KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:40 2014 Check: 00 .. Name: ENSP00000312599/1-260 Len: 275 Check: 1861 Weight: 1.00 Name: ENSBTAP00000017169/1-254 Len: 275 Check: 4884 Weight: 1.00 Name: BACU011155/1-163 Len: 275 Check: 1756 Weight: 1.00 Name: ENSTTRP00000010939/1-254 Len: 275 Check: 3362 Weight: 1.00 Name: bmy_02182T0/1-237 Len: 275 Check: 9282 Weight: 1.00 // 1 50 ENSP00000312599/1-260 MLFLALGSPW AVELPLCGRR TALCAAAALR GPRASVSRAS SSSGPSGPVA ENSBTAP00000017169/1-254 MLFLALGGPW AAGLRLSGKR TALWASSALR DPRAAVSRAA SCRGSSGRVG BACU011155/1-163 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010939/1-254 MLLLALGGPW AAGLRLGGKR TAPWAATALR GPRAAVCRAA SCRGSSGRGG bmy_02182T0/1-237 MLLLALGGPW AAGLRLGGKR TAPWAATALR GPRAA----- ---------- 51 100 ENSP00000312599/1-260 GWSTGPSGAA RLLRRPGRAQ IPVYWEGYVR FLNTPSDKSE DGRLIYTGNM ENSBTAP00000017169/1-254 G--TGLSAAA PVLRR-VRAQ IPVCWERGVR CSHTQLDKSE DGRLIYTGNL BACU011155/1-163 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010939/1-254 G--AGLSAAA TLLPCRVRA- IPVSWERCVR CLHTQLEKSE DGRLIYTGNL bmy_02182T0/1-237 ---------- ---------- IPVCWERCVR CLHTQLEKSE DGRLIYTGNL 101 150 ENSP00000312599/1-260 ARAVF----- ---------- GVKCFSYSTS LIGLTFLPYI FTQNNAISES ENSBTAP00000017169/1-254 ARTVF----- ---------- GVKCFSYSTS LISLAFLPYI FAQNNVIFGS BACU011155/1-163 ---------M GEYLLGVVIS GVKCFSYSTS LISLAFLPYI FAQNNIIFGS ENSTTRP00000010939/1-254 ARTVF----- ---------- GVKCFSYSTS LISLAFLPYI FAQNNIIFGS bmy_02182T0/1-237 ARTVFEEKNM GEYLLGVVIS GVKCFSYSTS LISLAFLPYI FAQNNIIFGS 151 200 ENSP00000312599/1-260 VPLPIQIIFY GIMGSFTVIT PVLLHFITKG YVIRLYHEAT TDTYKAITYN ENSBTAP00000017169/1-254 --LPLQILFY GTIGSFTVIT PALLHFLTKG YVIRLYHEAR TDTYKAITYS BACU011155/1-163 --LPLQILFY SIIGSFTVIT PALLHFLTKG YVIRLYHEAT TDTYKAITYN ENSTTRP00000010939/1-254 --LPLQILFY GIIGSFTVIT PTLLHFLTKG YVVRLYHEAT TDTYKAITYN bmy_02182T0/1-237 --LPLQILFY GIIGSFTVIT PTLLHFLTKG YVIRLYHEAT TDTYKAITYN 201 250 ENSP00000312599/1-260 AMLAETSTVF HQNDVKIPDA KHVFTTFYAK TKSLLVNPVL FPNREDYIHL ENSBTAP00000017169/1-254 VVLSEKSTVF HQNDVKIPNS THVFTTFYAK TKSLLVNPAL FPNPEDYNHL BACU011155/1-163 VVLLETSTVF HQNDVKIPNS THVFTTFYDK TKSLLVNPGL FPNPEDYNHL ENSTTRP00000010939/1-254 VVLLETSTVF HQNDVTIPNS THVFTTFYAK TKSLLVNPAL FPNPEDYNHL bmy_02182T0/1-237 VVLLETSTVF HQNDVKIPNS THVFTTFYAK TKSLLVNPAL FRNPEDYNHL 251 300 ENSP00000312599/1-260 MGYDKEEFIL YMEETSEEKR HKDDK ENSBTAP00000017169/1-254 MGYDK-PFTF DLEEASEKKQ LKEEK BACU011155/1-163 MGYDK-PFTF DVEEASEKKQ LKEEK ENSTTRP00000010939/1-254 MGYDK-PFTF DVEEASEKKQ LKEEK bmy_02182T0/1-237 MGYDK-PFTF DVEEASEKKQ LKEEK