KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:37 2014 Check: 00 .. Name: ENSTTRP00000013801/1-590 Len: 702 Check: 7410 Weight: 1.00 Name: ENSP00000256497/1-657 Len: 702 Check: 6169 Weight: 1.00 Name: ENSBTAP00000017152/1-658 Len: 702 Check: 4538 Weight: 1.00 Name: bmy_07083T0/1-701 Len: 702 Check: 7298 Weight: 1.00 Name: BACU020221/1-559 Len: 702 Check: 298 Weight: 1.00 // 1 50 ENSTTRP00000013801/1-590 ---------- ---------- ---------- ---------- ---------- ENSP00000256497/1-657 MQWRALVLGL VLLRLGLHGV LWLVFGLGPS MGFYQRFPLS FGFQRLRSPD ENSBTAP00000017152/1-658 MQWRALVLGL VLLRLGLHGV LWLVFGLGPS MGFYQRFPLS FGFQRLRGPD bmy_07083T0/1-701 MQWRALVLGL VLLRLGLHGV LWLVFGLGPS MGFYQRFPLS FGFQRLRGPD BACU020221/1-559 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013801/1-590 ---------- ---------- GPSWLQPQVP GAAAG-RRRD PRRPGPDVGG ENSP00000256497/1-657 GPASPTSGPV GR---PGGVS GPSWLQPPGT GAAQS-PRKA PRRPGPGMCG ENSBTAP00000017152/1-658 GSASPASGPA DR---PGGLS GPSWLQPPAP GAAEGKRRRA PRRPGQGVCG bmy_07083T0/1-701 GPASPASGPA GRPGTPGGPS GPSWLQPQVP GAAAG-RRRA PRRPGPDVCG BACU020221/1-559 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013801/1-590 PGHWGYVLGG RGRGRDEYEK RYSGAFPPQL RAQMRDLARG KFVFGYDNYM ENSP00000256497/1-657 PANWGYVLGG RGRGPDEYEK RYSGAFPPQL RAQMRDLARG MFVFGYDNYM ENSBTAP00000017152/1-658 PAHWGYVLGG RGRGRDEYEK RYSSAFPPQL RAQMRDLARG MFVFGYDNYM bmy_07083T0/1-701 PGHWGYVLGG RGRGRDEYEK RYSGAFPPQL RAQMRDLARG MFVFGYDNYM BACU020221/1-559 --HWGYVLGG RGRGRDEYEK RYSGAFPPQL RAQMRDLARG MFVFGYDNYM 151 200 ENSTTRP00000013801/1-590 AHAFPEDELN PIHCRGRGPD RGDPSNLNIN DVLGNYSLTL VDALDTLAIM ENSP00000256497/1-657 AHAFPQDELN PIHCRGRGPD RGDPSNLNIN DVLGNYSLTL VDALDTLAIM ENSBTAP00000017152/1-658 AHAFPQDELN PIHCRGRGPD RGDPSNLNIN DVLGNYSLTL VDALDTLAIM bmy_07083T0/1-701 AHAFPEDELN PIHCRGRGPD RGDPSNLNIN DVLGNYSLTL VDALDTLAIM BACU020221/1-559 AHAFPEDELN PIHCRGRGPD RGDPSNLNIN DVLGNYSLTL VDALDTLAIM 201 250 ENSTTRP00000013801/1-590 GNSSEFQKAV KLVINTVSFD KDSTVQVFEA TIRVLGSLLS AHRIITDSKQ ENSP00000256497/1-657 GNSSEFQKAV KLVINTVSFD KDSTVQVFEA TIRVLGSLLS AHRIITDSKQ ENSBTAP00000017152/1-658 GNSSEFQKAV KLVINTVSFD KDSTVQVFEA TIRVLGSLLS AHRIITDSKQ bmy_07083T0/1-701 GNSSEFQKAV KLVINTVSFD KDSTVQVFEA TIRVLGSLLS AHRIITDSKQ BACU020221/1-559 GNSSEFQKAV KLVINTVSFD KDSTVQVFEA TIRVLGSLLS AHRIITDSKQ 251 300 ENSTTRP00000013801/1-590 PFGDMTIKDY DNELLHMAHD LAVRLLPAFE NTRTGIPYPR VNLKTGVPPD ENSP00000256497/1-657 PFGDMTIKDY DNELLYMAHD LAVRLLPAFE NTKTGIPYPR VNLKTGVPPD ENSBTAP00000017152/1-658 PFGDMTIKDY DNELLHMAHD LAVRLLPAFE NTKTGIPYPR VNLKTGVPPD bmy_07083T0/1-701 PFGDMTIKDY DNELLHMAHD LAVRLLPAFE NTKTGIPYPR VNLKTGVPPD BACU020221/1-559 PFGDMTIKDY DNELLHMAHD LAVRLLPAFE NTKTGIPYPR VNLKTGVPPD 301 350 ENSTTRP00000013801/1-590 SNNETCTAGA GSLLVEFGIL SRLLGDSTFE WVARRAVKAL WNLRSNDTGL ENSP00000256497/1-657 TNNETCTAGA GSLLVEFGIL SRLLGDSTFE WVARRAVKAL WNLRSNDTGL ENSBTAP00000017152/1-658 SNNETCTAGA GSLLVEFGIL SRLLGDSTFE WVARRAVKAL WSLRSSDTGL bmy_07083T0/1-701 SNNETCTAGA GSLLVEFGIL SRLLGDSTFE