KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:00:41 2014 Check: 00 .. Name: ENSP00000352185/1-1096 Len: 1185 Check: 6941 Weight: 1.00 Name: ENSBTAP00000017171/1-1132 Len: 1185 Check: 7768 Weight: 1.00 Name: BACU009367/1-1126 Len: 1185 Check: 9106 Weight: 1.00 Name: bmy_14683T0/1-988 Len: 1185 Check: 4476 Weight: 1.00 Name: ENSTTRP00000004269/1-1091 Len: 1185 Check: 872 Weight: 1.00 // 1 50 ENSP00000352185/1-1096 ---------- ---------- ---------- -MATVPVYCV C--------R ENSBTAP00000017171/1-1132 ---------- ---------- -MTSAGTEES PSGQVAILSV C--------E BACU009367/1-1126 MGRAIPGPLG ALQTPQCAHL ASAARGLADP PRLQLGLPCA VVMILGTRMQ bmy_14683T0/1-988 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004269/1-1091 ---------- ---------- ---------- -MATVPVYCV C--------R 51 100 ENSP00000352185/1-1096 LPYDVTRFMI ECDACKDWF- ---------- ---------- ---------- ENSBTAP00000017171/1-1132 LQELPVRSSL EPLPGVDLQV LPSFAGEAL- ---------- --KELLTAGD BACU009367/1-1126 LGPDTSRAQL AGDAPHPPFS RGPFAGVDVG CNFWVQSLDL ANPEQLQGSA bmy_14683T0/1-988 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004269/1-1091 LPYDVTRFMI ECDACKDWF- ---------- ---------- ---------- 101 150 ENSP00000352185/1-1096 -----HGSCV GVEEEEAPDI DIYHCPNCEK THGKSTLKKK RTWHKHGPGQ ENSBTAP00000017171/1-1132 NLFLLHFSCV GVEEEEAPDI DIYHCPNCEK THGKSTLKKK RTWHKHGPGQ BACU009367/1-1126 FVSVHDSCCV GVEEEEAPDI DIYHCPNCEK THGKSTLKKK RTWHKHGPGQ bmy_14683T0/1-988 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004269/1-1091 -----HGSCV GVEEEEAPDI DIYHCPNCEK THGKSTLKKK RTWHKHGPGQ 151 200 ENSP00000352185/1-1096 APDVKPVQNG SQLFIKELRS RTFPSAEDVV ARVPGSQLTL GYMEEHGFTE ENSBTAP00000017171/1-1132 TPEVKPVQNG SQLFIKELRS RTFPSAEDVV ARVSGSQLTL GYMEEHGFTE BACU009367/1-1126 TPEVKPVQNG SQLFIKELRS RTFPSAEDVV ARVTGNQLTL GYMEEHGFTE bmy_14683T0/1-988 ---------- ---------- ---------- ---------- --MEEHGFTE ENSTTRP00000004269/1-1091 TPEVKPVQNG SQLFIKELRS RTFPSAEDVV ARLTGNQLTL GYMEEHGFTE 201 250 ENSP00000352185/1-1096 PILVPKKDGL GLAVPAPTFY VSDVENYVGP ERSVDVTDVT KQKDCKMKLK ENSBTAP00000017171/1-1132 PILVPKKEGL GLAVPXPTFY VSDVENYVGP ERSVDVTDVT KQKDCKMKLK BACU009367/1-1126 PILVPKKDGL GLAVPAPTFY VSDVENYVGP ERSVDVTDVT KQKDCKMKLK bmy_14683T0/1-988 PILVPKKDGL GLAVPAPTFY VSDVENYVGP ERSVDVTDVT KQKDCKMKLK ENSTTRP00000004269/1-1091 PILVPKKDGL GLAVPAPTFY VSDVENYVGP ERSVDVTDVT KQKDCKMKLK 251 300 ENSP00000352185/1-1096 EFVDYYYSTN RKRVLNVTNL EFSDTRMSSF VEPPDIVKKL SWVENYWPDD ENSBTAP00000017171/1-1132 