGKEITLL MQTLNTLSTP EEKLAALCKK ENSTTRP00000009205/1-549 RASDEVVDRD HRRPQEKKKA KGLGKEITLL MQTLNTLSTP EEKLAALCKK 201 250 ENSP00000362711/1-546 YAELLEEHRN SQKQMKLLQK KQSQLVQEKD HLRGEHSKAV LARSKLESLC BACU003300/1-532 YAELLEEHRN SQKQMKLLQK KQSQLVQEKD HLRGEHSKAV LARSKLESLC ENSBTAP00000017100/1-561 YAELLEEHRN SQKQMKLLQK KQSQLVQEKD HLRGEHSKAV LARSKLESLC bmy_14984T0/1-590 YAELLEEHRN SQKQMKLLQK KQSQLVQEKD HLRGEHSKAV LARSKLESLC ENSTTRP00000009205/1-549 YAELLEEHRN SQKQMKLLQK KQSQLVQEKD HLRGEHSKAV LARSKLESLC 251 300 ENSP00000362711/1-546 RELQRHNRSL K--------- ---------- ---------- -----EEGVQ BACU003300/1-532 RELQRHNRSL K--------- ---------- ---------- -----EEGVQ ENSBTAP00000017100/1-561 RELQRHNRSL K--------- ---------- ---------- -----EEGVQ bmy_14984T0/1-590 RELQRHNRSL KGGLLGENIP ELVGEPCESG QGTVDDGAGA DFSAQEEGVQ ENSTTRP00000009205/1-549 RELQRHNRSL ---------- ---------- ---------- -----EEGVQ 301 350 ENSP00000362711/1-546 RAREEEEKRK EVTSHFQVTL NDIQLQMEQH NERNSKLRQE NMELAERLKK BACU003300/1-532 RAREEEEKRK EVTSHFQVTL NDIQLQMEQH NERNSKLRQE NVELAERLKK ENSBTAP00000017100/1-561 RAREEEEKRK EVTSHFQVTL NDIQLQMEQH NERNSKLRQE NVELAERLKK bmy_14984T0/1-590 RAREEEEKRK EVTSHFQVTL NDIQLQMEQH NERNSKLRQE NVELAERLKK ENSTTRP00000009205/1-549 RAREEEEKRK EVTSHFQVTL NDIQLQMEQH NERNSKLRQE NVELAERLKK 351 400 ENSP00000362711/1-546 LIEQYELREE HIDKVFKHKD LQQQLVDAKL QQAQEMLKEA EERHQREKDF BACU003300/1-532 LIEQYELREE HIDKVFKHKD LQQQLVDAKL QQAQEMLKEA EERHQREKDF ENSBTAP00000017100/1-561 LIEQYELREE HIDKVFKHKD LQQQLVDAKL QQAQEMLKEA EERHQREKDF bmy_14984T0/1-590 LIEQYELREE HIDKVFKHKD LQQQLVDAKL QQAQEMLKEA EERHQREKDF ENSTTRP00000009205/1-549 LIEQYELREE HIDKVFKHKD LQQQLVDAKL QQAQEMLKEA EERHQREKDF 401 450 ENSP00000362711/1-546 L-LKEAVESQ RMCELMKQQE THLKQQLALY TEKFEEFQNT LSKSSEVFTT BACU003300/1-532 L-LKEAVESQ RMCELMKQQE THLKQQLALY TEKFEEFQNP LSKSSEVFTT ENSBTAP00000017100/1-561 L-LKEAVESQ RMCELMKQQE THLKQQLALY TEKFEEFQNT LSKSSEVFTT bmy_14984T0/1-590 VRLRPQ---- --GKLVSQQS WVKGPRLALY TEKFEEFQNT LSKSSEVFTT ENSTTRP00000009205/1-549 L-LKEAVESQ RMCELMKQQE THLKQQLALY TEKFEEFQNT LSKSSEVFTT 451 500 ENSP00000362711/1-546 FKQEMEKMTK KIKKLEKETT MYRSRWESSN KALLEMAEEK TVRDKELEGL BACU003300/1-532 FKQEMEKMTK KIKKLEKETT MYRSRWESSN KALLEMAEEK TLRDKELEGL ENSBTAP00000017100/1-561 FKQEMEKMTK KIKKLEKETT MYRSRWESSN KALLEMAEEK TLRDKELEGL bmy_14984T0/1-590 FKQEMEKMTK KIKKLEKETT MYRSRWESSN KALLEMAEEK TLRDKELEGL ENSTTRP00000009205/1-549 FKQEMEKMTK KIKKLEKETT MYRSRWESSN KALLEMAEEK TLRDKELEGL 501 550 ENSP00000362711/1-546 QVKIQRLEKL CRALQTERND LNKRVQDLSA GGQGSLTDSG PERRP----- BACU003300/1-532 QVKIQRLEKL CRALQSERND LNKRVQDLSA GGQAPLTDSG PERRPEAANT ENSBTAP00000017100/1-561 QVKIQRLEKL CRALQSERND LNKRVQDLSA GSQAPLTDSG PERRAEAANA bmy_14984T0/1-590 QVKIQRLEKL CRALQSERND LNKRVQDLSA GGQAPLTDSG PERRPEAANT ENSTTRP00000009205/1-549 QVKIQRLEKL CRALQSERND LNKRVQDLSA GGQAPLTDSG PERRP----- 551 600 ENSP00000362711/1-546 ------EGPG AQAPSSPRVT EAPCYPGAPS TEASGQTGPQ EPTSARA BACU003300/1-532 SKEQGGEGPR VQAPSSPRVT EAPCCPGAPS MEASGQTGPQ EPASITA ENSBTAP00000017100/1-561 SKEQGSEGPR VQTPSSPRAT EAPCCPGALS TDPSGQTGPQ EPTSITA bmy_14984T0/1-590 SKEQGGEGPR VQAPSSPRVT EAPCCPGAPS MEASGQTGPQ EPASITA ENSTTRP00000009205/1-549 ------EGPR VQAPSSPRVT EAPCCPGAPS MEASGQTGPQ EPASITA