WVARRAVKAL WNLRSNDTGL BACU020221/1-559 SNNETCTAGA GSLLVEFGIL SRLLGDSTFE WVARRAVKAL WNLRSNDTGL 351 400 ENSTTRP00000013801/1-590 L--------- ---------- ---------- ---------- --GNVVNIQT ENSP00000256497/1-657 L--------- ---------- ---------- ---------- --GNVVNIQT ENSBTAP00000017152/1-658 L--------- ---------- ---------- ---------- --GNVVNIQT bmy_07083T0/1-701 LGVGHPVETL YVQEAWATHA ADRTDKDVRA THSSLLFPVR DEGNVVNIQT BACU020221/1-559 L--------- ---------- ---------- ---------- --GNVVNIQT 401 450 ENSTTRP00000013801/1-590 GHWVGKQSGL GAGLDSFYEY LLKSYILFGE KEDLEMFNAV YKSIQNYLRR ENSP00000256497/1-657 GHWVGKQSGL GAGLDSFYEY LLKSYILFGE KEDLEMFNAA YQSIQNYLRR ENSBTAP00000017152/1-658 GHWVGKQSGL GAGLDSFYEY LLKSYILFGE KEDLEMFNAA YQSIQNYLRR bmy_07083T0/1-701 GHWVGKQSGL GAGLDSFYEY LLKSYILFGE KEDLEMFNAA YKSIQNYLRR BACU020221/1-559 GHWVGKQSGL GAGLDSFYEY LLKSYILFGE KEDLEMFNAA YKSIQNYLRR 451 500 ENSTTRP00000013801/1-590 GREACNEGEG DPPLYVNVNM FSGQLMNTWI DSLQAFFPGL QVLIGDVEDA ENSP00000256497/1-657 GREACNEGEG DPPLYVNVNM FSGQLMNTWI DSLQAFFPGL QVLIGDVEDA ENSBTAP00000017152/1-658 GREACNEGEG DPPLYVNVNM FSGQLMNTWI DSLQAFFPGL QVLIGDVEDA bmy_07083T0/1-701 GREACNEGEG DPPLYVNVNM FSGQLMNTWI DSLQAFFPGL QVLIGDVEDA BACU020221/1-559 GREACNEGEG DPPLYVNVNM FSGQLMNTWI DSLQAFFPGL QVLIGDVEDA 501 550 ENSTTRP00000013801/1-590 ICLHAFYYAI WKRYGALPER YNWQLQAPDV LFYPLRPELV ESTYLLYQAT ENSP00000256497/1-657 ICLHAFYYAI WKRYGALPER YNWQLQAPDV LFYPLRPELV ESTYLLYQAT ENSBTAP00000017152/1-658 ICLHAFYYAI WKRYGALPER YNWQLQAPDV LFYPLRPELV ESTYLLYQAT bmy_07083T0/1-701 ICLHAFYYAI WKRYGALPER YNWQLQAPDV LFYPLRPELV ESTYLLYQAT BACU020221/1-559 ICLHAFYYAI WKRYGALPER YNWQLQAPDV FFYPLRPELV ESTYLLYQVL 551 600 ENSTTRP00000013801/1-590 KNPFYLHVGM DILQSLEKYT KVKCGYATLH HVIDKSKEDR MESFFLSETC ENSP00000256497/1-657 KNPFYLHVGM DILQSLEKYT KVKCGYATLH HVIDKSTEDR MESFFLSETC ENSBTAP00000017152/1-658 KNPFYLHVGM DILQSLEKHT KVKCGYATLH HVIDKSKEDR MESFFLSETC bmy_07083T0/1-701 RNPFYLHVGM DILQSLEKYT KVKCGYATLH HVIDKSKEDR MESFFLSETC BACU020221/1-559 ENPFYLHVGM DILQSLEKHT KVKCGYATLH HVIDKSTEDR MESFFLSETC 601 650 ENSTTRP00000013801/1-590 KYLYLLFDEE NPVHKSGTRY MFTTEGXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000256497/1-657 KYLYLLFDED NPVHKSGTRY MFTTEGHIVS VDEHLRELPW KEFFSEEGGQ ENSBTAP00000017152/1-658 KYLYLLFDEE NPVHKSGTRY MFTTEGHIIS VDEHLRESPW KEFFSEEGGP bmy_07083T0/1-701 KYLYLLFDEE NPVHKSGTRY MFTTEGHIIS VDEHLRESPW KEFFSEEGGQ BACU020221/1-559 KYLYLLFDEE NPVHKSGTRY MFTTEGHIIS VDEHLRESPW KEFFSEEGGQ 651 700 ENSTTRP00000013801/1-590 XXXXXXXXXX XXXXXXXXXX XXXCNRVPDE RRYSLPLKSV YMRQIDQMVG ENSP00000256497/1-657 DQGGKSVHRP KPHELKVINS SSNCNRVPDE RRYSLPLKSI YMRQIDQMVG ENSBTAP00000017152/1-658 DQVGKSGHRP KPQELNVINS SSNCNRVPDE RRYALPLKSI YMRQIDQMVG bmy_07083T0/1-701 DQVGKSGHRP RPHELKVINS SSNCNRVPDE RRYSLPLKSV YMRQIDQMVG BACU020221/1-559 GPVGKSGHRP RPHELKVINS SSNCNRVPDE RRYSLPLKSV YMRQIDQMVG 701 750 ENSTTRP00000013801/1-590 LI ENSP00000256497/1-657 LI ENSBTAP00000017152/1-658 LI bmy_07083T0/1-701 LI BACU020221/1-559 LI