KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:38 2014 Check: 00 .. Name: ENSP00000359600/1-636 Len: 719 Check: 5965 Weight: 1.00 Name: ENSBTAP00000017157/1-548 Len: 719 Check: 5517 Weight: 1.00 Name: ENSTTRP00000000005/1-643 Len: 719 Check: 338 Weight: 1.00 Name: bmy_16491T0/1-636 Len: 719 Check: 742 Weight: 1.00 Name: BACU004617/1-590 Len: 719 Check: 3392 Weight: 1.00 // 1 50 ENSP00000359600/1-636 ---------- ---------- ---------- ---------- ------MEKA ENSBTAP00000017157/1-548 ---------- ---------- ---------- ---------- ------MEET ENSTTRP00000000005/1-643 ---------- ---------- ---------- ---------- ------MEKP bmy_16491T0/1-636 MSKKSLPLFP IRVPEAEGAS VTIRGKISAY VENLLWKPPI NPFPEFMEKP BACU004617/1-590 ---------- ---------- ---------- ---------- ------MEKP 51 100 ENSP00000359600/1-636 VNDGSHSEEL FCHLKTISEK EDLPRCTSES HLSCLKQDIL NEKTELEATL ENSBTAP00000017157/1-548 ANDGSHSEEL FSHFESRSEK EGLPQDASES HLSCLKQDIQ NEKTELEALF ENSTTRP00000000005/1-643 TNDGSHSEEL FSHFKSIPEK EHLPRHASES HLSCLKQDIL IEKTKLEATF bmy_16491T0/1-636 ANDGSHSEEL FSHFKSIPEK EHLPRHASES HLSCLKQDIL NEKTKLEATF BACU004617/1-590 ANDGSHSEEL FSHFKSIPEK EHLPRHASES HLSCLKQDIL NEKTKLEATF 101 150 ENSP00000359600/1-636 KEAELVTHSV ELLLPLFKDT IEKINFENAN LSALNLKISE QKEILIKELD ENSBTAP00000017157/1-548 KEAELATCSA ELLLPLFKDT IEEISFEN-- ---------- ---------- ENSTTRP00000000005/1-643 KEAELATCSV ELLLPLFKDT IEEISFENTD LSASNLKISK QKEILRKELD bmy_16491T0/1-636 KEAELATCSV ELLLPLFKDT IEEISFENTD LSASNLKISK QKEILRKELD BACU004617/1-590 KEAELATCSV ELLLPLFKDT IEEISFENTD LSASNLKISK QKEILRKELD 151 200 ENSP00000359600/1-636 TFKSVKLALE HLLRKRDYKQ TGDNLSSMLL ENLTDNESEN TNLKKKVFEK ENSBTAP00000017157/1-548 ---------- ---------- RGESLSN-LL EKLTDNESEN INLKNKVLEK ENSTTRP00000000005/1-643 SFKDLKQTLE HLLRKTEHQQ RGDSLSS-LL DKLADNESEN TNLKTKVLEK bmy_16491T0/1-636 TFKLLKQTLE HLLRKTEHQQ RGDSLSN-LL EKLADNESEN TNLRTKVLEK BACU004617/1-590 TFKLLKQTLE HLLRKTEHQQ RGDSLSN-LL EKLADNESEN TNLKTKVLEK 201 250 ENSP00000359600/1-636 EAHIQELSCL FQSEKANTLK ANRFSQSVKV VHERLQIQIH KREAENDKLK ENSBTAP00000017157/1-548 ETYIQELSSL FQNEKANALK ASRFSQSVKV VHERLQSQIH KKEAENEKLK ENSTTRP00000000005/1-643 ETYIQELSCL FQNEKANALK ASRLSQSVKV VHERLQFQIH KKEAENDKLK bmy_16491T0/1-636 ETYIQELSCL FQNEKANALK ASRFSQSVKV VHERLQFQIH KKEAENDKLK BACU004617/1-590 ETYIQELSCL FQNEKANALK ASRFSQSVKV VHERLQFQIH KKEAENDKLK 251 300 ENSP00000359600/1-636 EYVKSLETKI AKWNLQSRMN KNEAIVMKEA SRQKTVALKK ASKVYKQRLD ENSBTAP00000017157/1-548 EHIKSLETQI SEWNLQLKKN KYEAVAMKES SRQKTIALKK ASKIYKQRIE ENSTTRP00000000005/1-643 EHIKSLETKI SEWNLQLKKS THEAVTMKES SRQKAIALKK ASKIYKQRIK bmy_16491T0/1-636 EHIKSLETKI SEWNLQLKKS THEAVTMKES SRQKALALKK ASKIYKQRIK BACU004617/1-590 EHIKSLETKI SEWNLQLKKS THEAVTMKES SRQKAIALKK ASKIYKQRIK 301 350 ENSP00000359600/1-636 HFTGAIEKLT SQIRDQEAKL SETISASNAW KSHYEKIVIE KTELEVQIET ENSBTAP00000017157/1-548 HFTGDMENLT SQIREQEAKL SETVSASNAW KSHYEKIVIE KTELEVQIET ENSTTRP00000000005/1-643 HFTGDVENLT SQIREQEAKL SEIVSASNVW KSHYEKIAIE KTELEVQIET bmy_16491T0/1-636 HFTGDMENLT SQIREQEAKL