KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:37 2014 Check: 00 .. Name: ENSP00000290219/1-337 Len: 364 Check: 742 Weight: 1.00 Name: ENSTTRP00000012248/1-311 Len: 364 Check: 3801 Weight: 1.00 Name: ENSBTAP00000017147/1-307 Len: 364 Check: 7866 Weight: 1.00 Name: bmy_01210T0/1-352 Len: 364 Check: 9888 Weight: 1.00 Name: BACU010399/1-351 Len: 364 Check: 5862 Weight: 1.00 // 1 50 ENSP00000290219/1-337 MRPTLLWSLL LLLGVFAAAA AAPPDPLSQL PAPQHPKIRL YNAEQVLSWE ENSTTRP00000012248/1-311 ---------- ---------- -----TPFQL PAPRNLKVHL YNAQQALSWE ENSBTAP00000017147/1-307 ---------- ---------- ---------- ---------- -------SWE bmy_01210T0/1-352 --------ML RLWPSFHEAW YELAAVL--L PAPRNLKVHL YNAQQALSWE BACU010399/1-351 MRPPPL--LL LLLLSGCDAA APPADTLFQL PAPRNLKVHL YNAQQALSWE 51 100 ENSP00000290219/1-337 PVALSNSTRP VVYQVQFKY- TDSKWFTADI MSIGVNCTQI TATECDFTAA ENSTTRP00000012248/1-311 PVSLNNDARP VVYQVQYKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000017147/1-307 PVSLDSDPRP VVYQVQYKYS TSSNWYDVNK EDSKVDCTNL TRTECDFTAN bmy_01210T0/1-352 PVSLSNDTRP VVYQVQYKYS TSSTWYDVNK KDSRVDCTNL TGTECNFTAN BACU010399/1-351 PMSLNNDTRP VVYQVQYKYS TSSTWYDVNK KDSRVDCTNL TRTECNFTAN 101 150 ENSP00000290219/1-337 SPSAGFPMDF NVTLRLRAEL GALHSAWVTM PWFQHYRNVT VGPPENIEVT ENSTTRP00000012248/1-311 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXX-XXXXT IGPPEDIWVT ENSBTAP00000017147/1-307 SLSEGFPRRF NISLRVRAKL GGLVSAWATA PWFEHYRNAT IGPPENIRVT bmy_01210T0/1-352 SLLEGFPRHF NISLRVRAKL GDLVSAWVKA PWFEHYRNAT IGPPEDIWVT BACU010399/1-351 SLLEGFPRHF NISLRVRAKL GDLVSAWVKA PWFEHYRNAT IGPPEDIWVT 151 200 ENSP00000290219/1-337 PGEGSLIIRF SSPFDIADTS TAFFCYYVH- YWEK------ --GGIQQVKG ENSTTRP00000012248/1-311 PEEGSLIISF SSPFDVP-AS VAFFWYYVY- YWEK------ --GGSKQVTH ENSBTAP00000017147/1-307 PEEGSLIIRL SAPFDVP-AT EAYFVYCVY- YWEK------ --AGAKQVTR bmy_01210T0/1-352 PEEGSLIIRF SSPFDVP-AS VAFFFVNLRK HWRRWKGLDH VYVGNFQVTR BACU010399/1-351 PEDGSLIIRF SSPFDVP-AS VAFFLYYVY- YWEK------ --AGIKQVTR 201 250 ENSP00000290219/1-337 PFRSNSISLD NLKPSRVYCL QVQAQLLWNK SNIFRVGHLS NISCYETMAD ENSTTRP00000012248/1-311 RVRSNFITLN DLKPLRVYCF QLKAELFLAK ENISRPGHLS NISCSETTVD ENSBTAP00000017147/1-307 PFRSNFITLN DLKPLRVYCF QVKAELFLTK ENISRPGHLS NISCCETAAD bmy_01210T0/1-352 PFRSNFITLN DLKPLRVYCF QVKAELFLAK ENISRPGHLS NISCSETTVD BACU010399/1-351 PFRSNFITLN DLKPLRVYCF QVKAELFLAK ENISRPGHLS NISCSKTTVD 251 300 ENSP00000290219/1-337 ASTELQQVIL ISVGTFSLLS VLAGACFFLV LKYRGLIKYW FHTPPSIPLQ ENSTTRP00000012248/1-311 AATKLQQVIL ISVGTFLLLS VLVGACLFLV LKYRGLVKYW FHSAPSIPSQ ENSBTAP00000017147/1-307 ASVKLQQDFL AAGTTFLVLS VVVGSCLFLV LRYRGLVKHW FHSPPSIPSQ bmy_01210T0/1-352 ASTKLQQVIL ISMGTFLLLS VVVGACLFLV LKYRGLVKYW FHSPPSIPSQ BACU010399/1-351 ASTKLQQVIL ISMGTFLLLS VVVGACLFLV LKYRGLVKYW FHSPPSIPSQ 301 350 ENSP00000290219/1-337 IEEYLKDPTQ PILEALDKDS SPKDDVWDSV SIISFPEKEQ EDVLQTL--- ENSTTRP00000012248/1-311 IEEYLKDPAQ PILDALDKDS SPKDDAWDSV SIVSFPENKQ EDILQTL--- ENSBTAP00000017147/1-307 IEEYLKDPAQ PILDALDKDS SPKDDTWDSV SVVTFPENEQ EGSPQSTLNQ bmy_01210T0/1-352 IEEYLKDPAQ PILDALDKDS SPKDDAWDSV SIVSFPENKQ EDILQSTLNQ BACU010399/1-351 IEEYLKDPAQ PILDALDKDS SPKDDAWDSV SVVSFPENKQ EDIHQSTLNQ 351 400 ENSP00000290219/1-337 ---------- ---- ENSTTRP00000012248/1-311 ---------- ---- ENSBTAP00000017147/1-307 SAGPSHQPTE GVLC bmy_01210T0/1-352 STNPSHQPVE GGP- BACU010399/1-351 SIDPSHQPVE GGP-