EFVDYYYSTN RKRVLNLTNL EFSDTRMSSF VDPPDIVKKL SWVENYWPDD BACU009367/1-1126 EFVDYYYSTN RKRVLNLTNL EFSDTRMSSF VEPPDIVKKL SWVENYWPDD bmy_14683T0/1-988 EFVDYYYSTN RKRVLNLTNL EFSDTRMSSF VEPPDIVKKL SWVENYWPDD ENSTTRP00000004269/1-1091 EFVDYYYSTN RKRVLNLTNL EFSDTRMSSF VEPPDIVKKL SWVENYWPDD 301 350 ENSP00000352185/1-1096 ALLAKPKVTK YCLICVKDSY TDFHIDSGGA SAWYHVLKGE KTFYLIRPAS ENSBTAP00000017171/1-1132 ALLAKPKVAK YCLICVKDSY TDFHIDSGGA SAWYHVLKGE KIFYLIKPAS BACU009367/1-1126 ALLAKPKVTK YCLICVKDSY TDFHIDSGGA SAWYHVLKGE KIFYLIKPAS bmy_14683T0/1-988 ALLAKPKVTK YCLICVKDSY TDFHIDSGGA SAWYHVLKGE KIFYLIKPAS ENSTTRP00000004269/1-1091 ALLAKPKVTK YCLICVKDSY TDFHIDSGGA SAWYHVLKGE KIFYLIKPAS 351 400 ENSP00000352185/1-1096 ANISLYERWR SASNHSEMFF ADQVDKCYKC IVKQGQTLFI PSGWIYATLT ENSBTAP00000017171/1-1132 ANISLYERWQ SASNHSEMFF ADQVDKCYKC TLKQGQTLFI PSGWIYATLT BACU009367/1-1126 ANISLYERWQ SASNHS---- ---------- ---------- ---WIYATLT bmy_14683T0/1-988 ANISLYERWQ SASNHSEMFF ADQVDKCYKC TLKQGQTLFI PSGWIYATLT ENSTTRP00000004269/1-1091 ANISLYERWQ SASNHSEMFF ADQVDKCYKC TLKQGQTLFI PSGWIYATLT 401 450 ENSP00000352185/1-1096 PVDCLAFAGH FLHSLSVEMQ MRAYEVERRL KLGSLTQFPN FETACWYMGK ENSBTAP00000017171/1-1132 PVDCLAFAGH FLHSLSVEMQ MRAYEVERRL KLGSLTQFPN FETACWYMGK BACU009367/1-1126 PVDCLAFAGH FLHSLSVEMQ MRAYEVERRL KLGSLTQFPN FETACWYMGK bmy_14683T0/1-988 PVDCLAFAGH FLHSLSVEMQ MRAYEVERRL KLGSLTQFPN FETACWYMGK ENSTTRP00000004269/1-1091 PVDCLAFAGH FLHSLSVEMQ MRAYEVERRL KLGSLTQFPN FETACWYMGK 451 500 ENSP00000352185/1-1096 HLLEAFKGSH KSGKQLPPHL VQGAKILNGA FRSWTKKQAL AEHEDELPEH ENSBTAP00000017171/1-1132 HLLEAFKSSH KSGKQLPPHL VQGAKILNGA FRSWTRKQAL AEHEDELPEH BACU009367/1-1126 HLLEAFKSSH KSGKQLPPHL VQGAKILNGA FRSWTKKQAL AEHEDELPEH bmy_14683T0/1-988 HLLEAFKSSH KSGKQLPPHL VQGAKILNGA FRSWTKKQAL AEHEDELPEH ENSTTRP00000004269/1-1091 HLLEAFKSSH KSGKQLPPHL VQGAKILNGA FRSWTKKQAL AEHEDELPEH 501 550 ENSP00000352185/1-1096 FKPSQLIKDL AKEIRLSENA SKAVRPEVNT VASSDEVCDG DREKEEPPSP ENSBTAP00000017171/1-1132 FKPSQLIKDL AKEIRLSENA SKASRPEVTA AVSSDEVCFG DREKEEPPSP BACU009367/1-1126 FKPSQLIKDL AKEIRLSENA SKASRPEVTA AISSDEVCFG DREKEEPPSP bmy_14683T0/1-988 FKPSQLIKDL AKEIRLSENA SKTSRPEVTA AIXSDEVCFG DREKEEPPSP ENSTTRP00000004269/1-1091 FKPSQLIKDL AKEIRLSENA SKASRPEVTA AVSSDEVCFG DREKEEPPSP 551 600 ENSP00000352185/1-1096 IEATPPQSLL EKVSKKKTPK TVKMPKPSKI PKPPKPPKPP RPPKTLKLKD ENSBTAP00000017171/1-1132 IEASPPRSFL EKVSKKKTPK TVKMPKPSKV PKPPKPPK-- -PPKSLKLKD BACU009367/1-1126 