KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:00:37 2014  Check: 00 ..

 Name: bmy_07084T0/1-228         Len:    234  Check:  329  Weight:  1.00
 Name: ENSP00000256496/1-186     Len:    234  Check:  4552  Weight:  1.00
 Name: ENSBTAP00000017150/1-186  Len:    234  Check:  4552  Weight:  1.00
 Name: ENSTTRP00000013800/1-186  Len:    234  Check:  6426  Weight:  1.00

//


                          1                                                   50
bmy_07084T0/1-228         MLALISRLLD WFRSLFWKEE MELTLVGLQY SGKTTFVNVI ALLIFTRSPR 
ENSP00000256496/1-186     MLALISRLLD WFRSLFWKEE MELTLVGLQY SGKTTFVNVI ASGQFSEDMI 
ENSBTAP00000017150/1-186  MLALISRLLD WFRSLFWKEE MELTLVGLQY SGKTTFVNVI ASGQFSEDMI 
ENSTTRP00000013800/1-186  MLALISRLLD WFRSLFWKEE MELTLVGLQY SGKTTFVNVI ASGQFSEDMI 


                          51                                                 100
bmy_07084T0/1-228         GQDQVDCAAL T-GKVFFGV- -PGNGPNDLT SFNLYIFLSS CLCYMIDAAD 
ENSP00000256496/1-186     PTVGFNMRKV TKGNVTIKIW DIGGQPRFRS MWERYCRGVN AIVYMIDAAD 
ENSBTAP00000017150/1-186  PTVGFNMRKV TKGNVTIKIW DIGGQPRFRS MWERYCRGVN AIVYMIDAAD 
ENSTTRP00000013800/1-186  PTVGFNMRKV TKGNVTIKIW DIGGQPRFRS MWERYCRGVN AIVYMIDAAD 


                          101                                                150
bmy_07084T0/1-228         REKIEASRNE LHNLLDKPQL QGIPVLVLGN KRDLPNALDE KQLIEKMNLS 
ENSP00000256496/1-186     REKIEASRNE LHNLLDKPQL QGIPVLVLGN KRDLPNALDE KQLIEKMNLS 
ENSBTAP00000017150/1-186  REKIEASRNE LHNLLDKPQL QGIPVLVLGN KRDLPNALDE KQLIEKMNLS 
ENSTTRP00000013800/1-186  REKIEASRNE LHXXXXXXXX XXXXVLVLGN KRDLPNALDE KQLIEKMNLS 


                          151                                                200
bmy_07084T0/1-228         AIQDREICCY SISCKEKDNI GQGMKNSRID TDIYISHFSG LFNIQNLEEA 
ENSP00000256496/1-186     AIQDREICCY SISCKEKDNI ---------- ---------- ---------- 
ENSBTAP00000017150/1-186  AIQDREICCY SISCKEKDNI ---------- ---------- ---------- 
ENSTTRP00000013800/1-186  AIQDREICCY SISCKEKDNI ---------- ---------- ---------- 


                          201                                                250
bmy_07084T0/1-228         EASPEVFQSF LAIILELLSV PLKYFPEYGP S--- 
ENSP00000256496/1-186     ---------- --------DI TLQWLIQHSK SRRS 
ENSBTAP00000017150/1-186  ---------- --------DI TLQWLIQHSK SRRS 
ENSTTRP00000013800/1-186  ---------- --------DI TLQWLIQHSK SRRS