KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:35 2014 Check: 00 .. Name: bmy_11191T0/1-402 Len: 486 Check: 5930 Weight: 1.00 Name: BACU004590/1-406 Len: 486 Check: 7919 Weight: 1.00 Name: ENSP00000265838/1-427 Len: 486 Check: 5941 Weight: 1.00 Name: ENSTTRP00000011402/1-426 Len: 486 Check: 2378 Weight: 1.00 Name: ENSBTAP00000017122/1-422 Len: 486 Check: 1975 Weight: 1.00 // 1 50 bmy_11191T0/1-402 ---------- -------MAG GRRGPRLLLE EAAGSAGEAG SGTRRW---- BACU004590/1-406 MSSKVSRDTL YEAVREVLHG SQRKPRKFLE MVELQISLKN CDPQKDKCFL ENSP00000265838/1-427 ---------- MAVLAALLRS GARS------ ---------- ---------- ENSTTRP00000011402/1-426 ---------- MAVLAALLRG GARG------ ---------- ---------- ENSBTAP00000017122/1-422 ---------- MPVLAALLR- ---------- ---------- ---------- 51 100 bmy_11191T0/1-402 ---------- RSLLSADDVG KI----FKYN NFYHLLSCQ- ---------E BACU004590/1-406 DTASPLGLSL QVPIIIQLIG SLRVLAWFKV HSIFGPVSSG QWEEDGNHLE ENSP00000265838/1-427 ---------- RSPLLRRLVQ EIR---YVER SYVSKPTLK- ---------E ENSTTRP00000011402/1-426 ---------- RSPLLRRQMQ EIR---YVER SYVSKPTLN- ---------E ENSBTAP00000017122/1-422 ---------- RGPLLQRRVQ EIR---YAER SYVSKPTLN- ---------E 101 150 bmy_11191T0/1-402 VVIVSAARTP IGSFLGSLSS LPATKLGSIA IQGAIEKAGI PKEEVKEAYM BACU004590/1-406 VVIVSAARTP IGSFLGSLSS LPATKLGSIA IQEAIEKA-- ---------- ENSP00000265838/1-427 VVIVSATRTP IGSFLGSLSL LPATKLGSIA IQGAIEKAGI PKEEVKEAYM ENSTTRP00000011402/1-426 VVIVSAARTP IGSFLGSLSS LPATKLGSIA IQGAIEKA-I PKEEVKEAYM ENSBTAP00000017122/1-422 VVIVSAIRTP IGSFLGSLSS LPATKLGSIA IQGAIEKAGI PKEEVKEAYM 151 200 bmy_11191T0/1-402 GNVLQGGEGQ APTRQAVLGA GLPISTPCTT VNKVCASGMK AIMMASQNLM BACU004590/1-406 ---------- ---------- GLPISTPCTT VNKVCASGMK AIMMASQNLM ENSP00000265838/1-427 GNVLQGGEGQ APTRQAVLGA GLPISTPCTT INKVCASGMK AIMMASQSLM ENSTTRP00000011402/1-426 GNVLQGGEGQ APTRQAVLGA GLPISTPCTT VNKVCASGMK AIMMASQNLM ENSBTAP00000017122/1-422 GNVLQGGEGQ APTRQAVLGA GLPISTPCTT INKVCASGMK AIMMASQNLM 201 250 bmy_11191T0/1-402 CGHQFFKTS- ---------- ---------- ---------- --------NF BACU004590/1-406 CGHQ------ ---------- ---------- ---------- ---------- ENSP00000265838/1-427 