IEASPPRSFL EKVSKKKTPK TVKMPKPSKV PKPPKPPK-- -PPKSLKLKD bmy_14683T0/1-988 IEASPPRSFL EKVSKKKTPK TVKMPKPSKV PKPPKPPK-- -PPKSLKLKD ENSTTRP00000004269/1-1091 IEASPPRSFL EKVSKKKTPK TVKMPKPSKV PKPPKPPK-- -PPKSLKLKD 601 650 ENSP00000352185/1-1096 GGKKKGKKSR ESASPTIPNL DLLEAHTKEA LTKMEPPKKG KATKSVLSVP ENSBTAP00000017171/1-1132 GSKKKGKKCR GSASPTIPNL DLLEAHTKEA LTKIEPPKKG KATKNVLSVP BACU009367/1-1126 GGKKKGKKCR GSASPTIPNL DLLEAHTKEA LTKIEPPKKG KAAKNVLNVP bmy_14683T0/1-988 GGKKKGKKCR GSASPTIPNL DLLEAHTKEA LTKIEPPKKG KATKNVLSVP ENSTTRP00000004269/1-1091 GGKKKGKKCR GSASPTIPNL DLLEAHTKEA LTKIEPPKKG KATKNVLSVP 651 700 ENSP00000352185/1-1096 NKDVVHMQND VERLEIREQT KSKSEAKWKY KNSKPDSLLK MEEEQKLEKS ENSBTAP00000017171/1-1132 NKEVISTQND VERLEIREQT KSKSEAKWKY KNSKPDSLLK MEEEQKLEKS BACU009367/1-1126 NKEVVSTQND VERLEIREQT KSKSEAKWKY KNSKPDSLLK MEEEQKLEKS bmy_14683T0/1-988 NKEVVSTQND VERLEIREQT KSKSEAKWKY KNSKPDSLLK MEEEQKLEKS ENSTTRP00000004269/1-1091 NKEVISTQND VERLEIREQT KSKSEAKWKY KNSKPDSLLK MEEEQKLEKS 701 750 ENSP00000352185/1-1096 PLAGNKDNKF SFSFSNKKLL GSKALRPPTS PGVFGALQNF KEDKPKPVRD ENSBTAP00000017171/1-1132 PLSGNKDTKF SFSFSNKKLL GSKALKPQPG PGVFGALQNF KEDKPQPVRD BACU009367/1-1126 PLSGNKDNKF SFSFSNKKLL GSKALKPQPG PGVFGALQNF KEDKPQPVRD bmy_14683T0/1-988 PLSGNKDNKF SFSFSNKKLL GSKALKPQPG PGVFGALQNF KEDKPQPVRD ENSTTRP00000004269/1-1091 PLSGNKDNKF SFSFSNKKLL GSKALKPQPG PGVFGALQNF KEDKPQPVRD 751 800 ENSP00000352185/1-1096 EYEYVSDDGE LKIDEFPIRR KKNAPKRDLS FLLDKKAVLP TPVTKPKLDS ENSBTAP00000017171/1-1132 EYEYVSDDGE LKIDEFPIRR KKNAPKRDLS FLLDKKEPLP TPVTKPKLDS BACU009367/1-1126 EYEYVSDDGE LKIDEFPIRR KKNAPKRDLS FLLDKKEPLP TPVTKPKLDS bmy_14683T0/1-988 EYEYVSDDGE LKIDEFPIRR KKNAPKRDLS FLLDKKEPLP TPVTKPKLDS ENSTTRP00000004269/1-1091 EYEYVSDDGE LKIDEFPIRR KKNAPKRDLS FLLDKKEPLP TPITKPKLDS 801 850 ENSP00000352185/1-1096 AAYK-SDDSS DEGSLHIDTD TKPGRNARVK KESGSSAAGI LDLLQASEEV ENSBTAP00000017171/1-1132 ALYK-SDDSS DEGSLHIDTD TKPARNAKVK KDSGGSAAGI LDLLQASEEV BACU009367/1-1126 ALYKQSDDSS DEGSLHIDTD TKPARNAKVK KDGGGSAAGI LDLLQASEEV bmy_14683T0/1-988 ALYKQSDDSS DEGSLHIDTD TKPARNAKVK KDGGGSAAGI LDLLQASEEV ENSTTRP00000004269/1-1091 ALYK-SDDSS DEGSLHIDTD TKPARNAKVK KDGGGSAAGI LDLLQASEEV 851 900 ENSP00000352185/1-1096 GALEYNPSSQ PPASPSTQEA IQGMLSMANL QASDSCLQTT WGAGQAKGSS ENSBTAP00000017171/1-1132 GALEYNPNSQ PPASPSTQEA IQGMLSMANL QASDSCLQTT WGAGQAKGSS BACU009367/1-1126 GALEYNPNSQ PPASPSTQEA IQGMLSMANL QASDSCLQTT WGAGPAKGSS bmy_14683T0/1-988 