KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:38 2014 Check: 00 .. Name: ENSP00000285667/1-471 Len: 485 Check: 9199 Weight: 1.00 Name: ENSBTAP00000017155/1-471 Len: 485 Check: 9869 Weight: 1.00 Name: BACU000080/1-286 Len: 485 Check: 770 Weight: 1.00 Name: ENSTTRP00000007013/1-462 Len: 485 Check: 8604 Weight: 1.00 Name: bmy_20504T0/1-442 Len: 485 Check: 1496 Weight: 1.00 // 1 50 ENSP00000285667/1-471 ---------- ----MAREMT ILGSAVLTLL LAGYLAQQYL PLPTPKVIGI ENSBTAP00000017155/1-471 ---------- ----MAGEMT ILGSAVLTLL LAGYLAQQYL PLPTPKVIGI BACU000080/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007013/1-462 ---------- ---------- ---SAVLTLL LAGYFAQQYL PLPTPKVIGI bmy_20504T0/1-442 MLDFERARYL FDVQSSVLST NPGSAVLTLL LAGYFAQQYL PLPTPKVIGI 51 100 ENSP00000285667/1-471 DLGTTYCSVG VFFPGTGKVK VIPDENGHIS IPSMVSFTDN DVYVGYESVE ENSBTAP00000017155/1-471 DLGTTYCSVG VFFPGTGKVK VIPDENGHIS IPSMVSFTDD DVYVGYESLE BACU000080/1-286 ---------- ----MAGEMT IL-------- ---------- ---------- ENSTTRP00000007013/1-462 DLGTTYCSVG VFFPGTGKVK VIPDENGHVS LPSMVSFTDN DVYVGYESLE bmy_20504T0/1-442 DLGTTYCSVG VFFPGTGKVK VIPDENGHVS LPSMVSFTDN DVY------- 101 150 ENSP00000285667/1-471 LADSNPQNTI YDAKRFIGKI FTAEELEAEI GRYPFKVLNK NGMVEFSVTS ENSBTAP00000017155/1-471 LADSNPQNTI YDAKRFIGKV FTPEELEAEI GRYPFKVLNK NGMVEFSVTS BACU000080/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007013/1-462 LADSNPQNTI YDAKRFIGKI FTPEELEAEI GRYPFKVLNK NGMVEFSVTS bmy_20504T0/1-442 ---------- ---------- ---------- ------VLNK NGMVEFSVTS 151 200 ENSP00000285667/1-471 NETITVSPEY VGSRLLLKLK EMAEAYLGMP VANAVISVPA EFDLKQRNST ENSBTAP00000017155/1-471 NETITVSPEY VGSRLLLKLK EMAEEYLGMP VANAVISVPA EFDLKQRNST BACU000080/1-286 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007013/1-462 NETITVSPEY VGSRLLLKLK EMAEEYLGMP VANAVISVPA EFDLKQRNST bmy_20504T0/1-442 NETITVSPEY VGSRLLLKLK EMAEEYLGMP VANAVISVPA EFDLKQRNST 201 250 ENSP00000285667/1-471 IEAANLAGLK ILRVINEPTA AAMAYGLHKA DVFHVLVIDL GGGTLDVSLL ENSBTAP00000017155/1-471 IQAANLAGLK ILRVINEPTA AAMAYGLHKA EVFHVLVIDL GGGTLDVSLL BACU000080/1-286 -------GLK ILRVINEPTA AAMAYGLHKA DVFHVLVIDL GGGTLDVSLL ENSTTRP00000007013/1-462 IQAANLAGLK ILRVINEPTA AAMAYGLHKA DVFHVLVIDL GGGTLDVSLL bmy_20504T0/1-442 IQAANLAGLK ILRVINEPTA AAMAYGLHKA DVFHVLVIDL GGGTLDVSLL 251 300 ENSP00000285667/1-471 NKQGGMFLTR AMSGNNKLGG QDFNQRLLQY LYKQIYQTYG FVPSRKEEIH ENSBTAP00000017155/1-471 NKQGGMFLTR AMSGNNKLGG QDFNQRLLQY LYKQIYQTYG FLPSRKEEIH BACU000080/1-286 NKQGGMFLTR AMSGNNKLGG QDFNQRLLQY LYKQIYQTYG FLPSRKEEIH ENSTTRP00000007013/1-462 NKQGGMFLTR AMSGNNKLGG QDFNQRLLQY LYKQIYQTYG FLPSRKEEIH bmy_20504T0/1-442 NKQGGMFLTR AMSGNNKLGG QDFNQRLLQY LYKQIYQTYG FLPSRKEEIH 301 350 ENSP00000285667/1-471 RLRQAVEMVK LNLTLHQSAQ LSVLLTVEEQ DRKEPHSSDT ELPKDKLSSA ENSBTAP00000017155/1-471 RLRQAVEMVK LNLTLHETAQ MSVLLTVEEN DRKGPPTSDS ELPKDKFSQA BACU000080/1-286 RLRQAVEMVK LNLTLHQTAQ MSVLLTVEEK DGKEPQSSDT ELPKDELSPA ENSTTRP00000007013/1-462 RLRQAVEMVK LNLTLHQTAQ MSVLLTVEKK DGKEPQSSDT ELPKDELSPA bmy_20504T0/1-442 RLRQAVEMVK LNLTLHQTAQ MSVLLTVEEK DGKEPQSSDT EPPKDELSPA 351 400 ENSP00000285667/1-471 DDHRVNSGFG RGLSDKKSGE SQVLFETEIS RKLFDTLNED LFQKILVPIQ ENSBTAP00000017155/1-471 NDPHVDSMFG ANLSEKKNGE GQVLFETEIS RKLFDTLNED LFQKILVPIQ BACU000080/1-286 DSPHVNSMFG ASLPEKKNGE SQVLFETEIS RKLFDTLNED LFQKILVPIQ ENSTTRP00000007013/1-462 DSPHVNSMFG ASLPEKKNGE SQVLFETEIS RKLFDTLNED LFQKILVPIQ bmy_20504T0/1-442 DSPHVNSMFG ASLPEKKNGE SQVLFETEIS RKLFDTLNED LFQKILVPIQ 401 450 ENSP00000285667/1-471 QVLKEGHLEK TEIDEVVLVG GSTRIPRIRQ VIQEFFGKDP NTSVDPDLAV ENSBTAP00000017155/1-471 QVLKEGHLEK TEIDEVVLVG GSTRIPRIRQ VIQEFFGKDP NTSVDPDLAV BACU000080/1-286 QVLKEGHLEK TEIDEVVLVG GSTRIPRIRQ VIQEFFGKDP NTSVDPDLAV ENSTTRP00000007013/1-462 QVLEEGHLEK TEIDEVVLVG GSTRIPRIRQ VIQEFFGKDP NTSVDPDLAV bmy_20504T0/1-442 QVLKEGHLEK TEIDEVVLVG GSTRIPRIRQ VIQEFFGKDP NTSVDPDLAV 451 500 ENSP00000285667/1-471 VTGVAIQAGI DGGSWPLQVS ALEIPNKHLQ KTNFN ENSBTAP00000017155/1-471 VTGVAIQAGI DGGSWPLQVS ALEIPNKHLQ KTNFN BACU000080/1-286 VTGVAIQAGI DGGSWPLQVS ALEIPNKHLQ KTNFN ENSTTRP00000007013/1-462 VTGVAIQAGI DGGSWPLQVS ALEIPSKHLQ KTNFN bmy_20504T0/1-442 VTGVAIQAGI DGGSWPLQVS ALEIPSKHLQ KTNFN