SETVSASNAW KSHYEKIVIE KTELEFQIET BACU004617/1-590 HFTGDMENLT SQIREQEAKL SETVSASNAW KSHYEKIVIE KTELEFQIET 351 400 ENSP00000359600/1-636 MKKQIINLLE DLKKMEDHGK NSCEEILRKV HSIEYENETL NLENTKLKLR ENSBTAP00000017157/1-548 MKKQIINLLE DLKKMEEHGK ISCEEILRKL HSIEYENETL NLENTKL--- ENSTTRP00000000005/1-643 MKKQIIHLLE DLKKMEDRGK NSCEEILRKL HSIEYENETL NLENTKL--- bmy_16491T0/1-636 XKKQIINLLE DLKKMEDHGK NSCEEILRKL HSIEYENETL NLENTKL--- BACU004617/1-590 MKKQIINLLE DLKKMEDHGK NSCEEILRKL HSIEYENETL NLENTKL--- 401 450 ENSP00000359600/1-636 FPCRITESKN MNILIVLDML CYISSEKTTL AALKDEVVSV ENELSELQEV ENSBTAP00000017157/1-548 ---------- ---------- ------KTTL ATLKDEIASV ENELLELQEV ENSTTRP00000000005/1-643 ---------- ---------- ------KTTL AALKDEIASV ENELLELQEV bmy_16491T0/1-636 ---------- ---------- ------KTTL AALKEEIASV ENELLELQEV BACU004617/1-590 ---------- ---------- ------KTTL AALKDEIASV ENELLELQEV 451 500 ENSP00000359600/1-636 EKKQKTLIEM YKTQVQKLQE AAEIVKSRCE NLLHKNNQIT KTKNKNVEKM ENSBTAP00000017157/1-548 EKQQKTLIEV YKTQFKKAEL SSELRKDRVK SLLSKNSLSS KNSNKTLKT- ENSTTRP00000000005/1-643 EKQQKALIEV YKAQIQKLQE AAEMVESRCE SLLQENNLIT KNKNKKLKKV bmy_16491T0/1-636 EKQQKTLIEV YKTQIQKLQE AAEIVESRCE NLLQENNLIT KNKNKKLKK- BACU004617/1-590 EKQQKTLIEV YKTQIQKLQE AAEIVESRCK NLLQENNLIT KNKNKKLKK- 501 550 ENSP00000359600/1-636 RGQMESHLKE LERVCDSLTA AERRLHECQE SLQCCKGKCA DQEHTIRELQ ENSBTAP00000017157/1-548 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000005/1-643 RGQMESHLKE LEHDRDSLTA AEQRLHECQE SLQHHKGKCA DQAHAIRELQ bmy_16491T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU004617/1-590 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000359600/1-636 GQVDGNHNLL TKLSLEEENC LIQLKCENLQ QKLEQMDAEN KELEKKLANQ ENSBTAP00000017157/1-548 --VDENHSLL TKLSLEEENY LIQLKCENLK QKLEQMDAEN RELEKKLANQ ENSTTRP00000000005/1-643 GQVDENHDLL TKLSLEEENY LIQLKCENLK QKLEQMDAEN KELEKKLANQ bmy_16491T0/1-636 --VDENHDLL TKLSLEEENY LIQLKCENLK QKLEQMDAEN KELEKKLANQ BACU004617/1-590 --VDENHDLL TKLSLEEENY LIQLKCENLK QKLEQMDAEN KELEKKLANQ 601 650 ENSP00000359600/1-636 EECLKHSNLK FKEKSAEYTA LARQLEAALE EGRQKVAEEI EKMSSRESAL ENSBTAP00000017157/1-548 EECLKHSNLK FKEKSAEYTA LARQLEAALE EGRQKVSEEI EKMSSRERAL ENSTTRP00000000005/1-643 EGCLKHTNLE FKEKSAEYRA LARQLEAAVE EGRQKVSEEI EKMSSRERAL bmy_16491T0/1-636 EGCLKHTNLE FKEKSAEYRA LARQLEAALE EGRQKVSEEI EKMSSREKAL BACU004617/1-590 EGRLKHTNLE FKEKSAEYRA LARQLEAALE EGRQKVSEEI EKMSSRERAL 651 700 ENSP00000359600/1-636 QIKILDLETE LRKKNEEQNQ LVCKMNSDPE TP-------- ---------- ENSBTAP00000017157/1-548 QVKIVDLENE LRKKNEEQNQ LVCKMNSKAQ HQEVCLKEIQ HSLEKSENQN ENSTTRP00000000005/1-643 QIKILDLETE LRKKNEEQNQ LICKMNSKAQ HQEVCLKEIQ HSLEKSENQN bmy_16491T0/1-636 QIKILDLETE LRKKNEEQNQ LVCKMNSKAQ HQEVCLKEIQ RXLEKSENQN BACU004617/1-590 QIKILDLETE LRKKNEEQNQ LVCKMNSKAQ HQEVCLKEIQ RSLEKSENQN 701 750 ENSP00000359600/1-636 ---------- --------- ENSBTAP00000017157/1-548 ESIKNYLQFL KTSYVTMFG ENSTTRP00000000005/1-643 ESIKNYLQFL KTSYVTMFG bmy_16491T0/1-636 ESIKNYLQFL KTSYVTMFG BACU004617/1-590 ESIKNYLQFL KTSYVTMFG