CGHQDVMVAG GMESMSNVPY VMNRGSTPYG GVKLEDLIVK DGLTDVYNKI ENSTTRP00000011402/1-426 CGHQDVMVAG GMESMSNVPY VMNRGATPYG GIKLEDLIVK DGLTDVYNKI ENSBTAP00000017122/1-422 CGHQDVMVAG GMESMSNVPY VMNRGATPYG GVKLEDLIVK DGLTDVYNKI 251 300 bmy_11191T0/1-402 YQGNCAENTA KKLNIARDEQ DTYAINSYTR SKAAWEAGKF GNEVVPVTIT BACU004590/1-406 --GNCAENTA KKLNIARDEQ DTYAINSYTR SKAAWEAGKF GNEVVPVTIT ENSP00000265838/1-427 HMGSCAENTA KKLNIARNEQ DAYAINSYTR SKAAWEAGKF GNEVIPVTVT ENSTTRP00000011402/1-426 HMGNCAENTS KKLNIARDEQ DTYAINSYTR SKAAWEAGKF GNEVVPVTIT ENSBTAP00000017122/1-422 HMGNCAENTA KKLNITREEQ DTYALNSYTR SKAAWEAGRF GNEVVPVTIT 301 350 bmy_11191T0/1-402 VKGKPDVVVK EDEEYKHVDF SRVPKLKTVF QKENGTVTAA NASTLNDGAA BACU004590/1-406 VKGKPDVVVK EDEEYKRVDF SRVPKLKTVF QKENGTVTAA NASTLNDGAA ENSP00000265838/1-427 VKGQPDVVVK EDEEYKRVDF SKVPKLKTVF QKENGTVTAA NASTLNDGAA ENSTTRP00000011402/1-426 VKGKPDVVVK EDEEYKRVDF SRVPKLKTVF QKENGTVTAA NASTLNDGAA ENSBTAP00000017122/1-422 VKGKPDVVVK EDEEYKRVDF SKIPKLKTVF QRENGTVTAA NASTLNDGAA 351 400 bmy_11191T0/1-402 AVVLMTADAA KRLSVKPLAR IAAFADAAVE PIDFPVAPAY AVPKVLKDAG BACU004590/1-406 AVVLMTADAA KRLSVKPLAR IAAFADAAVE PVDFPVAPAY AVPKVLKDAG ENSP00000265838/1-427 ALVLMTADAA KRLNVTPLAR IVAFADAAVE PIDFPIAPVY AASMVLKDVG ENSTTRP00000011402/1-426 AMVLMTADAA KRLSVKPLAR IAAFADAAVE PIDFPVAPAY AVPKVLKDTG ENSBTAP00000017122/1-422 AVVLMTADAA KRLNVKPLAR IAAFADAAVE PIDFPLAPAY AVPKVLKDAG 401 450 bmy_11191T0/1-402 LKKEDITMWE INEAFSVVVL ANIKMLEIDP QKVNVNGGAV SLGHPIGMSG BACU004590/1-406 LKKEDITMWE INEAFSVVVL ANIKMLEIDP QKVNVNGGAV SLGHPIGMSG ENSP00000265838/1-427 LKKEDIAMWE VNEAFSLVVL ANIKMLEIDP QKVNINGGAV SLGHPIGMSG ENSTTRP00000011402/1-426 LKKEDITMWE INEAFSVVVL ANIKMLEIDP QKVNINGGAV SLGHPIGMSG ENSBTAP00000017122/1-422 LKKEDITMWE VNEAFSVVVL ANIKMLEMDP QKVNINGGAV SLGHPIGMSG 451 500 bmy_11191T0/1-402 ARIVVHLAHA LKQGEYGLAS ICNGGGGASA MLIQKL BACU004590/1-406 ARIVVHLAHA LKQGEYGLAS ICNGGGGASA MLIQKL ENSP00000265838/1-427 ARIVGHLTHA LKQGEYGLAS ICNGGGGASA MLIQKL ENSTTRP00000011402/1-426 ARIVVHLAHA LKQGEYGLAS ICNGGGGASA MLIQKL ENSBTAP00000017122/1-422 ARIVVHLAHA LKQGEYGLAS ICNGGGGASA MLIQKL