GALEYNPNSQ PPASPSTQEA IQGMLSMANL QASDSCLQTT WGAGQAKGSS ENSTTRP00000004269/1-1091 GALEYNPNSQ PPASPSTQEA IQGMLSMANL QASDSCLQTT WGAGQAKGSS 901 950 ENSP00000352185/1-1096 LAAHGARKNG GGSGKSAGKR LLKRAAKNSV DLDDYEEEQD HLDACFKDSD ENSBTAP00000017171/1-1132 LAAHGARKNG AG-GKSAGKR LLKRAAKNSV DLDDYEEEQD HLDACFKDSD BACU009367/1-1126 LAAHGTRKNG AG-GKSAGKR LLKRAAKNSV DLDDYEEEQD HLDACFKDSD bmy_14683T0/1-988 LAAHGTRKNG AG-GKSAGKR LLKRAAKNSV DLDDYEEEQD HLDACFKDSD ENSTTRP00000004269/1-1091 LAAHGTRKNG AG-SKSAGKR LLKRAAKNSV DLDDYEEEQD HLDACFKDSD 951 1000 ENSP00000352185/1-1096 YVYPSLESDE DNPIFKSRSK KRKGSDDAPY SPTARVGPSV PRQDRPVREG ENSBTAP00000017171/1-1132 YVYPSLESDE DSPVFKSRSK KRKGSDDAPY SPTARVGPSV PRQDRPVREG BACU009367/1-1126 YVYPSLESDE DSPVFKSRSK KRKGSDDAPY SPTARVGPSV PRQDRPVREG bmy_14683T0/1-988 YVYPSLESDE DSPVFKSRSK KRKGSDDAPY SPTARVGPSV PRQDRPVREG ENSTTRP00000004269/1-1091 YVYPSLESDE DSPVFKSRSK KRKGSDDAPY SPTARVGPSV PRQDRPVREG 1001 1050 ENSP00000352185/1-1096 TRVASIETGL AAAAAKLSQQ EEQKSKKKKS AKRKLTPNTT SPSTSTS--- ENSBTAP00000017171/1-1132 TRVASIETGL AAAAAKLSQQ EEQKSKKKKN TKRKLAPNTT SPSASAS--- BACU009367/1-1126 TRVASIETGL AAAAAKLSQQ ---------- -----ASTTS ASTTSAS--- bmy_14683T0/1-988 TRVASIETGL AAAAAKLSQQ EEQKSKKKKN TKRKLAPNTT SPSASASAST ENSTTRP00000004269/1-1091 TRVASIETGL AAAAAKLSQQ EEQKSKKKKN TKRKLAPNTT SPSASAS--- 1051 1100 ENSP00000352185/1-1096 ---------- ISAGTTSTST TPASTTPAST TPASTSTASS QASQEGSSPE ENSBTAP00000017171/1-1132 --AGTTSAST TSASTTSAST TSASTTPAST TPASTSTASS QASQEGSSPE BACU009367/1-1126 ---------T ASASTTSAST TSASTTPAST TPASTSTASS QASQEGSSPE bmy_14683T0/1-988 TSAGTTSAST TSASTTSAST TSASTTPAST TPASTSTASS QASQEGSSPE ENSTTRP00000004269/1-1091 ---------- TSASTTSAST TSASTTPAST TPASTSTASS QASQEGSSPE 1101 1150 ENSP00000352185/1-1096 PPPESHSSSL ADHEYTAAGT FTGAQAGRTS QPMAPGVFLT QRRPSASSPN ENSBTAP00000017171/1-1132 PPPESHSSSL VDHEYTAAGT FTGAQAGRAS QPMAPGVFLT QRRPSSSSP- BACU009367/1-1126 PPPESHSSSL VDHEYTAAGA FAGAQAGRAS QPMAPGVFLT TRRPSSSSP- bmy_14683T0/1-988 PPPESHSSSL VDHEYTAAGA FAGAQAGRAS QPMAPGVFLT TRRPSSSSP- ENSTTRP00000004269/1-1091 PPPESHSSSL VDHEYTAAGA FAGAQAGRAS QPMAPGVFLT TRRPSSSSP- 1151 1200 ENSP00000352185/1-1096 NNTAAKGKRT KKGMATAKQR LGKILKIHRN GKLLL ENSBTAP00000017171/1-1132 NNTAAKGKRT KKGMATAKQR LGKILKIHRN GKLLL BACU009367/1-1126 NNTAAKGKRT KKGMATAKQR LGKILKIHRN GKLLL bmy_14683T0/1-988 NNTAAKGKRT KKGMATAKQR LGKILKIHRN GKLLL ENSTTRP00000004269/1-1091 NNTAAKGKRT KKGMATAKQR LGKILKIHRN GKLLL